Tachysurus fulvidraco (yellow catfish): 113638541
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Entry
113638541 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 2-like
KO
K11997
tripartite motif-containing protein 2/3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113638541
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113638541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
TEN_NHL
Beta-prop_IFT122_1st
zf-B_box_ZFPL1
Mala_s_1-like
DUF4456
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
113638541
NCBI-ProteinID:
XP_047658763
LinkDB
All DBs
Position
18:289303..297419
Genome browser
AA seq
666 aa
AA seq
DB search
MEAQQGSPDSSSEECTILEAFPGKGTDCSQHKGKALAFYCLLCESAVCEECVFGEHADHP
TDSLQKIVDQQQTALHESLNAAQNRLPQIRDAVLLLKDILQQLSSQKNSIEEDIHSSFSE
LHKTLDTRKSVLLMELEVTYGLKQKVLQKQLETLLREEADICSNCSQTGEALDGASEAVV
LQTHKDFGERLSELASQGLPLQPEENDQLELMMEVEGLRKSIHNLGAIITTNAVASQTEA
SGEGLEQCIVGQPTSVIITTRDKSGGLCKSGNAVISGEVFTPDGSVMDGEILDHKNGMYE
FLYTLHKEGDFSLALRLYDQHIKGSPFRLKVTNSPDDSPTTTSGANAASTGSSDGGARRR
SAKSPGSRSRQKGVRRGGSLFSTPKKKVNPIEDDLIFRIGTKGRNKGEFTNLQGVAATPG
SILIADSNNQCVQIFSNEGEFQSRFGIRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVS
IFSSDGKYKAKLGSGRLMGPKGVSVDQNGHVIVVDNKACMVFIFQPSGKLVTKFGSRGNG
DKQFAGPHFAAVNNNNEIIVTDFHNHSVKVFSAEGEFLLKFGSNGEGNGQFNAPTGVAVD
INGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGPQGLALTSDGHVVVADSGNHCFK
VYRYLQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacagcaaggttctccagacagcagcagtgaggaatgtaccattctggaggct
tttcctggaaaaggaacagattgctctcaacataaaggaaaagcccttgcattttactgt
ctgctgtgtgagagtgctgtgtgtgaggagtgtgtattcggggaacatgccgaccacccg
acagattcactgcaaaaaattgtggatcaacaacaaacagctttacatgagagcctaaac
gcagctcagaacagacttccccagatcagagatgctgtactgttgctgaaagatattctg
cagcagctaagctctcagaagaactctatcgaggaggatattcactcttcctttagcgag
ctgcacaagaccttggatacacgtaagagtgtccttctcatggagttagaggtcacctat
ggattaaagcagaaggtactacagaaacagttagagacactgcttagagaggaggctgat
atctgcagtaactgtagtcagacaggagaggcattggatggagcaagtgaggctgttgtt
ctgcagactcataaagactttggagagcgactgagtgagctggccagtcagggacttcct
ctccagcctgaggagaacgatcagctggagctcatgatggaagtagaaggacttcgcaag
tccatacacaacctgggtgccattatcaccaccaacgcagtggccagtcagactgaggct
tcaggagaaggccttgagcaatgcattgtaggtcagccaacctccgtcatcataacaacc
agagacaagtcagggggcctgtgtaagtcgggcaatgccgtcatctcaggagaagtcttc
acaccagatggcagtgtcatggatggagagattttggaccataagaatggcatgtatgag
ttcctgtacacgttgcacaaggagggggacttcagtctggcactgagactgtatgatcag
cacatcaagggaagccccttccgtctgaaggtcaccaactctccagacgattctccaacc
accacgtctggggccaacgctgcttccacgggctccagtgatggtggtgcgaggagacgg
agtgccaagtcccctggtagcaggagtcgacagaagggggtgcggagaggtgggagcttg
ttcagcacacccaagaagaaagtaaatcccattgaagatgatcttatttttagaatcgga
acaaaaggaagaaataaaggtgaattcaccaatctacagggtgtagctgctacaccaggg
agtatcctgattgcagacagtaataatcagtgtgtgcagatcttctccaatgagggcgag
tttcagagcaggtttggaattcgcgggcgaacgccagggcagctgcagaggcccactggt
gtcgctgttcatcccaatggtgacatcatcatcgctgactatgataacaagtgggtcagc
atcttctccagtgatggcaaatacaaagctaagctgggttctggtaggctgatgggtcct
aagggtgtctctgtggatcagaatggtcacgttatcgtggtggacaacaaggcctgcatg
gtgttcatcttccagcccagtgggaaacttgtaaccaagtttggcagcagaggaaatggt
gacaaacagtttgcaggaccccattttgctgcagtcaacaataataatgaaataattgtc
actgactttcacaatcattcagtcaaggtgttcagtgctgaaggggagttcctgctcaaa
ttcggttcaaacggtgaaggaaacggacagtttaacgctcccacaggtgtcgcagtggac
attaacgggaacatcatcgtagctgactgggggaacagtcgcatacaggtgtttgatgga
agtggttcttttctgtcttacatcaacacagcggcagatcctctttatgggccgcagggt
ctcgccctgacctctgatggccacgttgtcgtggccgactccggaaatcactgttttaag
gtgtaccgttaccttcagtga
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