KEGG   Tachysurus fulvidraco (yellow catfish): 113638693
Entry
113638693         CDS       T08119                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113638693 (helq)
Enzymes [BR:tfd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     113638693 (helq)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    113638693 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 113638693
NCBI-ProteinID: XP_026995909
LinkDB
Position
21:10761010..10778086
AA seq 1001 aa
MSRHAEVQSEIVIKRSSWSKKRSRDTGMRSDLTPAKKRLSAEHCKPAEDRNKELQIKIED
RVPEQCCSDSEDLFDGYDSIIADTSFLAKLEDFEQDQAPQTSKSSQNIDHLTDVVDNFHD
SSLRDLPSSQLAFQQDEQNKSPPAHTGGTGNTPVPKKRCFDPISTDQNKPTGKARRSMAD
QLKRAMLENATSSNTISKAVLQKEAAVSEEISAAVQTIKYAPQEGDLGPFFGLPSKVKDL
IKRLKRIEDLYEWQKVCLNLDSVIHRKNLIYSLPTSGGKTLVAEILIFKEILCRKKDALL
ILPYVSLVQEKVRGLSSFGIELDFLVEEYAGSKGKFPPVKRRSRNSLYIATIEKGHSLVN
SLIETSRLDNIGLVVVDELHMLGDGSRGAILEMTLAKLLYISKSTQIIGMSATLGNVADL
LSFLKAENYTNDFRPVQLKEYVKLRDSIYEIDPKEEHCFCFSRVLNFKYSSGMQKLDPDH
IIALVTEVIPQQSCLIFCATKKNCENIAGMICKYLNKDFLKHREEEKATLLSELRNSGNG
ALCPVLQKTVPFGLAYHHSGLTSDERKLLEEAYSSGVLCLLACTSTLAAGINLPARRVIL
RSPYVGADFLKRSQYKQMVGRAGRAGIDSMGESIVILQDKDKERVKELVCAPVENCYSNL
LHDGSHGLLSLILSLIGLEITCTVEQVLEFMSRTLLSIQETRLCLQKSLSKLTVESIEIL
NQKGLITMASHEQSVLRVTKLGRATYKGSVDLRYSDILYRDLSKGLEGLLLNSFLHLVYL
VTPYDMVSQIKPEWMIYFSQLTKLSAAEQKMAATIGVPESFLVRKAAGQSVRKSIDPAVV
NRLYLALVLYSLLNETNVWNVSDRFQLTRGLIQTLVSSASAFCSCVLHFTEELEEFWAYK
ALLTELTRRLTYCVQAELIPLMEVTGVMEFRAKQLYNAGYKSLAHLANADPNVLVKTVEN
LFKRQANQIVASAKMLLQEKAEALQEEVDELLMFPPDLPSA
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgagtcgacacgcagaggttcaaagtgaaatagttataaaacgcagctcatggtccaaa
aagagatccagagatacaggaatgcggagcgatttaactccggctaagaagcggctcagt
gcagaacattgtaaaccagccgaagatagaaataaagaactacagatcaagatagaagac
agagtcccagagcagtgctgcagtgacagtgaagatctctttgatggctatgacagcatt
atcgctgacacctccttcctcgccaagctggaagattttgaacaggatcaagcaccacaa
accagcaaaagctcacagaacatcgatcatctcacagacgtcgtggacaatttccatgat
tcatcactgagagatttaccgagctctcaacttgcatttcagcaagatgagcaaaataaa
tctcccccagcccacacaggaggaaccgggaacacgcctgttcccaaaaagagatgcttc
gatccaatctccactgatcagaacaaacccacaggcaaggccaggagaagcatggctgac
cagctgaaaagggccatgctggaaaacgctacttcttccaacaccatttcaaaggctgtt
ctgcagaaagaggcagcagtgagcgaagaaattagtgcagccgtgcagactatcaaatat
gcgccccaagaaggagatttgggtcctttctttgggcttccatccaaagttaaggattta
atcaagagattgaagaggattgaggacttgtatgagtggcagaaggtgtgcctgaatttg
gactcagtgatccacagaaagaatttgatctactctcttccgacgagtggagggaagaca
ttggtggctgagattcttattttcaaagagattctctgtaggaagaaagacgctctgctg
atattaccatatgtatccttggtgcaagaaaaggtacgtggattgtcaagttttggtatt
gagctggacttcttggtagaggagtatgctgggagtaaagggaaattccctcctgtgaaa
agacgaagcaggaattcactttacattgctacaatagagaaaggtcacagcctagtgaac
tcgctcattgagacaagcagactggacaacatcggcttagtggtggtggatgagctccac
atgcttggagacggcagcagaggagcgattctcgagatgactctggccaaattactctac
atcagcaaaagcacacaaatcattggaatgagtgcaactctgggcaacgtagcagatctc
ctgagtttcctgaaggctgagaactacaccaatgacttcaggcctgtccagcttaaggag
tatgtgaaactgagggacagtatatatgaaatcgatcctaaagaggagcactgcttctgc
ttctcacgtgtgctgaattttaagtactccagcgggatgcagaagctggatccggaccac
attattgctctggttactgaagtgatccctcaacagtcctgtttaatattctgtgccacc
aagaagaactgcgaaaacatagctggtatgatctgcaagtatctgaataaagacttcctc
aagcacagagaggaggagaaagcgactctgctctccgagctgaggaacagtgggaatggt
gcgttgtgtcccgtgctgcagaagaccgtgcccttcggcctggcgtaccaccacagcggt
ctgaccagtgatgaaaggaagctgctggaggaggcctactcatccggagtgctctgtctc
ctcgcctgcacctccaccctggctgcgggcatcaatctccctgctcgcagggtgatcctg
cgctccccatacgtgggagcagacttcttaaagaggagtcagtacaagcagatggtggga
agagcaggtcgtgctgggattgattcaatgggtgagagcatcgtcatcctgcaggacaaa
gacaaggagagggtcaaagagctagtgtgtgcaccagtggaaaactgttacagcaacctg
ttacatgatgggagtcacggccttctaagtctcattctctccctcattggccttgaaatc
acatgcactgtggagcaggtcctggagttcatgtccaggactttactcagcatccaggaa
actcggctttgtctgcagaagagtcttagtaagcttacagtggagtctatagagatactg
aatcaaaaggggctcatcaccatggcttctcacgagcaatcggtgctgcgtgtcaccaaa
cttggaagagcaacatataaaggctcagtagatctgagatactcggacatcctctacaga
gacttgtctaaaggtctggagggtctgctgctgaacagttttctgcatttggtgtatctg
gtcactccatatgacatggtttcccagatcaaaccagaatggatgatctacttcagccag
ttaacaaagctgtctgccgctgaacagaagatggcagccactattggtgtgcctgagagc
ttcctcgttcggaaagcagctggacagagtgtgaggaagagtatagaccctgcagtggtg
aacagactgtacctggctctggtgctttattctctgctgaatgagacgaatgtgtggaac
gtctcagacagatttcagctgacgcgaggcctcattcagaccctcgtcagttccgcctca
gccttctgctcctgtgtgctgcatttcactgaggagctggaggagttttgggcctataaa
gctcttctcactgagctgacccgcagactgacctactgtgtacaggctgagctcattcca
ctgatggaggtcactggagtcatggagttccgtgccaagcagctgtataatgctgggtat
aaatctctggctcatctggccaacgctgacccgaacgtgctggtgaaaactgtggagaat
ctttttaagaggcaagcgaatcagattgtggcctcagcaaaaatgctgttacaggagaag
gcagaagctctgcaggaggaggttgacgagctgctgatgttccctcctgacctcccgtct
gcctaa

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