Tachysurus fulvidraco (yellow catfish): 113638809
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Entry
113638809 CDS
T08119
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04517
IgSF CAM signaling
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113638809
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113638809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113638809
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113638809
Intermediate filaments
Intermediate filament-binding proteins
113638809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
YdjO
Motif
Other DBs
NCBI-GeneID:
113638809
NCBI-ProteinID:
XP_026996063
LinkDB
All DBs
Position
13:complement(10276199..10359318)
Genome browser
AA seq
2564 aa
AA seq
DB search
MANAATDLDNAEAQRQLNNNNRPSSTGFWESETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIQRYEALASDLLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWEKLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMGTV
MELAVEMESEGYYDIRRIMLRKDNILKQWDLLKELVTARKIRLEKNLALQKTFQEMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLQKHTLQEADITVQAERVQTLNAAALKFTTIDGYQ
PCDPQVICNRVNHVSTCLEELKQLAAERRTELDDSRELWVFFQEVEECECWMREKISILN
TQSCGKDLSSVLKLLQKHKSLAGELLARRALLQQTMKKGKQIVTQKRLHSAEINDKLMEV
KEDWKILEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDTYRLVSSDDFGHDEFSTQSL
LKKHIRVRDEVDKHRQNVIALRKHAVVLPLHYGELEEVKERIQEVERVYSEVAEVAVMRQ
QWLNDALAVYRMFSEVNACELWIDEKEKWLNKMDVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNLIVQQLLDGAHPSSTEVRGCQDHLNSRWNHLVELVEQKKDHLDSILHIQNYLL
ECSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQDAEDL
TTTQPHKAEDILIPFEGVSVEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASTELPESLDEAERLINLHAALNEEIRSYEEDFERLQAVRELLDSEDSLVANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRE
VAQQWLRKLSDQWELQRFLQDCHELGDWVMEKMLMVGDSTCDDTQQLHKKWLKHQTFMAE
LTQNKEWLDKIQKEGERLIVEKPELSTTVQRKLSEIRECWLDLENSTQAKALQLFENDRA
QQIAQNYSRLNERVQQLELQLIHCDHGHDLTSVNKQLKKLQVMERQMEEWCNEVCDLQLQ
SSSLPEEYVITDKVSERQAEAEARIIHLIEHLKERRRILLASKEVHQVRRDLQDEIMWVQ
ERLPLVTSQESGSSLQAVQQLMKKNQSLQRELESHRGHLEEVMDRATMFSSVRTSEAEYV
SALMEDLHSLWGTLWAETERKQLHLDSMYQAQQYYSDIVEVEAWLSEQELHMMNEEKGKD
ELSTLQLLKKQISLEQTIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSL
KDLVEERKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFSEI
ASETGSVGQERVMAVNQMVDELIDYGHADAAVIAEWKDGVNESWAELMELMETRAQMLSA
SHQLHKFFTDCREVITQIADKHRRLPEVRDGQDGTTNTSSLQRLMNTFEQDIQLLVGQVR
QLQENAAQLCTVYAGEKAEAIAMQEYEVMQAWKELIMSCEECRVHITTASDKLRFFSVVR
DQMIWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARNKSMVQCIEMGKTLLAAR
NPAAEEIKEKLEKVLAKQRELTEKWDKHWQELQHMLEVHQFAQEAAVAESWLSSQETFLV
SQELGGSVDEVEQLIHRHEAFRKAAASWEERFSSLRRLTTVEKMKAEQSKLPPTPLLGRK
VFLDPQDSSPARSSPSSLHKQTIYEQGDYWSERNMSQPSPPPGSRRIVSTVSNYTPIVSA
SVTPRIQEVRTTAVLGVAAGLGMPTELKCTQIKPIRETVRPQIDVNVMAEVVLQEPGCSG
GSRSELQVEQQRPHVKDLRMERQLSNEQLIQARRDELPQEVWRERAERERRLERQTSSEQ
EVYETRKKDRHRLERQESSEHETAKEPTDRRSGGGEKRSTLADIVEQLQEREAAQARGEI
PRLPNGVPEKSSRSDRPRARDRPKPRRRPRPKDGAQGETRRSRSAPAQSSSSVPQPPSHH
AQREGFLFRKLDIESQKKSSNSRSWVNLYCILNKGEIGFFKDSKNTTSAYNNEPRLSMSN
CSCDINLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKGWISSISMSINEHEEIAKWGQSH
PTTSSTDEGTRREGSRAEKSDRADRGSERSDKGEKMEKKSGKKK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgctgctacagatctggacaatgccgaagcccagagacaattaaataacaac
aaccggcctagcagcacaggattctgggaaagcgaaaccactagtgctaaactgtttgaa
tgctcacgcattaaagcactagcagatgaaagggatgcggtacagaaaaaaaccttcact
aagtgggtgaactctcatctggctcgcgtctcctgccgtatctctgacctgtataatgat
ctgagagatggttacatgctcaccaggctcctggaagtgctttcaggagaactactgccc
cgacctacaagaggcagaatgcgaatacactgtctggagaatgtggacaaagccctgcag
ttccttaaagaacagagagttcatctggagaatgttggatctcatgatattgttgatggc
aaccatcgccttacactcggccttatttggaccattatccttcgcttccagatccaagtg
attaaaattgagaccgaggacaacagggagacacgctcggccaaagatgcgctgttactg
tggtgccagatgaaaacagcagggtatcctgaagtaaacattcacaacttcaccacatgc
tggagagatggattggcttttaatgcccttattcatcgtcacaggcctgatttgattgaa
tttcacaagctgaccaggtcgaatgctacacataatctgcagcaagccttcaatatcgct
gagcagagtctcggactcaccaaacttcttgatccagaggatgtgaacacagagaatccg
gatgagaagtctattataacatacgttgtgtcctactaccactacttctccaaaatgaaa
gctcttatagtagaaggaaaaagaattggaaaggtgttggataatgccatagaagctgag
aagattattcagcgttatgaagctctggcctcagatctgttggagtggattgaaaaaacc
attagcatcattagcaaccagaaatttgctaactctctgacaggagtgcaacaacagctg
caggctttcacaacctactgcactattgagaagccaataaaattccaagagaaagggaac
cttgaagtgctgctctttaccatccaaagcaaacttagagccaacaaccagaagccatat
gtgcctcatgatgggaagctcatttctgatatcaacaaggcatgggaaaagcttgagaag
gcagagcatgaaaggggtgtggctttaaggaaagagctgattcgtcaggagaaactggag
ctacttgctcagcggtttgatcacaaaaccaccatgagacaggcgtggcttaatgagaac
cagaggcttgtttcccaggataattttggctatgatctgccagcagtggaggcagcaatg
aaaaagcatgaggcaatcgaggcggacatctcgtcatatgaggagcgcatgggtacagtg
atggagctggccgtggagatggagagtgaaggatattacgacatcagacgcattatgctt
aggaaagacaacattctaaaacaatgggatctattgaaagagcttgtgacagccagaaag
attcggctggagaaaaacctagcactgcaaaaaaccttccaggagatggtctacatgatc
gactggatggaggagatgcagatgaaactgctctctaaagactttgggaaacacctgctg
gaagtagaggatctgcttcagaaacacacgttacaggaggctgatatcactgtacaggca
gagcgtgtgcaaacacttaatgccgctgcacttaaattcaccaccattgatggataccag
ccatgcgaccctcaggtgatttgtaatcgtgtaaatcatgtaagcacttgtctggaggaa
ctgaaacagctagcagctgaacggcgcactgagctagatgattctcgggagctctgggtt
ttcttccaggaagtagaagagtgtgagtgctggatgcgtgagaagatctcaattttgaac
acacaaagctgtgggaaagatctgagcagcgttttgaagctcctgcagaagcacaagagc
ttagctggtgagctgttagctcgacgtgcacttctccagcagactatgaaaaagggaaag
caaattgtcacacaaaaacggttgcactcagcggagataaatgacaagttgatggaggtg
aaggaagattggaaaatattggaagaccaagctgcaatgagacttggccacctgcaggag
gcactggatttctttcagtttagtgcagaaatggatgatcagttagcatggcttcaagat
acgtacaggcttgtctccagtgatgattttggtcacgatgagttttctacacagtcgctg
ctaaagaaacatatacgtgttcgtgatgaggtggacaagcaccggcaaaatgtcatagca
ctccgtaaacatgcagttgtgttgccactacattatggagagctagaggaagtgaaggaa
aggattcaggaagtggaacgtgtatatagtgaagtggcagaggttgcagtgatgcggcag
cagtggctgaatgatgctcttgctgtctaccggatgttcagcgaagtgaacgcatgtgag
ctgtggattgacgaaaaggaaaaatggctgaacaaaatggatgtccctgagagacttgag
gatgttgaggtggtcgctcacaggtttgaaagcctggaccaggagatgaacagcttgatg
ggaaggatcctggatgtgaatcttattgttcagcagctcctggatggtgcccatcccagt
tccaccgaggttagagggtgtcaggatcacttgaatagcaggtggaaccatctggtcgag
ctggttgagcagaagaaggatcatttggactcaatccttcacatccagaattatttactt
gaatgcagtgagattaaatcacagattcaggaaaaacgcaaagccattgatgctacgcaa
tattcaggcagcgatctgggtagcgtcttagcactgcagcggcgtttgtctactatggag
ggagctcttgctgttctagagcccaaactcattcatttgcaacaggatgcagaagacctt
acaaccacccagccacataaagcagaggacatcctgattccatttgagggtgtgagtgtg
gaatgggatgaattgaaacgtacgcttcagggttgtgaggactcattgactgtagctggc
cggctgcagcagttcattcaggatttggattctttcttgacctggatggtgcaaaaacag
acagaagcagcatctactgagttgcctgagtcgttggatgaggctgagaggcttatcaac
ctccatgcagcacttaatgaagaaattcgcagctatgaggaggattttgagcggctacag
gctgtgagggagctgctggactcagaagacagtctagtagcaaatgctgcgctacaccag
tggctccaaaaacttagcgcagggtggaacaagctgctacagatgtgggagagcagaagg
gatgaactagtgcaggcacacatctaccatctttttatgaaagatgtcaagcaggctgaa
gccttcctcaacaaccaggaatcatcattggctcatgtggagctccctaccacagtggaa
acagtggaagcagccattaagaaacataaagagtttagtatggcgatggagctcaatctg
caccggatcaaagctgtgattgaggcaggagagagtctgatcagccagaacaacatctac
tctgaacgcatccgagatcgggtggatttactcattaccagagggaatcagaaccgtgaa
gtggcacagcagtggctcagaaaacttagcgatcagtgggagctgcagagattcttgcag
gactgtcatgagctgggtgattgggtgatggagaagatgctaatggtaggtgactctact
tgtgatgacactcagcaactccataagaaatggctaaagcaccaaacattcatggctgaa
ctcacacagaacaaagagtggctcgacaaaattcaaaaggaaggtgagcggctaatcgtg
gagaaaccagagctgagcaccacggttcaacggaagctcagtgagattcgtgagtgttgg
ctggacctggaaaactcaacgcaggccaaagcactgcagctgtttgagaatgaccgtgca
cagcagatcgcacaaaattactctcggttaaatgaacgtgtgcagcagctggagctgcag
ctaatccactgtgaccacggccatgacctcacttccgtcaacaagcaactcaaaaagctc
caggtgatggaacgacaaatggaggagtggtgtaatgaagtgtgtgatctgcaactgcag
tcctcctctctgccagaggagtacgtaatcacagacaaggtgtctgagcgtcaggctgaa
gcggaggcacggatcatacatctcatcgagcatctgaaggagagacgaagaatcctgctt
gcctccaaggaggtgcaccaagtgcgccgtgacctgcaggatgaaattatgtgggtgcaa
gagcgacttccattagtgacatcacaggaatctgggagtagtttacaggccgtgcagcag
ctcatgaagaaaaatcagagcttgcaaagagagctggagagccaccgggggcatctggaa
gaggtgatggatcgagcaactatgttttcatcagtgcgcacgtctgaggcggagtatgtg
agcgcattaatggaggatctccacagtctgtgggggacattgtgggctgagacagagcgt
aaacaattgcacttagactctatgtatcaagctcaacagtactacagtgacattgtggag
gtggaggcgtggcttagcgaacaagagctgcatatgatgaatgaggagaaaggaaaggat
gaattgagtactctgcagctgttgaaaaaacagatatctttagagcagacaattgaagat
tatgctgaaaccattggccttttatcacaacagtgcagacaactactggagcttggccat
cctgacagtgaacagatcagtaaacgtcaatctcaaattgaccggctctacgtgtctttg
aaggacttagtagaagagcggaagtgccggttggaacagcagtactggctctttcagctc
catagagaggtggaagaactggaacagtggattgctgagcgagagatctcagctagctcc
actgaacttgggcaggactatgaacatgtcacgatccttcaggaaaagttcagtgagatt
gcctcagagacaggaagtgtgggccaggagcgagtgatggctgttaatcagatggtggat
gagttgattgattatggccatgcggatgctgctgtcattgctgagtggaaggatggagtg
aatgaatcatgggctgaactgatggagctgatggaaaccagagcacaaatgctatctgcg
tcgcaccagcttcacaaattctttaccgactgcagagaagtgataacacagatagctgat
aaacaccggagattaccggaagtgagagacggccaggatggcacaacaaacactagctca
cttcagagactcatgaacacatttgaacaggatatccagctattagttgggcaggtgaga
cagttacaggaaaatgctgctcagctttgtaccgtttatgcaggagagaaggcagaagcc
attgccatgcaggaatatgaagtgatgcaggcatggaaggagctgattatgtcctgcgag
gaatgccgtgtgcacatcaccactgcatcggataaactgcgatttttcagtgtagtgcgt
gatcagatgatatggatggacagcatcatttgtcagataggaacaggggagaaacccagg
gatgtctcctctgtcgaggtgctcatgaactaccatcagagcctgaagagtgaagtggaa
gcacgaaataagagtatggtgcagtgtattgagatgggaaagacactactggctgcaaga
aacccagcagcggaggagattaaagagaaactggagaaagttctggccaaacagagagag
ctgacagaaaaatgggataaacactggcaggagctgcagcacatgctggaagttcatcag
tttgctcaggaggcggcggtcgccgagtcatggctctcatctcaggagacatttctggtc
agtcaggaactcggtggcagcgtagacgaagttgagcagctcattcaccgacacgaggcc
ttcaggaaagcagcagcatcctgggaagagagattcagctcattacgccgccttactacg
gtggagaagatgaaggcagagcaaagcaagctgcctccaacacccttgctgggtcgcaag
gtatttttggacccccaggattcatctccggcacgtagcagcccttcatcacttcacaaa
cagaccatttatgaacagggggactactggagtgagcgaaacatgtctcagccatctcca
ccacccggctctcggagaattgtctccacagtatcaaactacacaccaattgtaagtgca
tcagtcacaccccgaattcaggaggtaagaactactgctgtcctgggggttgctgcaggt
cttggaatgcccacagaacttaaatgtactcagataaaaccaattcgcgaaacagtgcgc
cctcaaatagatgtgaatgtaatggcagaggtagtgcttcaggagcctggatgcagtgga
ggcagtcgttctgaattacaggtggagcagcaacgtcctcatgtgaaagacttgcgtatg
gaacgtcagctttctaacgaacagctgattcaggccaggagggatgagcttccacaggaa
gtatggagggaaagggcagagagagaaagaaggctagaaagacagacatccagcgaacag
gaagtgtacgaaacacggaaaaaagaccggcaccggcttgagagacaagaaagcagcgaa
catgagacagccaaagaaccaacagacagacgatcaggaggaggagagaaacggtctact
ttagctgacattgtggaacagcttcaagagagagaagctgcacaggctcgaggagaaatt
cctcgccttccaaatggagttccagagaaatcatcaaggtcagatcgaccccgggctcga
gatcgaccaaaaccacggagacggcctcgtcccaaagacggggcacagggtgaaacgcga
cgttcacgatcagctccagctcaaagcagctcatctgtcccccagccaccttcccatcat
gctcagcgtgaaggcttcctcttccgcaagttagacatcgagagccagaagaaaagctct
aacagcagatcttgggtgaatctgtactgcatactgaataaaggtgaaattggtttcttc
aaggactcaaagaacacaacgtctgcatacaacaatgagccacgtctcagtatgagcaac
tgctcctgcgacatcaaccttggctacaagaagaagaaaaacgtcttcacacttaaaact
aaagatgggagcgagttcctgttccatgctaaagatgaggatgatctgaaaggctggatc
tcgagtatctccatgagtattaatgaacatgaggaaattgctaaatgggggcaatctcat
ccaactacctcatctacagacgagggcacacggagggaaggcagcagagctgagaaatca
gacagggccgatcgcggctctgaacgctcggacaaaggcgagaaaatggagaaaaagagt
ggaaaaaagaaatga
DBGET
integrated database retrieval system
