Tachysurus fulvidraco (yellow catfish): 113638814
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Entry
113638814 CDS
T08119
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113638814
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113638814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF_3
TB
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
113638814
NCBI-ProteinID:
XP_026996073
LinkDB
All DBs
Position
13:10185630..10242246
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AA seq
1740 aa
AA seq
DB search
MFRTLILLLCCVSALLHVSPAAERIKVLFTPTICRQRCTNGQCINYCERGNITTLYSNED
ATNTSGFRVFLCPMLCKNGGVCIQKDRCLCPANFTGKFCHIPVSSSSTTSNEIEKLPPSG
TFPARQGLMRSEYLLPLQSRQQNQTNGSPLVTVRVHHPPDVTVKIHQVMKVTSSSSSETV
ARSSSLSGSHGSIEHSSTFLADRAEAPRALVQAQTFRGDSIYTEASGFKYCFREVRNGQC
SSPLPGLRSQETCCRGDGLAWGIKECTLCPPISGSGTNGEKSCPKGFERVNGTQCVDINE
CLQPGFCENGKCVNTRGSYSCVCKPGFLLDASHGLCISQKVISEEKDQCFRIVSQGFCSM
PILKNITKQICCCSRVGKAWGRKCEACPYFGSVEFKEICPAGPGYHYSPNTLKLNPRVAE
PHRPALVSQINRTSTTVTRYDTSLLQSTTRNEPPHNQRPTRPQSPTISHNVKIQQSSTGQ
RQPLTSEVFIIQSEPQLSQHRQTGGLASSTSQPSRERPFVIRTHTSRPSIIRQHYSEFGP
LRVPATVRPPPPITGLSPEKWTWDKRACEANPQVCGPGRCVDMPGGKHTCHCNPGFILNS
QAGHCQDINECLLSPRPCLSGHCENTLGSFQCVCPSGYQTNAQKNLCTDIDECRLIPNPC
VNGRCENTHGSFRCVCRTGYKLQNNTCTDIDECDDSLRCPGKECVNTQGSYNCVSCKPGF
GLLNGQCSDIDECRQRPSLCSSGRCENTPGSYRCVCNKGFKLQGNICTDVNECEDSLQCP
GQGCINTLGSYRCVSCEPGFELTNRRCTDIDECRQFPAPCANGRCENTPGSYKCVCHTGY
KIQDNKCTDINECENHLQCRGQVCVNTPGSYRCRSCGAGFSFHNGQCTDVDECAQNTHRC
ANGRCENTPGSFQCVCQPGYRLESNACIDVDECENKLQCPGQKCVNSVGSFKCVSCSPGF
EVINGQCQDVDECSHTPSPCSNGRCENSPGSFMCVCRSGFKLQGNTCTDVDECESSGICG
AMSKCVNTDGSYRCECLPGFRAAGPGRQCRDINECLEDEFCFPKGECVNTDGSYMCVCSQ
GYYTSANGTLCLDVDECTRDGVCEDGRCKNTDGSFTCDCKSGFTANPEKTACLDVDECVD
SDGSVCGSQRCENTIGSFRCFITCEPGYSLTATGECVDINECANKSVCGQHMFCRNLIGT
YQCICDQGYETTPDGRSCVDINECAVMVGVCGAARCWNVEGSFMCECEKRQEEFDPLTRQ
CVTTGSGSESLSHLPQPGEQIECYFNVDQRDQCAVLSSNTTVQECCCTVGRAWGLKCQYT
FCPQAGTSEFQAMCPNGRGYVTSAVGAFGYRDVDECKLFDPDVCKGGVCVNNIPGYSCYC
PSGYYYDMDLLECIDNDECESGDMCPGGVCVNTLGSYYCTCEPPLVLDDTQRSCVNNSGL
TVDENLSFCWQHVTADLVCQRLLRGIQVTFTECCCLYGEAWGLQCALCPRRDEEEYESMC
TSFGPPPNSPRYAERFAPLPGGGGGYGTPYGEVIYQELPRTSDYDYYSVGTGRRPGLRTR
PADSYTPFVPPGLGSRRYYEEEDYDSAAAPPFAPDPRNERFYGSRFSTGLLTEGDEDEES
WRDTAPLPPFTDRRPGSERPQRVYERRYESFAGLPEDECGILQGCENGRCVRVGEGYTCD
CYDGYQLDISSMTCLDVDECEDPTFPECRNAQCVNTEGSYRCVCLRGFIASRRPNYCIPA
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacactgattttgctactgtgttgtgtgtcagcactgctgcatgtgtctcca
gcagccgagaggattaaagttctcttcacgccaaccatctgtaggcagcgctgcaccaat
ggacaatgcatcaactactgcgagcgaggcaacattaccacgctgtatagcaatgaggat
gcgacaaacacatctggctttagagtgtttctgtgccccatgttgtgtaaaaacggaggt
gtgtgcattcagaaagatcgatgtctgtgtcctgccaactttactggaaagttctgtcat
atccctgtgtcttcatcctccactacttccaacgagattgagaagcttccgccaagtggt
acttttccagccaggcaggggctgatgcgttcagaatatctccttcccttacagagtcga
cagcagaaccaaaccaacgggtctcctctggtgactgttcgagtgcatcatcctcctgat
gtaacggtgaagatccaccaggtgatgaaagtcacttcaagttccagctcggagacggtg
gcacgatcatcaagcctctcaggttcccatggcagcattgaacatagcagcacatttctg
gcagacagagcagaagctccacgtgctcttgtccaggcccaaactttcaggggagattct
atctacacagaggcttctggatttaaatattgctttagagaagtccgcaatggacagtgt
agttctcccctgcctgggctccgcagtcaggaaacgtgctgcaggggagatggtttagca
tggggaataaaagagtgtacactctgccctccaatatcaggaagtggcacaaatggagag
aaaagctgtccgaaaggctttgaaagggttaatggtacacagtgtgtggatattaacgag
tgcttgcagccgggtttctgtgagaacggcaagtgtgtgaacacccgtgggagctacagc
tgtgtttgcaaacctggcttcttattggatgcctcacatggcctctgtatctcccagaag
gtgatttcagaggagaaggatcagtgtttccgtattgtctctcagggcttctgctctatg
cccattctgaagaacatcaccaagcagatctgctgctgcagtcgtgtcggtaaagcctgg
ggaaggaaatgtgaggcctgcccatattttggatctgttgaatttaaggagatttgtcct
gctggtcctggctaccattactcacccaacaccttgaaattgaatccaagggttgctgaa
ccacacagacctgctctggtttctcagatcaatcgcacttcgactacagtgactagatac
gatacatcattattacaatcaacaacaagaaatgagccgccacataaccaaagacctaca
agaccccaatctccaactatcagccataatgtcaagattcagcagtccagtactggtcag
agacaaccacttacatcagaagttttcatcattcagagtgaaccacagctaagtcagcac
agacaaacaggagggcttgcttcatcaactagccagccaagcagggaacgtccctttgtt
attaggacccacacaagcaggccatcgattatcagacagcattattctgaattcggacct
ctccgagttcccgcaacggtccgtccacctccacccataacagggctttctcctgaaaaa
tggacatgggataaacgtgcatgtgaagctaaccctcaggtttgtgggccgggtcggtgt
gttgatatgcctggaggtaaacacacatgtcattgtaatcctgggttcatcctcaattct
caagcaggtcattgccaagatataaatgaatgtttgttgtctccaaggccgtgtttgagt
ggtcactgtgagaacacactgggaagttttcagtgtgtgtgtccttcaggttaccagact
aatgcccaaaaaaacctttgcacagatattgatgagtgtcgtctgatccctaacccttgt
gtaaatgggcgctgtgagaacacacacggcagcttcaggtgtgtgtgcaggacaggatac
aaactgcaaaacaacacctgcacagacattgatgagtgtgatgactcactccgctgccca
ggaaaggagtgcgtaaacactcaaggttcctacaattgtgtgtcctgcaaacctggattt
ggtctccttaatggccagtgctcagatattgatgaatgtcgtcagcgtccatctctttgc
tctagcggccgctgtgagaacacacctggcagctacagatgtgtgtgtaataaaggtttt
aagctacagggtaacatctgcacagatgtgaatgaatgtgaggactctctgcagtgccct
ggtcagggatgtattaatacactgggttcatatagatgtgtgtcttgtgaacccgggttt
gaattaaccaaccgaagatgcacagatatcgatgagtgtcgtcagtttcctgccccatgt
gccaatgggcgctgtgagaacacacctggcagctacaaatgtgtgtgtcatacagggtac
aagattcaagacaacaaatgcacagatataaatgagtgcgagaaccacctgcagtgtcgt
ggtcaggtgtgcgtcaacactccaggttcataccggtgcaggtcatgtggagctggattc
agctttcataatggacaatgcacagatgtggatgagtgtgctcaaaacacacatcgttgt
gctaatggacgctgtgaaaatacccccggaagtttccaatgtgtgtgtcaacctggatac
agattggaatcgaatgcctgtatagatgtggacgagtgtgagaacaagcttcagtgtcca
ggacaaaagtgtgtgaattcggttggctctttcaagtgtgtttcatgcagtccaggcttt
gaggtcattaatggccagtgtcaagatgtggatgagtgcagtcacactccttccccatgc
tctaatggccggtgtgagaacagtcctggaagcttcatgtgtgtgtgtcgctctggattc
aaactgcagggaaatacctgcactgatgttgatgaatgtgagagctctggaatatgtggg
gctatgagtaagtgtgtgaacacagacggatcatacaggtgcgaatgtttgcctggtttc
cgtgctgcaggacctggacgccagtgccgagacattaacgaatgtttggaggacgagttc
tgcttccctaaaggagagtgtgtgaatacagatggttcatacatgtgtgtgtgctctcag
ggttactacacaagtgccaatggaactctctgtcttgatgttgatgagtgtacccgggat
ggagtctgtgaggacggacgctgcaaaaacactgatggctcatttacatgtgactgcaaa
tctggtttcactgcgaatccggaaaaaacagcctgcttggatgtggatgagtgtgtggac
tctgatgggagtgtgtgtggttctcagcgctgtgagaataccatcggctcgtttcgctgc
ttcatcacctgtgaacctggatacagcctcacggcaacaggagagtgtgtggacattaac
gagtgtgcaaacaagagtgtttgtggccagcacatgttctgtaggaacctgattggtaca
tatcagtgtatttgtgaccaggggtatgagacaacaccagatgggcggtcctgtgtggac
attaatgagtgtgcggtgatggtgggtgtgtgcggagcggcacgctgttggaatgttgaa
ggttcattcatgtgtgaatgtgagaagcggcaggaagaatttgacccacttacaagacag
tgtgtaaccacagggtcagggtcagagtcattatcacacctaccccagcctggagagcag
atagagtgttattttaacgtggatcagagggaccagtgtgcagtcctttcttctaatacg
actgtacaggagtgctgctgcactgtggggcgagcctggggactcaagtgccagtacact
ttctgcccacaagctggaacatctgaattccaagcaatgtgtccgaacggacgtggatat
gtgacttctgcagtgggggccttcggctatagggacgtggacgagtgtaaactcttcgac
cccgatgtgtgtaaaggtggtgtgtgtgtaaacaacatccctggttactcgtgttactgc
cccagtggctactactacgacatggacttattggagtgtatagataatgatgagtgtgag
agtggggacatgtgtccaggcggtgtgtgtgtgaatacacttggttcatattactgcacg
tgtgagccacctctagtgctggatgacacacaacgctcctgtgtcaacaattcaggcctc
actgttgatgagaatctgtcattctgttggcagcatgtaacagctgatctggtgtgtcag
aggctcttgcgaggaattcaagtgacatttacagagtgttgctgtttatatggagaagca
tgggggcttcagtgtgctctgtgtccacgcagagatgaggaggaatatgaatcaatgtgc
accagttttggtcctcctccaaattcgcctcggtatgcagagcgttttgccccactccca
gggggaggagggggatatggaacaccatacggtgaggtcatttaccaagagctacctcgt
acatctgattacgattactacagtgtagggacaggacgcagacctggattgaggacacgc
ccggctgactcatatacccctttcgtgcctcctggtctcggctccaggcgttactatgag
gaggaagattatgactcagctgctgcaccgccatttgcaccagatcctcgtaacgagcgc
ttctatggctcacgatttagtactggcctcctcactgaaggtgatgaagatgaggagtca
tggagagacactgcccctctcccacccttcactgatagaagaccaggaagtgaaagacca
cagcgagtctatgaaaggcgctacgagtcattcgctggcttgccagaggatgagtgtggt
atactgcagggctgtgaaaatggccgctgtgttcgtgtaggtgaaggatacacctgtgac
tgttatgatggatatcagctcgatatctcctctatgacctgtctagatgtggatgagtgt
gaggatccaacctttccagagtgtagaaatgcacagtgtgtaaacacagaaggttcatat
aggtgtgtgtgtctgaggggattcatcgcatcacgcagaccaaactactgcatacctgct
taa
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