Tachysurus fulvidraco (yellow catfish): 113638825
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Entry
113638825 CDS
T08119
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113638825 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113638825 (trip12)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113638825 (trip12)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
HECT type E3
113638825 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
113638825
NCBI-ProteinID:
XP_026996098
LinkDB
All DBs
Position
13:complement(10690129..10732459)
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AA seq
2073 aa
AA seq
DB search
MSIRINHTAGGSLRRSQRNTLATRLQSEQTKQKTNSPPESKRSYTKASKAPPTPAAGSSR
GHAPRRNSLSLSSLSNPASDPDSETAGSSGQHEQREVSNNRALKRSSAPDHTTTTYSPSP
AKRPKAPPLESSEQLEPAGSTADSAPELPPSARSKKRRLAAEHPASRTLNRKSGTCPAPS
TSHKRKKTDTPFSSSSSSSFSSSSSFLSGSSSEQASRSSKPSKLASKLAASAKSVTDSAS
SSSASSSSFTSSSSSSSSVVVAGASGCAPPSQGARLKQGKDQSKSRRSRSASSPSPRRSS
RDKEHSKSSTAASKFDWTSRFSPRVNLPKPRLALPGSSKPETPSGSNKAGPSGLQAKLAS
LRKSTKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAAETRRQDKMAENDN
NQDGANSSRTEETPQGASAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLF
GPRMSQLFHRTIGTGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPV
KSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDV
AEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFH
FVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVV
TPPVLSSGMFIMVVRMFSLMCSNCPNLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVP
RSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAHTTEAAVWQWRDDRGLWHPYNRI
DSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLINPNTGHV
EVRGEDARAELMREEAELARCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFSDSE
LLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKN
LAESESFLPSPPKACTSGITAATTTITTATTPAASSVTPDLGSPSFHNNMEDSLDLSPQG
RLSDVLKRKRLPRRVPRRPKYSPPRDDDKVDNQAKSPTTTASPKSSFLASLNPKTWGKLG
AQNNSTNSEPSRTAGVSGLARTANKDSVSNNRDKIKAWIKEQASKFVERYFNSENVDGSN
PALNVLQRLCTATEQLSLQVDGGLECLVEICSIVSESDVSSFEIQHSGLVKQMLLYLTSN
SERDVVSRDERIKRFLHIFYGSPVPGQEPLFRLEPTENGSLLALVHKMNSCLSQMEQFPV
KVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIE
RYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIADHLLPYNMTV
YQAVRQFSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGCKDSVGGKRGRA
QTAPTKTSPRNAKKQDELWHDGVCPSVSNPLESYLISEPPEGITFDDPSLEVILLLRVLH
SISRYWFYLFDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCP
FFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELL
KQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLAN
PKGSQEGTKYMFSSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLG
LPFYKWMLRNESSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDKSYTREMLQQALES
LNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVVYWTLNEGVSRQFE
SFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFL
FEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTC
VNYLKLPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaggattaatcacactgcaggggggtcactgcgccgatcacagaggaacaca
ctcgccaccaggttgcagtcagaacaaaccaaacaaaaaacaaattcccctcctgaaagt
aaaagatcatatactaaagcttccaaagccccgcccacgcctgcagctggctcctcgcgt
ggccacgcccctcgacgaaacagtctctctctctcttcactaagtaaccctgcgtctgac
ccggattcggagacagcaggaagctcgggccaacacgagcagagagaagtcagcaacaac
cgtgctctcaaacgtagctctgcacctgatcacaccaccaccacctactcgcccagcccg
gccaagaggcccaaagctccgcccctcgagagctcagagcagctggaacctgctggctct
actgctgactctgcacccgagctcccaccctcagccaggtcaaaaaagcgacgtttggca
gctgagcatcctgctagcaggacattaaacaggaagagcggcacgtgcccagctcctagc
acctcccacaaacgcaaaaagacagacaccccatttagctcctcttcttcctcctcgttc
tcttcctcttcctcgtttttatccggctcgagcagcgagcaggccagccgctcatctaaa
ccctccaaactggcgtccaaattggccgcctcggccaaatccgtgactgactccgcctct
tcctcctccgcttcttcttcctccttcacttcctcttcctcttcctcctcttctgtggtg
gtcgctggtgccagtggctgtgccccgccctcgcagggcgcccggctcaagcagggtaaa
gatcagagcaagtcgcgtcgttcccgctccgcctcttcgccgtctcctcgccgcagcagt
cgtgataaagagcacagcaaatccagcacagctgcctctaaattcgattggacgagtcgc
ttcagtcccagagtgaacttaccgaagcccagactcgccctgcccgggtcctcaaaaccc
gaaacgccatcagggtccaacaaagccggcccgagcggactgcaggccaaactagccagt
ctgagaaagtccacgaagaagcgtagtgagtctccccctgcagaactccccagttttagg
aggagcacgcgacaaaagaccacgggctcctgcgccagcaccagtcggcgaggttcaggt
ttagggaagcgtggtgcagctgaaactcgccgacaggacaaaatggccgaaaacgacaac
aatcaggacggagccaattcatcacgcacagaggaaacgccgcagggagcttcagcagcc
tccagctcagtagccggcgctgtagggatgaccacatccggagagagcgaatcagacgac
tcggaaatgggccgattgcaagctctactggaggcacgtggtctgccccctcaccttttt
ggtcctcgtatgtcccagctattccatcgcaccattggcactggagcaagttcgaaagcc
cagcagctgctgcagggtctgcaggctacaggggacgagtctcagcagctgcaggcagca
atagagatgtgccagctgctggtgatgggcaacgaagagacactgggaggatttcctgtg
aagagtgtcgtacctgctctgatcacactgttacaaatggagcataactttgatattatg
aatcatgcatcccgtgctctaacctacatgatggaagctctgcctcgctcttctgctgta
gttgtagacgctattcctgtcttcctggaaaagcttcaggtgatccagtttatcgatgtg
gccgaacaggctctcaccgcactggagatgctctcacgaagacacagcaaggccatcctg
caggccggtgggttggctgactgcttgctgtacctggagtttttcagtattaacgctcag
aggaatgcattagccatcgccgctaactgctgccagagcatcacacccgacgagtttcac
ttcgtagccgactcgctgcctctactcactcagagactcacgcaccaggataaaaaatca
gtggagagcacatgtctctgtttcgcccggctggtggacaactttcagcatgaagagaat
ttgttgcagcaggtggcgtcacgcgatctgctcacgaacatccagcagcttcttgtggtg
acgccgccggtgttgagttcagggatgttcattatggtggtgcgaatgttctccctcatg
tgctccaactgccccaaccttgctgttcagctgatgaagcagaatatcgcggagacattg
cgtttcctgctttgtggagcatctaatggaagctgtcaggagcaaattgaccttgttccc
agaagcccccaggagctttatgagctcacttcccttatctgtgagctgatgccttgcctc
cccagagagggcatttttgctgtagacgccatgttgaaaaagggcagcgcgcacactaca
gaggctgcagtgtggcaatggagggacgaccgaggcttgtggcatccatacaaccgtatt
gacagtcgcatcattgagacggctcaccagaacggcgaggatgagatcagcctctcgacg
ctcggacgagtttacaccatcgatttcaactctatgcagcagatcaacgaggacacggga
acggcacggggaattcagaggaaaccaaatcctctgatcaaccccaacaccggtcacgtg
gaggtgcgtggcgaggacgcacgtgcagagctgatgcgggaggaggcagagctagcccgt
tgcttcattaagactctgtttggcgtgctgtatgaagtgtacagctcctcggccggaccc
gctgtcagacacaagtgcctcagagccatcctgcgcataatttacttctccgactccgag
ctgctcaaggatgtgctgcgtaaccacgccgtctccagtcacatagcctccatgctgtcc
agtcaggacctgaagattgtggttggctctctgcagatggcagaaatcctcatgcagaag
ctacctgatgtgttcagcgtgtacttcaggagagaaggtgtgatgcaccaggtgaagaac
ctggctgagagcgagtcgttcctccccagtccgcccaaggcgtgcacgagcggcatcact
gcggcaaccaccaccatcaccacagcaaccacacccgccgcgtccagcgtcacaccggat
ttgggatcaccgagtttccataacaacatggaggactcgctggacctcagcccacagggt
cgtctgagtgatgttttgaagaggaagcgtcttcctcgcagagtaccacggcgtcccaaa
tattctccacccagagatgatgacaaagtggacaatcaggctaagagtcccaccaccacc
gcttctcccaaatcatccttccttgcaagtcttaaccccaaaacctggggaaaacttggt
gctcaaaacaacagcactaactctgagccatctcgcacagccggggtcagcggcctcgca
cgcacagctaacaaagactccgtgtctaataacagggacaagattaaggcatggataaaa
gagcaggccagcaagtttgtggagcgctacttcaattcagaaaacgtggacggcagcaac
ccagcactaaatgttctgcagagactgtgtactgctacagagcagctcagcctgcaggtt
gatggcggtctggagtgtttagtggagatctgcagcattgtgtccgagtcagatgtgtcc
tcattcgagattcagcacagtggccttgtgaagcagatgctgctctatttaacctccaac
agtgagagagacgtcgtcagcagggacgagaggatcaagagattcctgcacattttctac
ggcagtcctgttcctgggcaggagccactgttccgtttggagccaacagaaaatgggtcg
ctgctggcacttgtgcacaaaatgaacagttgcctgagtcagatggagcagtttcctgtt
aaagtgcatgattttcccagtgggaatggtaacggcagcagaggttctcaagcactaaaa
ttcttcaacacacaccagctgaagtgccagctgcagagacacccagactgcaccaacgtg
aagcagtggaagggggggcctgttaaaattgaccctctcgctttagtgcaggccattgag
agataccttgttgttagaggatacggccgaatcagagaggaggacgaggacagcgatgac
gatggatcagacgatgaaatcgatgagtcacttgcggcacagttcctgaattctggcagc
gtgcgccaccggctgcagttctacattgctgatcacctgctgccctacaacatgactgtg
taccaggcggtgcgtcagttcagcctgcagccagaggaggagcgggagagcaccgacgac
gaggccaaccctctcggtcgtgccggcatctggaccaaaacacacacgatatggtataag
ccggtcagagaggatgaggatggctgcaaggactccgtaggagggaaaaggggtcgagca
caaacggctcccactaaaacttcaccgcgtaacgctaaaaaacaggacgagctgtggcac
gacggtgtgtgtccgagtgtcagtaacccgttggagtcgtacctcatatctgaacctcca
gaaggtattacgttcgacgacccctcgctggaggtcattctgctgttgagggttctgcac
tccatcagcagatactggttctacctcttcgataatgctgtgtgtaaggagatcattccc
actagtgagttcatcaacagtaaactgacagcaaaagcaaacagacagctgcaggatcca
cttgtgatcatgactggaaacatcccaccctggctcactgagctgggcaagacctgtccg
ttctttttcccattcgacacgaggcagatgttgttctacgtcactgcgtttgatcgtgac
cgcgccatgcagcgtctgctcgacaccaaccctgaaatcaaccagtccgattctcaggac
agccgtgtagcaccacgccttgacaggaagaagcggacgataaacagggatgagctgtta
aagcaggcagaatctgtgatgcaggatctgggcagttccagagccatgctggagattcag
tatgagaatgaggtggggacaggacttggcccgacactggagttctacgctcttgtgtct
caggagctgcagagagctgatctgggtttatggcgaggagaagaggtcactcttgccaac
cctaaagggagccaggagggcaccaagtacatgttcagctctagaggcctttttgctgtg
ccttttgggcgcagcaccaagccagctcacattgccaagatcaagatgaaattccgcttt
cttggaaaactcatggctaaagccatcatggactttagactgctggatctgcccctgggc
ttgcccttttacaagtggatgttgagaaatgagtcatcaataagctctcacgatttggtg
aacatcgaccctggtgtggccaaatccatccagcacctggaggacatcattaggcagaag
aagagactagagcaggacaaatcctacacaagggagatgctacagcaggctctggagagt
ttaaatatgaatggctgttcagtggaggatttagggctggacttcacattgccagggttc
cctaacatcgagttgaagaagggaggcaaagacatccctgtcaccatacacaatctggag
gagtacctgaggttggtggtgtactggactttaaatgagggcgtgtcccgacagttcgag
tcatttagggaaggcttcgagtctgttttcccgctccaccacctacagtacttctaccct
gaagagttggatcagttgttgtgtggcagcaaatcggagacgtgggacgtcaaaactctg
atggaatgctgcagaccggatcacgggtacacacacgacagccgggcagtgcgattcctc
tttgaggtgttgagtagttttgatgcagagcagcagagactcttcttgcagtttgtgacc
gggagtccaagactgccagtaggaggtttccggagtttgaatcctcccctgacaattgtg
cgcaagacgtttgagtcaacggagaacccagacgacttcctgccgtcagtgatgacgtgt
gtaaactacctgaagcttccggattattccagcatcgagatcatgagggaaaaactgtta
atggcggcacgggagggccagcagtcttttcacctgtcctga
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integrated database retrieval system
