Tachysurus fulvidraco (yellow catfish): 113639067
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Entry
113639067 CDS
T08119
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113639067 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113639067 (smarcd1)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113639067 (smarcd1)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113639067 (smarcd1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113639067 (smarcd1)
PBAF complex
113639067 (smarcd1)
GBAF(ncBAF) complex
113639067 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
FtsA_C
Motif
Other DBs
NCBI-GeneID:
113639067
NCBI-ProteinID:
XP_026996531
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All DBs
Position
2:complement(7589927..7611990)
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGGFQQAASGGGGGGAMGPGPPVPGGGGPGMAPGTPAGRMVPAGPQNPMYRSPMPGP
GYPRPGMPPANRMTPQGPPMGPPGYSASPVPRPGMPVMDPSRKRPAPPQLPQQVQQQQNR
NQHAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQK
RKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDP
RLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQ
RLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAG
LDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRA
EFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgaggtggtttccaacaagcggcttctggaggcggtggaggcggcgcaatg
ggaccaggacctccagtaccgggtggaggaggaccgggtatggctcctggaactcctgcg
ggaaggatggtaccagcaggaccgcagaatccaatgtatcgctccccgatgcctgggcca
ggatacccgagacccgggatgcccccagcaaaccggatgactcctcaaggcccacccatg
ggtcctccaggctacagcgctagtccagtacctcgccctggaatgccagtcatggaccca
tcacgcaagaggcctgcgccacctcagctcccacagcaggtccagcaacaacagaaccgc
aaccaacatgccaagaagaagaagatggctgataaaattctacctcagagaatcagagag
ctagttcccgagtctcaggcttacatggatctgctagcctttgagaggaagctggatcaa
accatcatgcgcaagagactcgatatccaggaggcactgaagagacccatcaagcaaaaa
cgaaagctgcgtatttttatctccaacactttcaaccctgccaagccggacgccgaggac
ggcgagggaactgtagcatcatgggagctgcgagtggaaggacggctgctcgaggacact
gctgtatctaaatacgaggccaccaagcagaaaaggaagttttcctctttcttcaagtct
ttagtgatcgaattggacaaagacctctacgggcctgacaatcatttggtagagtggcac
agaacacccactactcaggagactgacggctttcaggtgaaaaggcccggagacgtggga
gtgcgctgtactgtcctcctcatgcttgactaccagcctcctcagttcaagctggacccc
agactggcacgcatgctgggcatccatacccagaccagacccgtcatcatccaggctctg
tggcagtacgtgaagacgcacaaactgcaggacccacatgagcgtgagttcatcaactgt
gacaaatacctccagcagatctttgagactcagaggatgaagttttctgagattcctcag
cggctgcacgccctgctgatgcctcccgaaccgatcatcatcaaccatgtcataagcgtg
gacccgaatgaccagaagaagacggcttgctacgatatcgacgtcgaagtagacgataca
ctcaagacccagatgaactcttttctgctgtccactgccagtcagcaggagattgcaggc
ttggataacaagattcacgagaccattgagaccatcaatcagctgaagactcagagggag
tttatgctgagctttgcccgtgaccctcagggctttatcaacgactggctgcagtcccag
tgcagggacctcaagaccatgaccgatgtggttggaaaccccgaagaagagagaagagct
gagttctatttccagccatgggctcaagaggctgtgtgtcgctacttctactccaaggtc
cagcagaggagacaggagctggagcaagcactgggcatcaggaacacataa
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