Tachysurus fulvidraco (yellow catfish): 113639158
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Entry
113639158 CDS
T08119
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113639158
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Other basic domains
RF-X
113639158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
113639158
NCBI-ProteinID:
XP_026996683
LinkDB
All DBs
Position
10:complement(889880..908506)
Genome browser
AA seq
1548 aa
AA seq
DB search
MADDQQQHPGQLQQAALSGPPSLPGALSGLQGPEATALHYDKIKNSICKSVQSKVDSILQ
DVEKFTDIEKLYLYLKLPSGPSSGNDKRTENQRGSTSPATCDQNSMSSSRTQQMYAFNWI
RNHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKS
KYCYSGLRKKAFVHMPSLPNLDLHKSGDGCELLEPSGQSPSAEDEMRSAACGLVCEWAQK
VLSRQFDSVEDLARFLLNSHYIGTKSMAALTVMTGTPTGVKTPTPASAFVPTGDANSFHP
QMKTLPSPSVDTKQQLQRKIQKKQQEQKLTSPLPGDAQARRAEAGTPGPGSSITSGSPAL
LSSQPAIGIVVAAVPSPITVQRNRQLMTSPSPVATTEGKVLPVNFQVVTQSVKQSPKTPQ
NIPASPVGDRLARHRYAQILPKPSATSGITLRSPPTLLITNSPIKTVMPTPHVSSVNVVK
MTAISLTPNNSGGSNTPTPLRPASAGISSTVSQEESNQFQPAQNGSSATLYTSGAGRLGR
PVTTPIPSISSLSEVRLTSEAVNDSNSSAGGEKQSTAQGNNVGQKNERATKYRASSEPSL
LVKASPVPERVTRAKSDSATPPSTIIGAAVPISNNSSDHQESTLYLTVMNQNADIGSNDT
ASPPGQSLKDVSLGLKSPRKRSASVLESHVIPVKRVFISQQSLDASNNPKTSLVIATKKI
QRPGTPARPESAPCKVTLKHNSLPTQILALSDTPIGNTSQTIISSQSSSQVDIGDSSAGL
SPTDIDSCNSTSSDQTLLQQIVSQQQVTIAISQEASAVSELKSSLQDYSQQIQAEQKQVT
ASHLPLIAQAPEASAQLTLQQDIVDFDGAQASIDYFPFNDDDMTQDSIVEELVQMEEQMK
LNSSLQPYLSTLDLPLQGQSAQSTILSSHQTGTQFYHSAHSSTTPVHTPTPTPTPTPTPT
PTPTSEILPGGHSLARESPCCRVAPITPVDGILVGRHTPISTPLSNCSSSVPPSPVECRN
PFAFTPINSNIPGYHDGSVVSSSPVKPMQRPMATHPDKAKLDWINNRYNSTSGSPSVSNS
NAIGILPSYQDLVEDHFRKPHAFAKPGQSFQPQSRHQDVHLVQLTAVSPVQGQQAVENKQ
ESFAVPAPLDNKLTGCTSGAGGGTFRCRSVSPAVRQRNLSGTSVQTNSTPRSVISPFNSP
ITQEVLNILSNSHSVVTANSMAQRSQSVPLSIMMQSEMLPISQQGQQSNSAKITSVLLSK
MDGDGDDTVRGLGVNNMPSKYTARMNLTQILETTQAFSEGTNLHGQQLSVCSSPSQFDFQ
KPGFLISTGDESVTFSSDDQAQSVSGLQEQQLQLQDQQLELQDQQLLQDQQLQLQEQPLQ
LQDQQLELQDQHLQLQHQQLQLQDQQQLQHDPDLSQQQLLSQTSQQNEQQQHEHLDFNST
VKDLLGEDGLNPSSQLVGQVASELSAVASDFSSEIRLTSDLSGSINDLNTLDPNLLFDPS
QQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatcaacaacagcaccctgggcagctgcagcaggctgctctctccggaccg
ccgtctctccccggcgccctgtcagggctgcagggacccgaagctaccgcgctgcactac
gacaagatcaagaactcgatttgcaaatctgtgcaatcaaaagtggacagcattttgcaa
gatgttgagaagtttacagacattgaaaaactctacctctaccttaagttgccttctggt
cccagcagcggtaatgacaaaaggactgaaaatcagagggggtctacaagtcctgcaaca
tgtgaccagaattccatgtcatccagtcggacgcaacagatgtacgctttcaactggatt
cggaatcacttagaggagcatcctgagacctcactgcctaaacaagaggtgtatgatgag
tacaagagctattgtgacaatcttggctaccatcctctaagtgctgctgattttgggaag
atcatgaaaaatgtctttcccaacatgaaagcacgtcgccttggaatgcgaggaaaatct
aaatactgttatagcggactgaggaaaaaagcttttgtgcatatgccatctttgcccaac
ttggacttgcataaatcaggagatgggtgtgagctactggagccaagcggacagtctccc
agcgctgaggacgagatgcgttctgcagcctgtggcttggtgtgtgaatgggcacaaaaa
gttctgagtcgtcagtttgacagcgtggaggatttagcacgcttcttactcaacagccac
tacattggcactaaatccatggctgcactaactgttatgacgggaactcccacaggtgtt
aaaacgcccaccccggcctctgcgttcgtgccaaccggagacgccaactccttccatccc
caaatgaagactctcccttcaccctctgttgacacaaagcagcagctacagagaaagatt
cagaagaaacagcaagaacagaaacttacttctccattgccaggtgatgcccaagccaga
agagcagaagcaggcacaccgggcccagggtctagcatcacttctggaagtccagctttg
ttgtcctcacagcctgcaataggtattgtggtggctgcagtaccaagccccatcacggtt
cagaggaatagacagctgatgacttctccgagtccagtcgcaacaacagagggaaaggtt
ttaccggttaatttccaagtggtaacccagtctgttaagcagtcccctaaaactccgcag
aatattccggcaagtcctgttggtgacaggttagccaggcacagatatgcccagattctt
cccaaaccctctgccacaagcggcataactcttcgttccccgccaacacttctaattacg
aacagccctataaaaacagtgatgcccactccccatgtcagctcggttaatgtcgtcaag
atgaccgctatatctctgacacctaacaatagcggtggtagcaacactccgacaccatta
cgacctgcttcagctggtatcagtagcaccgtttcccaggaagagtctaaccaatttcaa
ccagctcagaacggcagctcggctactttgtatacatctggagctggaagactcggccgt
cccgtcacgaccccgattccatccatttcctcccttagtgaagttaggctaacatctgaa
gctgtgaatgatagtaactcatctgccggtggagaaaagcagagcaccgcacaagggaac
aacgttgggcaaaagaatgagagggccactaaatatagggcttccagtgaaccttctctc
cttgtcaaggcatccccagtgcctgaaagagtgaccagagccaaaagtgactctgcaaca
cctccaagtacaatcataggggcagctgtcccaattagcaataacagcagtgatcatcag
gagagtactttgtatctgactgttatgaatcagaatgctgacattggatccaatgacacc
gcttcaccacctggtcagtcattaaaagatgttagtcttggattgaaaagtcctcgaaag
cgctctgcttctgttttggagtcacatgtgatcccagttaaaagggtgtttatatcccag
cagtctttggatgccagcaacaatcctaaaactagtctagtaatagccacaaagaagata
cagaggccaggaactcctgcaagaccagagagtgctccatgtaaagtcacgctgaagcat
aactctcttccaacacaaatcctggcactttctgatactcccattggaaacacttctcag
actattataagctctcagagctcttcacaggtcgacatcggggacagctctgctggacta
agccctaccgatatagactcttgtaatagcacatcatccgatcaaactttattgcaacaa
attgtgagccagcaacaagttaccattgccatttctcaggaggcatctgctgtgagtgag
ctgaagagctcattacaagactactctcaacagatacaggcagaacaaaagcaggtaact
gctagccacttgccattgatagcccaagctcctgaagcatctgcccagttgacactccag
caagacattgttgactttgatggagctcaagccagcatagactatttccccttcaatgat
gatgacatgacacaagatagcatagtagaagagttagtgcagatggaggagcaaatgaaa
ctgaatagcagtctacagccataccttagtacccttgatttacccttacaagggcagtca
gctcaaagcaccatcctttcctctcaccagactggcactcagttctaccactccgcacat
agtagcaccactccagtacacactcctacgcccacaccgaccccaacaccgaccccgact
ccaacccctacctctgaaatattgccagggggccacagcttagccagggaaagtccttgt
tgtagggtggcacctattaccccagttgatgggattttagttggccggcatacgcctatt
agcacgccgttgtccaactgcagtagtagtgtcccaccaagtcctgttgaatgtcgtaat
ccctttgcatttacccccattaactccaatataccaggttatcatgatggtagtgtagta
tccagtagcccggtcaaacccatgcagagaccgatggccactcacccagacaaggccaaa
cttgactggatcaacaatagatataacagcacatcaggttccccatcagtttccaatagt
aatgccattggaattcttccaagctatcaggacctggtggaggaccactttcgtaaacca
catgcatttgctaaaccagggcaatcttttcaaccacaatccagacaccaagatgtgcat
ttggttcagttaacagccgtgtcacccgtacaaggacaacaggcagtggagaacaagcaa
gaaagttttgctgtgccagcaccattagacaacaaacttacaggttgtacatcgggggct
ggaggtggaacctttaggtgccgcagtgtgagccccgctgttcgtcagcggaacctaagt
ggcacctctgtgcaaaccaactctactccaaggtccgttatttcaccgttcaattctccc
ataactcaagaggttcttaacatcctttctaacagtcattcggtggtcactgccaacagc
atggcccaaaggagccagtcagtaccactaagcataatgatgcagtctgagatgttgcca
attagccaacagggacagcagagtaatagtgccaagataaccagtgtgcttttgagtaaa
atggatggagatggggatgatacagtgcgtgggttgggtgtgaataatatgccctccaag
tacacagcccgaatgaacctgacacagatcttggagactacacaggccttttcagaaggc
actaaccttcatggtcagcagctgtctgtttgctcaagtccttcacagtttgacttccag
aagcctggtttcctcataagcactggagatgaatctgttactttctctagtgatgaccaa
gcacaatcggtctctgggctacaagagcagcagcttcaactacaggaccaacagttggaa
ctacaggatcaacagttgttgcaagatcaacagttgcaacttcaggaacaaccattgcaa
ctccaggaccaacaattggaattacaagaccaacatttacaattacaacaccaacaattg
cagctacaagaccaacagcagctacaacatgatccagacctcagccagcagcagctgctg
tctcaaacgtcacaacaaaacgaacagcagcagcacgagcacctggactttaacagcacc
gtcaaggacctcttgggggaggatggcctcaatcccagctcccaacttgttgggcaggtg
gcatcagaactaagtgcagtagcatctgacttttctagtgaaattcgtttaacctctgac
ctttctggtagcatcaatgacctgaacactttggatcctaaccttttgtttgatccgagt
cagcaacaggaccaatatgaagacgccacactggaggagctgaagaacgacccgttgttt
cagcagatatgcagtgacactgtgaattctgctggatttgactggttggagaacaaagac
caaccaacagtggaaatgttaggttag
DBGET
integrated database retrieval system
