Tachysurus fulvidraco (yellow catfish): 113639207
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Entry
113639207 CDS
T08119
Symbol
cntn1a
Name
(RefSeq) contactin-1a
KO
K06759
contactin 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113639207 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113639207 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tfd00537
]
113639207 (cntn1a)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Contactins
113639207 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tfd00537
]
Others
113639207 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Sp38
Pur_ac_phosph_N
Interfer-bind
DUF4998
Motif
Other DBs
NCBI-GeneID:
113639207
NCBI-ProteinID:
XP_026996742
LinkDB
All DBs
Position
10:1117859..1188616
Genome browser
AA seq
1025 aa
AA seq
DB search
MHHHLPPLLLVLSLALSSSPAYGEAAGIFDESSGHGPVFEEQPVDTIYPEESLEDKIIMS
CRARAMPPATYNWRLNNLDIDFSSESNLHYVLMGGNLIISRPDKSSHVGNYTCLATNKFG
TVVSREASVQFGYLDMFSTEEREAVRVKEGQGVVLLCAPPPHFPDDLTFRWMLNEFPVFI
PLDKRRFVSQTTGNLYIAKVEASDSGNYSCFVSSLSITKSVFSKFIPLVPQSERGSLRKY
TADIKVKFPDTYALVGQNITLECFALGNPIPQIRWRKVDGVLPVHHENSITGGHLHLFNV
QYEDEGVYECEAVNSKGKDWHKANLYVEAAPEWVKHISSSERDIGSDYTMSCAASGKPKP
HVYFMKNGQKYGKHGLHFTHLTSDDSGMYQCIAENRHGVIQANAELRVFVGAPSFQFNPV
KQRLLGAKNGRVVIECKPKAAPRPTFSWSKGTEMLSNSSRIFIWEDGSLEIHNVTKSDEG
RYTCFAENDRGKANSTGSLSVTDATKITLAPSNADVSVGENTRMQCAASHDSSLDLTFVW
SLNGHVIDFDKEAAEYQHTIDGQAGMSSCELLIKNTQLKHAGLYTCMVQTPVDNVTSSAD
LVVRGPPGAPGGVRVEEIGVRSVKLLWSHGTDNHSPISKYIIQYRETTTDEEWKDAVTSP
RNVEGNAERVTVVDLLPWTEYEFRVIATNTLGTGEPSEPSSKTTTLEAAPVVAPSDVGGG
GGTGRELTITWTPVQPQYYYGNNFGYIITFKPNNGTENDRWHRVTVSDPRASRYVYKDPS
IPPATKFDVKVKAFNNMGEGPYSLPAVVYSAQDAPSAAPTIIEARTLSATEAIVFWRPLT
QQTVEGYQVRYWRKSLENEASAQRISSRENQTRLDNMKPNTHYVIEVRAFNGAGYGPASQ
RYEIYTKKAPPSRPPKIIGTRVNSIGTLVNVAWQRVETFPNESAVESYKVLYRQEGLSTG
TLYTTNKESIDLPIHKGDYLVEVRAQSKGGDGAVAQVRISAGGVLAAPSLSLCVLLLVAL
LSLTL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcatctcccgcctctcttgctcgttctgtccctcgcactctcctccagtcct
gcgtatggtgaagctgctggaatatttgacgaatcctcaggccatggacccgtgttcgag
gagcagccggttgacaccatctaccccgaggagtctctagaagacaagataatcatgagt
tgccgagcacgagccatgccacctgctacatacaactggaggctgaacaacttggacatt
gacttctcgagcgagtcaaacctccactacgtcctgatggggggaaatctgatcatcagc
agacctgataagagctctcatgttggcaactacacctgcctggcaacgaacaagttcggc
accgtcgtcagccgagaagcttctgtccagtttggatatttggacatgttttccacggaa
gaaagagaagccgtgcgtgtgaaggaaggtcagggggtggtgctcttatgtgctcctcct
ccacatttcccagacgatcttaccttccgctggatgctgaacgaatttcccgtcttcatc
ccgctggataagagacgcttcgtctcgcagaccacagggaatctgtatatcgctaaagtg
gaggcttctgacagcgggaactactcctgcttcgtctccagcttatccatcaccaagagt
gtcttcagcaagtttatccctttagtcccacagtctgagagaggatctcttcggaagtac
acagccgatataaaagtgaagtttccggacacatacgctctcgtcggccagaacatcacc
ctggagtgtttcgcattaggaaatcccattccccagatcagatggaggaaggtggacgga
gtgctgccagtccatcatgagaacagcattacaggtggacatttgcacctctttaacgtg
cagtacgaggatgagggagtatacgagtgtgaggcggtcaactctaaaggcaaagactgg
cacaaagccaacctctatgtggaagctgctccggaatgggtgaagcacatcagcagcagt
gagagggacatcggcagtgactacaccatgtcctgcgcagccagcgggaaacccaagcct
cacgtatacttcatgaaaaatggccaaaagtacggcaagcacgggttgcacttcacacac
ctgacttctgatgactcagggatgtaccagtgcatcgccgagaaccggcacggtgtgatc
caggccaacgccgaactgcgagtctttgtgggcgctccttcattccagttcaacccggtt
aagcagaggctgctgggggcaaaaaacggtcgtgtggtgatcgagtgcaaacccaaagcg
gcacccagaccgacgttttcctggagcaaaggcacagaaatgctttccaattccagcagg
attttcatttgggaggacgggagtctggagatccacaatgttaccaagtcagatgaaggg
aggtacacatgctttgctgagaacgacagaggcaaagccaacagcaccggatctctctcg
gtcacagatgccactaagatcacgctggctccctctaacgccgatgtgagcgttggtgaa
aacacaaggatgcagtgcgcagcgtcacacgactcgagcctcgacctcaccttcgtctgg
tcgcttaacggccatgtcatcgacttcgacaaggaggcggccgaataccagcacactatt
gatggtcaggcaggtatgtccagctgtgagctgctgattaagaacactcagctgaagcac
gcaggcctctacacctgcatggtccagacacctgtggacaacgtcactagctctgctgac
ctggtagtaagagggcctccgggagctccgggaggagtgcgtgtggaggagattggggta
aggtctgtgaagcttctctggagccatggaacagataatcacagccccatatccaaatac
atcatccaatacagagagaccacaactgacgaggaatggaaagatgccgtaacctctcct
cgcaacgtggaaggaaacgcagaaagggtcacagtagttgatctgcttccttggactgaa
tatgagtttcgagtcattgctacaaacactctggggacaggagaaccgagcgaaccgtca
agcaaaaccaccacactggaagcagcccctgtggtggctccatcagatgtaggaggaggt
ggtggaacgggtagagagctcaccatcacatggacgcctgttcagccacaatactactat
ggaaataatttcggctacattatcacatttaagcctaacaatggcacagagaacgatcgt
tggcacagagtgaccgtttccgaccctcgtgccagtcgctacgtctacaaagacccctct
attcccccagccacaaagtttgatgtaaaagtaaaagccttcaacaatatgggagaggga
ccctacagtctccctgctgtggtttactctgctcaggatgccccctcagcagctcccacc
attatagaggccagaaccttgtcggcgacggaggctatcgtgttttggcgtccgctgacg
cagcagacggttgagggctatcaggtgaggtactggaggaaatccttggagaatgaggca
tcagcacaacgcatctccagcagagagaatcagacacgtctggacaacatgaagccgaac
actcattatgttatagaagtgcgtgctttcaacggtgcaggttatggacccgcgagccag
agatacgagatctatacgaagaaagcacctccaagtcggccaccgaaaataatcggcaca
agggtgaattccattggaactttagtcaatgttgcctggcagcgtgtggagacttttccc
aatgaatctgctgtagagagctataaggtcctgtatagacaggaaggtctaagcaccggg
acactgtacactacgaataaggagtccatagacctgcccattcataaaggtgattacctg
gtggaggtgagagcacagagcaagggaggagatggagctgtggcacaagtacgcatctca
gccggaggagtcttggcagcaccgtccctaagcctgtgtgtccttctgctggtggcgttg
ctcagcctgactctctga
DBGET
integrated database retrieval system
