Tachysurus fulvidraco (yellow catfish): 113639224
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Entry
113639224 CDS
T08119
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113639224 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113639224 (thoc5)
03041 Spliceosome [BR:
tfd03041
]
113639224 (thoc5)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113639224 (thoc5)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113639224 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
113639224
NCBI-ProteinID:
XP_026996766
LinkDB
All DBs
Position
10:complement(2028201..2039362)
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AA seq
684 aa
AA seq
DB search
MSSDPLKKRKTKVIRNDGGTPETKRLRGEGDQDVRTYNEEAELESRDPEQDYTLYKNTCE
TLATLMGEIQELKASGAKEGSVEVETKRKQGCVHFITLKKLNRLSHMRLKKARDQTHESK
QKVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSVDEFFKEAPAEISRPHLTK
DDPHQLTLARLDWDLEQRKRLAEQYKSSLCTKEKILKGIELKKEYLSSLQPGLQAIMQAS
LPVQEYLSMPFEHVQKQTEVARHLPPPLYVLLVQASAYGQACDKNLSVSISGDVDEAKAL
SRPPEDSQDDESDSDAEEEQQNTKRRRGTVGVQLDDKRNKMLKRHPLSLCIDLKCKDGNV
LHLFFYYLMNLNILTVKAKVSASADLSGAISAGELLNPESLLNCLYASDDGQETPNPTNR
YQFDKVGITTFADYVLDLGHPYIWVQKLGGLQFSSDTPQVEGVHSSLSASHMESTIKLLR
GRLLSRLALHKQFSSLEHSIVPVSTECQHLFPAKVVSRLARWTMMRYEDFLELGFVQHVV
KAGLVKETDLFFMAIVERGTARLQAAVVLNPRYPDITPLFSLSLLWKGERSGRTDDNLRA
LESEVNVFRSELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEGPIEFPREKMCL
RSVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgacccactgaagaagcggaagaccaaagtgatccggaatgatggagggacc
cctgaaaccaaacggcttcgaggagaaggagaccaggacgtgcgtacctacaatgaagaa
gcagaactggagagtcgagaccctgaacaagattacaccctgtataaaaacacctgtgag
acattggcaacactgatgggtgaaatccaagagctgaaagccagcggcgctaaagaaggg
agtgtagaggtcgaaacaaagcgcaagcaaggatgcgttcacttcatcactctgaagaag
ctgaatcgtctgtctcacatgagactgaagaaagcacgcgatcagacgcacgagtcgaag
cagaaggtggacgtgttgcacctacagcttcagaatctcctctacgaagtcatgcacctt
cagaaagaaattggcaaatgccttgagttcaagtcccagcatgaagagattgagctggtc
agtgtggatgagttctttaaggaggccccagccgaaatctcccgccctcatctcaccaaa
gacgaccctcaccagctcacgctcgctcggctggactgggatttggagcagaggaaaagg
ttggctgagcagtataagagctcgctgtgcactaaggaaaagatcttgaaaggaattgag
ttgaagaaggagtatctgagcagtcttcagccaggcctacaggccatcatgcaggcgtct
ctgcccgtgcaggagtacttgtccatgccatttgagcatgtgcagaaacagaccgaggtc
gcacggcaccttcctcccccactgtacgtgctgcttgtgcaggccagtgcttacggacaa
gcttgtgacaagaatctgtccgtgtccatcagcggagatgtggatgaagccaaagctctt
tccagaccacccgaagattctcaagatgacgagagtgattctgatgcagaggaggaacaa
cagaacactaaacgacggcgaggtaccgtcggtgttcagctcgatgataagcgtaataaa
atgctgaaacgccatcctctctcattgtgcatcgacctcaagtgtaaagatggcaacgtg
ttgcatctgtttttttattacctgatgaacctcaacattctcaccgtcaaagcgaaagtg
tcggcctccgcagacctctcgggagccatcagcgcaggggagctgctgaacccagaatct
ctgttgaactgcctgtatgcttctgatgacggccaagaaacccccaaccctaccaaccgc
taccagtttgacaaagtgggcatcacgacatttgccgattatgtgttggatctcggacat
ccgtacatctgggtgcagaagcttggaggattacaattttccagtgacacaccacaggtc
gaaggggtgcacagctctctcagcgccagtcatatggagagcaccatcaagctgctgaga
ggacgtctgctgtctcgtctggctttgcacaaacagttcagctctttagagcacagcata
gttcccgtgtccaccgagtgtcagcatctcttcccagctaaagtggtctcacgcctggct
cgctggacgatgatgcgctacgaggatttcctggagttaggattcgtgcagcacgtggtg
aaggccggcctggtgaaggagaccgacctgttcttcatggcaattgtggagaggggaaca
gctcgtcttcaggctgcggtggtgttgaatccgcgttatccggacatcacccctctcttc
tcactctcactgctctggaaaggagagcgcagtggccgcaccgatgataacctgcgggca
ttggagagcgaggtgaatgtgtttagatctgaactacagggaccccgaccaggcctgcag
ctcctgaccaatcagatccagcgtctgtgtgtgtgtctcgacgtttatctggagaccgaa
agccaagtgtgtgacggctcagagggcccaatagaattcccaagggagaagatgtgctta
cgctctgtcaggggacctaatcgtctgaagccttttaagtacaaccacccgcagggcttt
ttcagtcatcgttaa
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integrated database retrieval system
