Tachysurus fulvidraco (yellow catfish): 113639294
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Entry
113639294 CDS
T08119
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113639294 (vldlr)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113639294 (vldlr)
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
113639294
NCBI-ProteinID:
XP_026996878
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Position
20:16046424..16065921
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AA seq
876 aa
AA seq
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MVPCVLGFLFLPLCLRLVEFIDGSRIACEPSQFQCGNGRCIPSVWQCDGDVDCTDESDEN
TCVMKTCAAQDFICRNGQCLPKRWHCDGEPDCEDGSDESVDVCHSRTCRMNEFSCGTGST
LCIPVSWKCDGEQDCDNGEDEASCGNITCSPMEFTCASGRCISQNFVCNGEDDCGDSSDE
LDCAPSSCDTNQFQCKNATCIPISWVCDRDVDCQDQSDESPLHCGKNPTPPAKCSTSETQ
CGSGECIHRKWRCDGDADCKDGSDERNCPPRSCRPDQFKCDDGSCIHGSRQCNGFRDCAD
GTDEDNCKNLTQCSGPDKYKCRSGDCIEISKVCNKVRDCTDWSDEPIKECNLNECLVNNG
GCSHLCRDLVVGYECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHEGY
QMNSSTGVCKAVGKEPSLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFNRQKIFW
ADLGQKAIFSTALDKREDVSSHTKVIDVQMPVGIAVDWIYKNLYWSDLGSKTIAVANFNG
TKQRVLFNKDLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNG
ITLDLIKSRLYWVDSKLHTLCSVDLNGDNRKKVLQSQDYLAHPFALTVFEDRVFWTDGES
EAIYGANKFTGSDVVMLANNLNEPQDIIVYHELVQLSGTNWCNEREENGGCAYMCLPAPQ
INKHSPKYTCICPDGQELASDGLECRPVASTAVPRDEGQVLVHPTRPAETPKPKVAVQSE
PTERNLSTAIHEVKSAKGSAAAWAALPVLLLAMTAVGSYIMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNIDISRHTASVGHTYPAISIVNTEDDMP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcccgtgcgttctggggtttcttttcctgccactgtgtctccggttggtcgagttt
atcgacggctcgagaatagcatgtgagccatcgcagttccaatgcgggaacggccgctgc
atcccatccgtgtggcaatgtgacggtgacgtggactgcactgatgagagtgacgagaac
acatgtgtgatgaagacgtgtgcggcccaggactttatctgtcgcaacggccagtgcctc
cccaagagatggcactgcgacggagaacctgactgcgaagacggctcggacgagagcgtg
gacgtgtgtcacagcagaacttgccgtatgaatgagtttagctgtggcacgggctctaca
ctgtgcattcctgtctcttggaagtgtgacggcgagcaagactgtgacaacggagaagac
gaggcgagctgtggtaacatcacctgctcccctatggaattcacctgtgccagtggtcgc
tgtatctcccagaactttgtgtgtaatggtgaggatgactgcggtgacagtagtgatgag
ttagactgtgctccatcctcctgcgacactaaccagttccagtgcaaaaacgccacctgc
attcctattagttgggtgtgtgaccgcgacgtcgactgtcaggaccaatcggatgagtca
cctctgcactgtgggaagaaccccacaccaccagcgaaatgctcaactagtgagacgcag
tgcggctcaggagagtgcattcaccgcaagtggcgctgcgatggagacgccgactgcaaa
gatggcagcgacgagagaaactgccctccacgctcctgtcgaccggaccaatttaaatgt
gacgacggcagctgtatccatggtagccggcagtgcaacggtttccgggactgtgccgac
ggcacggatgaagacaactgcaaaaacttgactcagtgcagcggccctgacaagtacaag
tgtcggagtggggactgtattgagatcagcaaagtctgtaacaaagtccgtgactgcact
gactggagcgatgaaccaattaaagaatgcaatctgaacgagtgcctcgtcaacaatggt
ggatgctcgcacctgtgccgtgacctggtggttggctacgagtgtgactgcacgcctggg
ttgcagctcattgatcataaaacctgtggtgatatcaacgagtgtctgaatcctgggatc
tgtagtcagatttgcatcaacctgaaaggaggctacaaatgcgagtgtcatgagggttat
cagatgaactctagcacaggagtgtgtaaagcagtaggcaaagagccttctctgatcttc
acaaaccggagagacatccgaaagcttgggctggaaaggcgagagtacacacagatagta
gagcagctgcgcaacactgtggccctcgacgcagacttcaaccgtcagaagatcttctgg
gctgatttgggacagaaagccatcttcagtacagcgctggacaaacgtgaagatgtgagc
agccacaccaaagtgattgatgtccagatgcctgtggggatagcggtggactggatctac
aagaacctctactggtcagacctgggcagtaagacgatagctgtggccaattttaatggc
actaagcagagggtgttgttcaacaaggacttgaaggaaccagcttctattgcagtggat
cctctgtctgggttcctgtactggtcggactggggtgagccagctaagattgagaagtct
ggaatgaacggggtagaccgacaggtcctggttgaaactgatattcagtggcccaacggt
attacccttgatctgatcaaaagcagactttactgggtggattccaagctgcacacattg
tgtagtgtggatctaaatggagataaccggaaaaaagtcctgcagtcccaagactatttg
gctcacccctttgccctcactgtgtttgaggatcgggttttctggacagatggcgagagt
gaggctatttatggtgcaaacaagtttacaggatcagatgtggtgatgctagccaacaac
ctgaatgaaccacaggacattattgtctaccatgaacttgtacagctgtctggtaccaac
tggtgcaacgagagagaagaaaatgggggctgtgcctacatgtgtctccctgcaccccaa
atcaacaaacactcccccaagtatacatgcatttgtcctgacggccaggagctggcctca
gatggcttggagtgcagaccagtggcatctacagctgttccacgagatgaagggcaggtg
cttgtacaccccacacgtcctgcagagaccccaaaacccaaggttgcagtgcaatcagag
cccactgaaagaaatctcagcaccgccatacatgaggtgaaatcagccaagggttcagct
gcagcctgggcagctttgccagtgttattgctggccatgactgcagttggaagttacata
atgtggcggaattggcagataaagaataaaaagagtatgaattttgacaacccagtgtat
ctgaagactacagaagaagacctaaacattgacatcagcagacacactgcgtcagttggt
cacacgtatccagctatttctatagtcaacacagaagatgacatgccataa
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