Tachysurus fulvidraco (yellow catfish): 113639346
Help
Entry
113639346 CDS
T08119
Symbol
rab11fip1b
Name
(RefSeq) putative autophagy-related protein 11 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113639346 (rab11fip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113639346 (rab11fip1b)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113639346 (rab11fip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
113639346
NCBI-ProteinID:
XP_026996972
LinkDB
All DBs
Position
20:complement(16211941..16230974)
Genome browser
AA seq
1244 aa
AA seq
DB search
MSLADQSLQFFPVSARVSVLRARGLRIKGKDGTNDAYTALQAGRETFRTPVAEKLAEPVW
GGNDAAFIFTLPADSARTEDGVPLQVRVFHRVPLGADKLLGLTVVNVHELRQNSARENPQ
WFKLLNKAGKADKARGEVLLDIQFLKSSMSVSMIDLSDKSHSRLGKFKDKLRGKKKDGLS
DSASAILPSVSQILTDSEGEMDGETEGESTKKKKNKLKSLFVPKSNMKRNSLSQSMSSLK
ALPDKNSSISSSTSSGLNVDSSEGKKKKKFTFLTHKRNGSTDSKASNHSDLTFGSANQNP
PPQTDICVNGSHVYREQNQPEEVQEMEEDEEGENEEEEESWSREEEEQKRLEEEKRREIE
EERMRKEKEQHRKEEEEKERVRHEREKEEQRRRKEEEENERMRMERVKEEERRRMEDQEK
ERIRIEKEREEHRRKMAEEKERIRMEREKEEEERRRMEEKEKEMIRMEREKEEQRRKMAE
EKERIRIEREKEEQRRRMEEEEKERIRMEREKEEQRRRMEEEEKERIRMEREKEEQRRRM
EEEDKERIRMEREKEEQRRRMDKEEKERIRMEREKEEQRRRMEEEEKERIRMEKETKEQR
RRIEEEEKERIRMEREKEEQQRRINAEERERPWIEKGEEKRKLEEEESMRMKREKEEQMR
RLEEEQKKKAVEAEVLRRKMAEEKDRKRAEEDEKMRIAEEERKKEEKKRAERERMMEEEK
KLREEKRIETERRLANEKKAREEEERKVAEEKEKQRKEEQVREEKERKRRKEEEQELRNK
EMEERKKKERLGMEETLFEESVISQSTDFTRSARISAKPSVSVSQASMVNSNPFWDDDLD
AGVFISVEERTAKKGHALLPPQLTGPNVAFGGAPKQLSHSKEVSKRQAPQPPGLPKMTSF
DLGRKERQHESNILSVSQDDNQVLTNPFTCDEPVPVKHKRPAPKPGSGISVSKDVGNILT
ERTSHLEIIGSASSIKDNPPNDITVEDVRSDLTYELSKREERLEHIVEPDTAKPNAPSFA
NWDLFPEPVVCRTEELPIMERSQRKSRAPLPPSKPKRTGDHSTQQQQQALTYKTNFEQAQ
ENASVSSMETPANNAPTLSTVSSSTFTSLHDKSGLVETGSGSRWGKVVPNDAGEVREEVA
PTSVIRQHAVKPLSTAQKQPETHESRVTDKTQPNTKAVEEVMKGPYSQLTQAELISLVLR
QQEQISQRDTRIKELEQYIDNLVVRVMEEKPSILMNLNTKNKSM
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcggatcagagcctgcagttttttccggtgagcgcgcgggtgtcggtgctc
cgagcgcggggcctccggatcaaggggaaagatggcactaatgatgcgtatacggcactg
caggcgggccgagagacgttccgcacaccggtggcggagaagctcgcggagccggtgtgg
ggcgggaacgacgccgctttcatcttcacgctaccggcggacagcgcgcgcaccgaggac
ggcgtgcccctgcaggtgcgcgtgtttcaccgcgtcccgctcggagcggacaagttgctc
ggactgaccgtcgttaacgtgcacgagctccggcagaacagcgcgcgcgagaacccgcag
tggtttaagctgttaaataaggccgggaaagccgacaaggcgcgtggtgaggttctgctg
gacattcagttcctgaagagcagcatgagcgtcagcatgattgacctctctgacaaatca
cactcgcgcctcggaaagtttaaggacaaactgcggggcaaaaagaaagacgggctgagc
gactcggcctccgccattttgccttcggtcagtcagattctgactgacagtgagggagag
atggacggagagacggagggagagtcgacaaaaaagaagaagaacaaactaaagtctctc
tttgttcctaaatccaacatgaagcgtaactctctgtctcaatccatgtcctctttaaag
gcgcttcctgataaaaactcctccatcagctctagcacgtcctcaggcctcaacgtggac
tcttcagaaggaaagaaaaagaagaaatttacttttttaacacacaagcggaatggaagc
acagacagcaaggcatccaatcatagtgacttaacctttggctcggccaatcagaatcct
ccgccacagactgatatatgcgtaaatgggagtcatgtatacagagaacaaaaccagcct
gaagaagtgcaggaaatggaggaggatgaggagggggagaatgaggaagaagaggagagc
tggtcaagagaggaagaagaacagaaacgattggaggaagaaaagaggagggaaattgaa
gaggagagaatgaggaaagagaaagagcagcacagaaaggaagaggaggaaaaagaaagg
gtaaggcacgagagagagaaagaggagcaaagaagaagaaaggaggaggaagaaaatgag
aggatgaggatggagagagtgaaggaagaggaaaggaggaggatggaagaccaagaaaaa
gaaaggataaggatagagaaagagagggaagaacataggagaaagatggcagaggagaaa
gaaaggattaggatggaaagagagaaggaggaagaagaaaggagaaggatggaggagaaa
gaaaaagagatgataaggatggagagagagaaggaagaacaaaggaggaagatggcagag
gagaaagaaaggataaggatagaaagagagaaggaagaacaaaggagaaggatggaggag
gaagaaaaagagaggattaggatggagagagagaaggaagaacaaaggagaaggatggag
gaggaagaaaaagagaggattaggatggagagagagaaggaagaacaaaggagaagaatg
gaggaggaagataaagagaggattaggatggagagagagaaggaagaacaaaggagaagg
atggataaggaagaaaaagagaggattaggatggagagagagaaggaagaacaaagaaga
aggatggaggaggaagaaaaagagaggattaggatggagaaggaaaccaaagaacaaagg
agaaggattgaggaggaagaaaaagaaagaattaggatggagagagagaaggaagaacaa
cagagaagaataaatgcagaagaaagagagaggccgtggatagagaaaggggaggaaaag
agaaagttggaagaggaagaaagtatgaggatgaagagagaaaaggaagaacagatgaga
aggttggaggaggaacaaaaaaagaaagcggtggaggcagaagtgttgaggagaaagatg
gcagaggagaaagacaggaaaagggctgaggaagacgaaaagatgaggattgctgaagag
gaaaggaagaaggaagagaagaaaagagcagaaagagaacgaatgatggaggaggagaaa
aaactgagagaggagaaaaggattgaaacggagaggcggttagcaaatgagaaaaaagcc
agggaggaagaagagagaaaagtagcagaagagaaggagaaacaacggaaagaagaacaa
gtccgagaagaaaaagagaggaaaaggagaaaagaagaggagcaggaactaaggaataag
gagatggaggaaaggaaaaagaaggagagattgggaatggaagaaactttatttgaagag
agcgtcatctcccagtccactgacttcacacgttcagccagaatctctgctaaaccaagt
gtgtctgtgtctcaagcgtctatggtaaactccaaccccttttgggacgacgatttagat
gctggcgtttttatcagtgttgaagagagaactgctaaaaaaggacatgccctattacct
ccacaattgacaggaccgaatgttgccttcggaggtgctcctaaacagctttcccattca
aaagaagtctcaaaacgtcaagcacctcaaccaccaggtttgccaaagatgaccagcttt
gatctaggaaggaaagagagacagcatgagagcaacatcttgtcagtctctcaagatgac
aatcaagttcttactaatccattcacatgtgatgaaccagtgcctgtaaaacacaagaga
ccagcaccaaaaccaggaagtgggatatctgtgtctaaagatgttggcaatatcctaaca
gaaagaacttctcaccttgagataataggaagtgcttcgagtatcaaagataatccacca
aatgatattacagtcgaagatgtcagaagtgaccttacttatgaactgtcaaaaagagaa
gaacgtctggagcacatagttgagcccgacactgcaaaaccaaacgctccatcatttgcc
aattgggatttgtttccagaacctgtggtttgcagaactgaagaactgccaatcatggaa
agatctcaaagaaagtctagagctcctcttcctccaagtaaacccaaaagaactggagat
cacagcacacaacaacagcaacaagctcttacatataagactaactttgagcaagcccaa
gagaacgcatctgtttctagtatggagacacctgcaaacaacgctcctacattatccact
gtttcatcctctacgttcacttcacttcatgataaatccgggttggtggagacgggttct
ggttctaggtggggtaaagtggtacccaatgatgcaggtgaagtaagggaagaagttgct
cccacctcagtaatcaggcagcatgctgtgaaacccctgagcactgcacagaaacagcct
gaaactcacgaatctagagtaactgacaaaacacagcccaatacaaaggctgtagaagag
gtgatgaaaggtccgtattctcagttgacacaggctgagctgatctctctggtattgcgg
caacaggaacagatttcacagcgtgatactaggatcaaggaactggagcaatacattgat
aacctggtggtgcgtgtgatggaggaaaaaccaagcattctgatgaacctgaacacaaag
aacaaatctatgtga
DBGET
integrated database retrieval system
