Tachysurus fulvidraco (yellow catfish): 113639354
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Entry
113639354 CDS
T08119
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113639354 (ddx4)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113639354 (ddx4)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113639354 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
113639354
NCBI-ProteinID:
XP_026996984
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All DBs
Position
20:13970175..13982045
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AA seq
625 aa
AA seq
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MENWEDDDQSPVVTNMTLVEESHGKGGGGGFGTPGGNRGRGFRGQGGGFKSFSSGHDENR
NEEVDGSSSWNGGGFSGSGSRGFKSDFGSRGGRGARGGRGAFRKDDDDEGRRRFGGGGGY
RGRDEEVFSKGSQENGDGKDDGRTAGPKVNYIPPPPPEEENSVFAHYATGINFDKYDDIL
VDVSGTNPPRAIMTFEEAQLCETLNRNVAKSGYEKPTPVQKHGIPIISAGRDLMACAQTG
SGKTAAFLLPILQHLMSDGAAASKFSEVQEPEVIIVAPTRELINQIYLEARKFAYGTCVR
PVVVYGGTSTGYAIREVLKGCNVLCGTPGRLLDIIGRGKVGLSKVRFLVLDEADRMLDMG
FEPDMRKLVNSPGMPPKEERQTLMFSATYPEDIQRLAANFLKVDYLFLAVGVVGGACSDI
EQVIIQVTQYSKREKLLELLKTTGTERTMVFVETKRSADFIATFLCQEKVSTTSIHGDRE
QREREKALSDFRTGQCPVLVATSVAARGLDIEHVQHVVNFDLPKEIDEYVHRIGRTGRCG
NTGRAVSFFDPEPDTPLARSLVKVLSGAQQEVPSWLEEIAFSAHGTTGFNPRGKLFASTD
TRRGESFLKNQTPQPAAEADDDDWE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagaactgggaagacgacgaccagagccctgttgtgaccaacatgacactggttgag
gaaagccatgggaaaggtggtggaggtggttttgggactccagggggcaacaggggtcgg
ggctttagaggacagggtggaggcttcaagagcttcagttcagggcatgatgaaaataga
aatgaagaagttgatggtagcagctcctggaacggtggtggattcagcggaagcggcagc
agaggtttcaaaagtgactttggtagcagaggtgggcgtggagcaagaggaggccgtgga
gctttccgaaaagatgatgacgatgaaggtagaagacgcttcggcggaggtggaggatac
agaggacgggatgaggaggtgttttcaaagggatcacaggagaatggcgatggaaaggat
gatggtaggactgcaggacccaaggtcaactatataccccctccacctccagaagaagag
aactcagtttttgcccactatgcgacaggcattaactttgacaagtatgatgatatcctt
gtagatgtaagtggaaccaatccacccagagcaatcatgacatttgaagaagcacaactc
tgtgagactcttaacagaaatgttgccaaatcaggatacgaaaagcctacacctgttcag
aagcacggtattccaatcatttctgccggaagggatcttatggcttgtgctcagactgga
tctggaaaaacggctgcgtttttgctgcctattctgcagcatctcatgagtgacggtgca
gcagccagcaagttcagtgaggtgcaggagcctgaagtaatcattgtggctcccaccagg
gaactcattaatcagatttacctcgaggcccgcaagtttgcctatggcacttgtgtgcgt
cctgtcgtggtttatggtggcacaagcactggatatgcaatccgagaagtgttgaagggc
tgtaacgtgttgtgcggcacacctggaagattgctcgacattatcggacgtggaaaggtt
ggactaagtaaagttcgttttttggtgctggatgaagctgaccgaatgttggacatgggc
tttgagccagacatgcgaaagctggtgaactctccaggaatgcctcctaaagaagaacgg
caaaccctcatgttcagtgccacatatccagaggatattcaaaggttggcagctaatttc
ctaaaggtggattatctcttcctggctgtgggggtggtgggaggagcctgcagtgacata
gagcaggtcatcattcaagtcactcagtactcaaagagggagaagctgctggagctgctg
aagaccacagggacggagaggacaatggtctttgttgaaaccaaaagaagtgcagatttc
attgcaacatttctctgtcaggagaaagtgtccactactagcatccatggtgatcgggaa
cagcgagagcgagagaaagctctcagtgactttcgcacaggtcagtgtcctgtgctggtt
gctacttctgttgctgctagaggtctggacattgagcatgtccagcatgtggtgaacttt
gacctaccaaaagaaatagacgagtatgtgcaccgcattgggagaacaggacgatgtgga
aacacaggaagagctgtgtccttctttgacccagagcctgatactcctctagctcgctct
ctggtcaaagtcctctcaggggcccaacaggaagtaccttcatggctggaggaaattgca
ttcagtgcccatggcaccacagggtttaacccacgtggtaaattgtttgcctccactgac
actcgcaggggtgaatcattccttaagaaccagacgccacagccagctgcagaagccgat
gatgacgactgggagtag
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