Tachysurus fulvidraco (yellow catfish): 113639375
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Entry
113639375 CDS
T08119
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113639375 (chd1)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113639375 (chd1)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113639375 (chd1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113639375 (chd1)
SLIK complex
113639375 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
DEAD
Motif
Other DBs
NCBI-GeneID:
113639375
NCBI-ProteinID:
XP_026997028
LinkDB
All DBs
Position
20:complement(14251272..14269555)
Genome browser
AA seq
1839 aa
AA seq
DB search
MDGRSEDESVSNSTGDSSNSDDESGSGSGSGSGSSSSSSSSSSSQSGSSGSGSGSDSGSQ
SDSDSEKSKGKNGQNNSGKIDSAEFWKSNPSILAVQRSAMLRKQQQQQQQSSSNSDSDEE
SSSSDDSDDDSSRKRKSKGTDSDSDSGSGSGSGSGSDSSNSSAEEEAENSEESVSDYEPS
HKVKSRKPPNKTNARNGKKSKVFKKKPSASSSDDDDDYKKALAGPRRQATVNVSYKEDDE
LKTDSDDLVEVCGEDVPPPEEDEFETLERVMGIRIGRKGATGATTTVYAVEADGDPNANF
NPNKQPGDVQYLIKWKGWSHIHNTWETEDTLKQQNVKGMKKLDNFKKKEQERKKWFKAAS
PEDIEYLNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGA
LISRKFQKCIDAYMSRNQSKSIPFRDCKVLKQRPRFVPMKKQPHYIGGEGLELRDYQLDG
LNWMAHSWCKSNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQRE
IHLWAPQMNVVVYLGDISSRNMIRTHEWMHVQNKRLKLNILLTTYEILLKDKSFLGNVSW
AFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSW
ERFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKW
ILTRNYKALSKGTKGSTSGFLNVMMELKKCCNHCYLIKPPEDNDFHNKAEALQHLIRSSG
KLILLDKLLLRLKERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGEMRKQALD
HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVN
IYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSSTPFNKEELSA
ILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMM
EEEDMDMDGDGKQKNWDSIIPEEQRRRLEEEERQKELAEIYMLPRMRNCAKQISFNGNEG
RRSRNRRYSGSDSDSASDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLER
LDAIARDAELVDKSEHDLRRLAETVHNGCIKTLRENPCGPEKTSGGRRGKVKGPTFRISG
VQVNAKLVISHEEELAPLHKAIPADPEERKRYMLPCHAKAAHFDVDWGKENDSSLLIGIY
EYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQRQM
GMANSRKRKPRGKKNKTVKPKVEEVVNSLSSAPPSEKSSEDEDDKEDEKESPPIKPPPNR
RGRASDRVVKEEEEEEEEEDDDEEDEEEEEEEEEEDERETEPHVKELEEKELKEREIKKE
KKEDSRDSKEKKEPKEKKESKPVEHKVEESFTEKAPEIKAEVREKSKKADTPIHITAGGE
TVPITEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHI
TDCLKEYTNLEHIKQWRRNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQMVDQNTSTV
NTQAFRHTDIERLKDSQQDESSRDSYSSDRHHSSSRSHDQSKERHSSDSYRKSSDSRKRP
YSSFSNGKDHRERDHYRDRQDSRYYSDNKHRKLDDHRSSRDNWSDSNNKERVHSEHRSSA
EHRSSAEHRSSAEHRSSSEHRSSSEHRSSSDYSHHKSSRDYRYHSEWQMEQRASGSGPRS
PRDQRSPYDSRSPMGHRSPFEYSSEHKSTPEQVWSSRRT
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgcagtgaagatgaaagtgtgagcaacagcactggagattccagtaactcg
gacgatgagtctgggtctggatctggctcagggtctggttccagctccagcagcagcagc
tccagtagcagtcagtcagggagcagtggctcaggaagtggctcagactcaggcagccaa
tccgattctgactctgaaaagtcaaaggggaaaaatggtcaaaataactctggcaagatt
gattcagcagaattttggaagtctaatcccagtattctagcagtgcagaggtcagctatg
ctcaggaaacagcagcagcaacagcaacagagctcctcaaacagtgactcagatgaggaa
tcctccagtagtgatgactcagatgatgattcttcaagaaagcgaaagagtaaagggact
gattctgactccgattctgggtctggctcaggatctggttcagggagtgactcgtccaat
tcttcagctgaggaagaagcagagaacagtgaagagtctgtttcagactatgagcctagc
cacaaagttaaaagcaggaagccacctaacaagacaaatgccagaaatggaaaaaagagc
aaggtttttaaaaaaaagccctctgcctcttcgtcagacgacgacgacgactataaaaaa
gctctggctggtcctcggaggcaggctacagtgaatgtcagctataaagaggatgacgaa
ctgaaaacagactctgatgacttggtggaggtgtgtggtgaggatgtcccaccacctgag
gaggatgagtttgagaccctggaaagagtgatgggcataagaataggacgaaaaggagcc
actggggccaccaccactgtctatgcggttgaggctgacggagaccctaatgccaacttc
aacccgaacaagcagcccggagatgtgcagtacctgatcaaatggaaaggctggtcacac
attcacaacacctgggagacagaggacactttgaagcagcagaatgtaaagggcatgaag
aaactggacaactttaaaaagaaggagcaggaaaggaagaaatggttcaaagcagcatca
cctgaggatatagaatacttaaactgccagcaggaacttatggatgacctgcattcacag
tatcagcttgtggagagaattattggccattcgaatcagaagtcagcagcaggctaccca
gactacttatgcaaatggcaagggcttccatattcagaatgcagctgggaagatggggca
cttatttctagaaagtttcagaagtgcatagatgcctacatgagccggaaccagtccaaa
tcaatcccattcagggactgcaaggttttaaagcagaggccgcggtttgtgcctatgaag
aaacagcctcattatattggcggggaaggacttgagcttcgagactaccagctggacggc
ttgaactggatggcgcattcgtggtgcaagagtaacagttgtattctagcagatgagatg
ggacttggaaagactattcagaccatttcctttctgaactatctgttccatgagcaccag
ctctatggaccgttcctactggtggtaccattgtctacactcacctcctggcagagggaa
atccatctctgggccccacagatgaatgtggttgtctacctgggtgacatcagcagtagg
aacatgatcagaacacatgagtggatgcatgtccagaacaagcggctaaagttaaacatc
cttctcactacatatgaaattctcctgaaagataagtcatttctggggaacgtgagttgg
gcattcattggtgtggacgaggcccacaggttaaaaaatgatgattcccttttgtataag
accatgattgagtttaagtccaaccaccggctccttatcacaggaacacctctgcagaat
tccctcaaagagctatggtcactccttcatttcatcatgcctgagaagtttcactcatgg
gagcggtttgaagaagagcatggcaaaggcagagactctggctatactagcttacataag
gagctggagcctttcctgctacggagggtaaaaaaggatgtggagaagtcactacctgcc
aaggtggaacagatcctcagagtggagatgagtgccatccagaaacaatactacaagtgg
atcttgactagaaactacaaggcactcagcaaaggcacgaaaggaagcacgtctggtttc
ctcaacgttatgatggagctgaagaagtgctgtaaccactgctacctcatcaaaccgcca
gaggacaatgatttccacaacaaagccgaggccttgcagcacctaatccgtagtagcggg
aagctgatacttttggacaagcttctgttacggctgaaggagcgtggccaccgtgtgctt
atcttctcccagatggttcggatgctggacatccttgcagaatacctgaagagccgtcag
ttcttattccagaggttggatggctccatcaaaggcgagatgagaaagcaggcattggat
catttcaatgcagaaggatctgaggatttctgtttcttgttgtccacacgagcaggtggc
ctgggcattaacttggcttctgcagatactgtggtcatttttgattcagactggaacccc
cagaatgacctgcaggctcaggctagagctcacaggatcgggcagaagagacaggtgaac
atttatcgtttggtgactaaggggtctgtggaagaagacatcattgagcgagccaagaag
aagatggtgctggaccaccttgtaattcagaggatggacactacagggaaaacagtcctt
catactggtgctgctccttccagcagttctacccctttcaataaagaggagttgtccgct
attttaaagtttggtgctgaagaactttttaaggagccagaaggagaagaacaagagcca
caggagatggatattgatgaaattctgaagagagcagagaccagggaaaatgatcctggg
ccatctactgtaggagaagagctgctttcgcagttcaaggtggcgaatttttccatgatg
gaggaagaagatatggatatggatggagatggcaaacaaaagaactgggattcaatcatt
cctgaagagcagcgcaggagactggaggaagaggagaggcagaaggagctagcagagatc
tacatgctgcctcgcatgagaaactgtgccaaacagataagctttaacggtaacgagggc
aggcgaagtcggaaccgaagatattctggctcggatagtgactccgcatcagaccgaaag
aggcccaagaagcgaggcaggccacgaactattcctcgggaaaatatcaaaggcttcact
gatgctgaaatacgaaggtttatcaagagttacaagaaatttggtggtcctttagaaaga
ctggacgctattgccagggacgctgagctggtggataaatcagagcatgacctgaggagg
ctagcagagactgtacacaatggctgtattaaaaccctgagggaaaacccatgtggccca
gaaaaaacctcaggaggcaggcgagggaaggtgaagggacctacctttaggatctcaggt
gttcaagtcaatgctaagcttgtaatctcacatgaggaggaactggcccctttgcacaaa
gccattcctgctgacccagaggaaagaaagaggtatatgcttccttgccatgcaaaggca
gctcattttgatgttgattggggaaaagaaaatgactccagccttcttattgggatttat
gagtatggctatgggagctgggaaatgattaagatggacccagaccttaacctcacccac
aagcttttaccagatgaccctgataagaaaccacaggccaaacagctccagacgcgagcc
gactacctcatcaaattgctcagcaaggacctggccaaaaaggaggcccagaggcaaatg
ggcatggctaattcccgaaagaggaagccacgaggaaaaaagaacaaaactgtgaaaccg
aaggtggaagaagttgtcaacagtctgtcctctgctcctccctcagagaagagttcagaa
gatgaggatgacaaggaagatgaaaaggaatctccacccatcaagccaccaccaaacaga
aggggtcgagcttctgatcgtgtggtaaaggaggaggaagaggaggaggaggaggaggat
gatgatgaagaagatgaggaggaggaagaggaggaggaagaggaggatgagcgagagaca
gaaccccatgtcaaagagctagaggaaaaggagctaaaagagagagagattaaaaaagag
aagaaggaggacagtcgggacagcaaagagaaaaaggagcccaaagagaaaaaggaaagc
aagcctgtagaacacaaagtggaggaatcctttacagagaaggctccagagataaaagct
gaagttcgggaaaagagcaaaaaggcagacacacccatccatataactgctggaggggag
actgttccaattactgaggagtctgaggagcttgaccagaagaccttcagcgtgtgtaag
gagcgaatgcgcccagtgaaggcagctttgaagcagttagatcgtcctgagaaaggtctt
tctgaacgcgagcagctagagcatactcggcagtgcctgataaaaattggagaccacatc
acagactgcctaaaagagtacaccaacctcgaacacatcaaacagtggagaagaaatctt
tggatatttgtttccaaatttacggagtttgatgctagaaaactgcataagctgtataag
catgcgatcaagaaaagacaagaaaatgcccagatggtggaccaaaacactagcactgta
aatacacaagcctttagacacacagacattgagaggttaaaggattctcagcaagacgag
agcagtagagacagctacagttcagacaggcaccactcaagctcacgtagccatgaccag
agtaaagagcgccactccagcgattcatacaggaaaagctcagactccaggaaaagacca
tactcctccttcagcaatggcaaagaccaccgagagcgagaccactacagagaccgccag
gacagcagatactacagtgacaacaagcataggaagctagatgatcaccgttctagtcga
gacaactggtcagacagcaacaataaggagcgtgtacactcagagcaccggtccagcgcg
gagcaccggtccagcgcggagcaccgatccagcgcggagcaccggtccagctctgagcac
agatccagctctgagcatcggtccagctctgactacagccaccacaagtcctctcgtgac
taccgatatcactcagaatggcaaatggagcagcgggcatcgggtagtgggccacgttca
cctagagaccagaggtcaccctatgactcccggtcacccatgggccaccggtcgcctttt
gagtactcttctgagcacaagagcacacccgagcaggtctggagcagtcgtaggacgtag
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integrated database retrieval system
