Tachysurus fulvidraco (yellow catfish): 113639784
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Entry
113639784 CDS
T08119
Symbol
si:dkey-33c12.3
Name
(RefSeq) vimentin
KO
K04572
neurofilament light polypeptide
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113639784 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113639784 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113639784 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
113639784 (si:dkey-33c12.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Phage_GP20
ODAD1_CC
TSC22
HAD
Motif
Other DBs
NCBI-GeneID:
113639784
NCBI-ProteinID:
XP_026997705
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All DBs
Position
4:complement(12638338..12641378)
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AA seq
380 aa
AA seq
DB search
MSLLSSSSLIRRWDNHSSPYRLSQMSFTPSRRLLKSEPLRYWEPNELSVVCTELLGVRAQ
EKEELVGLNDRFASYIEKVRCLEQQNRMLMGQLEALQVMQTQPSRLQQLFRQEAQDLRQQ
LHHETQDKEHMEVRKDKLRVEQEQLEKRWQEEVRQREWAEDELQRARDEADRTAMLTCDA
EVRLISLAQELAFLKQVFAEEREGLKVQLQVSSLTTEPDVSRPDLSAALREIRTQYENLA
KRNMQTAETWYQGKAANVAQVADKQQEAVRLVRGETAKHRQLLLACSNEVETLKSVINSL
NSQLRELEETQSEEVAKYQGRISHLERDIADAKEEMSRYLKEYHDLLNVKMALDIEIAAY
KQLLEGEEIRLTYYSLPILA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagtttactttcctcctcctcactgatccggcgctgggacaaccattccagcccctac
cgcctctcccagatgtccttcactccctcacggcggctgttgaagtcagagcctttgcga
tactgggagccaaatgagctgagtgtggtatgtacagagctgctgggagtgagagctcag
gaaaaagaagaattagtggggctgaatgaccgttttgcctcctacattgagaaggtgcgt
tgtttggagcagcagaatcgaatgttaatggggcagttggaagccctgcaggtaatgcag
actcagccatctcggctgcagcaactattcagacaagaggcacaggatcttcgccagcag
ctgcaccatgagacccaggacaaggaacacatggaggtgcgcaaagacaagctgcgagtg
gagcaggagcagctggaaaagagatggcaggaggaggtgcggcagcgtgagtgggctgag
gatgagctgcagcgtgcaagagatgaggcagacaggacagcaatgttaacctgtgacgct
gaggtgagactgatttctttggcgcaggagttagcctttctgaagcaggtgtttgcagaa
gagcgggaggggctgaaggtgcagttgcaggtgtccagtctcaccacagagccagatgtg
agcagaccagacctctcagccgccctgagagagatccgtacacagtatgaaaacttggcc
aagcgcaacatgcaaaccgccgaaacctggtaccagggaaaggcggccaacgtggcacaa
gtagccgataagcagcaggaggctgtgcgcttggtgcgtggggaaacggccaagcaccgt
cagctgctgctggcttgctccaatgaggttgaaactctgaagagtgttatcaactctctg
aattctcagctcagagaactagaggagacacagagtgaggaggttgccaagtatcagggg
aggataagtcatctggagagggatattgctgacgctaaagaggagatgtcacgctacttg
aaggaatatcatgatctgttgaacgtaaagatggccctggacattgaaattgcagcatac
aagcagctgcttgagggggaggagattcggctgacgtactactctctgcctattctggca
taa
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