Tachysurus fulvidraco (yellow catfish): 113639837
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Entry
113639837 CDS
T08119
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X3
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113639837 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113639837 (kcnma1a)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113639837 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
113639837
NCBI-ProteinID:
XP_026997782
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Position
4:complement(13461096..13591592)
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AA seq
1302 aa
AA seq
DB search
MLAGADRNLSRGGDGISRMTNNNNYNKNSDSSVSISRMDVIIPFSADVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNVKNKEAQKVNNGQADGPLKSQDEKDEA
PASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFYK
DFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGL
RFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENF
QNSQPLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELI
GNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLE
LEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVIS
IKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLSTM
LANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLI
AIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAYFYCKACHDDITDP
KRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSERDCSCMAGSVHSNMDSLQRAFPLSSV
SVHDCSTSLRASKYKYNGYITSPADGATTPGKTGGQREAGVRFKAEWILVDDEHPSTLSP
KKKQRNGGMRNSPNCSPKVMRHDPLLIPGNEQIENMDANVKRYDSTGMFHWCPSKEIEKV
ILTRSEASMTVLSGHVVVCIFGDVSSALVGLRNLVMPLRASNFHYHELKHIVFVGSLEYL
RREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILA
SLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLVRQASVTTGSNIPIITELV
NDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAISVLDSLMSATYFNDNILTLIRTLVTG
GATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKA
LKTYNMLCFGIYRLRDAHLSAPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSR
TSLSHSSHSSHSSSKKSSSVHSIPTTNRPNRSSKTRESREKHNATRMNRMSQEKKWFTDE
PENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgctagctggggcagatcgcaacctttcccgcggcggcgacggcatctctagaatgact
aataataacaactacaataaaaactcggactcttctgtctctatatccaggatggatgtg
atcatcccgttctccgcagacgtgccgtgcgataacaatggccagcgcatgtggtgggct
ttcctcgcctcgtccatggtgacgttcttcgggggtctctttatcatcctcctgtggagg
accctcaagtacctgtggactgtctgctgccattgtaacgtcaaaaacaaggaggcccag
aaagtgaataacgggcaggcagatgggccactgaagagccaggatgagaaggatgaggct
ccagctagtgaggtgggctggatgacctcggtgaaagactgggccggggtcatgatctca
gcacagactctcacaggcagagtactggtcgtgttagtctttgctctcagtattggagcc
cttggaatatacttcatagactcgtctgaccctatagagtcctgtcagaacttctataaa
gacttcacgttacagatcgacatggccttcaatgtgttcttcttactctactttggtctg
cgatttattgcagcaaacgacaagctttggttctggctggaggtgaactccgtggtggat
ttctttactgtgccacctgtgtttgtgtcggtgtatcttaacagaagctggctgggtctg
agatttctaagagccttgagactgatacagttctcagaaattttacagtttttgaatatc
ttaaagacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcacatgg
ctcacagctgcaggattcattcatctggtggaaaactcaggggatccttgggaaaacttc
caaaattctcaaccactttcatattgggaatgtgtgtacttactcatggtcactatgtcc
acggtgggatacggggacgtctgtgcgaaaaccacccttggccgacttttcatggtcttc
ttcattcttggcggtttggccatgtttgccagctacgtccctgaaatcatagagttaata
ggaaaccgcaagaaatatggtggttcctatagtgcggttaatggcagaaagcatattgtg
gtctgtggtcatatcacacttgaaagtgtatccaacttccttaaagacttcctacacaag
gacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaatcttgag
ctggaagccttgttcaaacgtcacttcactcaggtggaattctaccaaggatctgttctt
aacccacatgatctagctagagtcaagatcgagtcagcggacgcatgcttaattctcgcc
aacaaatactgtgcagacccggatgctgaagatgcatcaaacattatgagagttatatcc
atcaagaattaccatccaaagataagaataataactcaaatgttacagtaccacaacaag
gcccatctgctaaacattcccagctggaactggaaggagggcgatgatgcgatctgcctg
gccgagctgaaggcaggctttatagcccagagctgcctggcacaaggcctgtccaccatg
cttgccaacctcttctccatgaggtcatacatcaagattgaagaggacacatggcagaag
tattatttggagggagtggctaatgagatgtacactgagtacttgtccagtgcctttgtg
ggcctttcttttcctacagtttgtgagctatgttatgtgaagctcaaattgttgttgatt
gctattgagtacaagtccgagcagagggaaagcagaagcagaaagcgtatcctgatcaat
cctgggaaccatgtaaagatgcaggagggaaccttgggattctttattgccagtgatgcc
aaagaggtcaaaagagcatatttttactgcaaagcttgtcatgatgacatcacagatccc
aaaaggatcaaaaagtgtggctgcaagagactgatatattccaagatgtccgtctacaag
cgaatgaaactggcatgttgttttgattgcgggcgctctgagcgcgactgctcgtgcatg
gcaggcagtgtacatagtaacatggacagccttcagagggccttcccactttcttctgtc
tctgttcatgattgctcaaccagtttacgtgcctccaaatataagtataacggatatatt
acgtcaccagcagatggcgctacaactccagggaaaacaggaggtcagagagaggctggg
gttcggttcaaagcagaatggattttagttgacgacgagcatccatcaacgctgtcaccc
aaaaagaagcagcgcaatggaggcatgcgaaattcacccaactgctcacccaaagtgatg
agacacgaccctttacttattccaggaaacgagcagattgagaatatggacgctaatgtg
aagagatacgactccactggaatgtttcactggtgcccttccaaagaaattgagaaagtc
attctgacaaggagtgaggcttccatgacggttctaagtggacatgtcgtggtctgtata
ttcggtgatgtcagttctgctttggtggggctgcgaaacttggttatgcctttaagagca
agtaacttccattaccatgagctgaagcacatagtgtttgtaggctcactggagtatctg
aggagagaatgggaaacccttcataacttccccaaggtctccatcttacctggcacacca
ttaagtcgagctgatttaagggctgtaaacatcaacctctgcgacatgtgcgttatcctg
tcagccaatcagaacaatatcgacgatgcttcactgcaggataaggaatgcatcttggca
tcactcaacatcaaatctatgcagtttgatgacagcattggggtcctgcaggctaattcc
caaggttttacacctcctggaatggatagatcgtctccagacaacagtccagtgcacggg
ttggttcgccaggcgtctgtcactactggctccaacatcccaatcataactgaactagtg
aatgattcaaatgttcagttcctggaccaagatgatgatgatgacccggatacagagctg
tatctcacccaaccctttgcctgtgggacagcttttgccatcagtgtgctcgactctctt
atgagcgctacgtacttcaacgataatatcctgacgctgatccggacgctggtgacagga
ggggctacgccggagcttgaggcactgttggccgaggagaatgctttgcgtggaggatat
agcacgccacagacgctagctaacagggacaggtgtcgcgtggcacagctcgccctctac
gatggcccttttgcagacttgggggatggtggctgttatggggacttgttttgtaaagca
ttaaaaacctacaacatgctgtgctttggaatctatagattaagagatgcacacctaagt
gcaccgagccagtgcacaaaaaggtatgtcatcaccaacccaccctatgagttcgagctt
gttcccacagacctgatcttctgcctgatgcagtttgaccacaacgcaggtcagtcgcga
accagcctgtcccattcctcccattcctcccactcatccagcaagaagagctcctcagtt
cactcaatccctaccaccaaccggcccaaccgcagcagcaagacccgcgaaagccgcgaa
aaacacaatgcaacaaggatgaatagaatgagccaagaaaagaaatggtttacagatgaa
ccagaaaatgcctacccaaggaacattcaaatcaagcccatgagcactcacatggccaat
caagtcaatcagtacaaatccactagcagcctgattccaccgatcagagaagttgaagat
gaatgctga
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