Tachysurus fulvidraco (yellow catfish): 113640060
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Entry
113640060 CDS
T08119
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113640060 (cacna1bb)
04020 Calcium signaling pathway
113640060 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113640060 (cacna1bb)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113640060 (cacna1bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113640060
NCBI-ProteinID:
XP_026998189
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All DBs
Position
21:complement(17729118..17853684)
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AA seq
2304 aa
AA seq
DB search
MSRMARFGDDASGRYGPAPGAGRGGARPGGAPGTQRLYKQSMAQRARTMALYNPKQTKQN
CFTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPVNDKTPMS
ERLDDTEHYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNVMDFVVVLTGILAKVGSDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVELYMG
KFQKACFKQGTEELAADYPCGPDSPSRLCPNGTECRIGSAWKGPNYGITNFDNILFAILT
VFQCITMEGWTDILYDTNDALGNTWNWMYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYKRKQNNPV
LKRAKVKKGKNDLISAEEGEEHFTDISSVAPPGSPFARASLKSNKNESSSYFRRKEKRAR
FFIRRMVKAQSFYWIVLCIVGLNTLCVAMVHYDQPKGLTKALCWAEFVFLGLFLCEMTLK
MYGLGPRNYFHSSFNCFDFGVIVGSIFEVVLATSQNGASFGISVLRALRLLRIFKVTKYW
NSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDNETPTTNFDNFPSA
IMTVFQILTGEDWNAVMYHGIESQGGVPLGMFSSVYFIILTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEEEQEEAAKKSIALQKAMEVKEVSPMSAANISIAAFVKQNRDVLSRSSSVS
SVHSLKEQTRSLQKMSIWEQRTSQLRRHNLRNSSEALYSELEPEDRLRMSSALHLRPDMK
AHHDRPLLVDKSHPPDGTDTLEEAPANKHHRCRGENRESVEGRRHRHHRGSEHRGHQDGG
HRNQTEDCDDDREHHHHHSHRSRETDGDSSNGVKGERNLRGHREGEAGNGERRRHRPRIK
AQTTLDKEENRDNKERDTPSHRDRLNDAEGDGLSLSPVPSPTERQEDSDNLKNSTKARST
AVSIPVTVTAPPGDTTIIPMNNIDGERLLLNEEKKDLDELNQNAPKRILPYSSMFVFGQS
NPVRRLCHYVVNLRYFEMCILVVITMSSIALAAEDPVNTTAFRNNVLKYLDYIFTGVFTF
EMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACTSFMGGTKGKDINTIKSLRV
LRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCT
DESKATEKDCRGQFLDYDGDKVEAKARVWKKYDFHYDNVLWAFLTLFTVSTGEGWPMVLK
HSVDATHEDHGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSL
EKNERACIDFAINAKPLTRYMPQDKQSFQYKMWKFVVSTPFEYSILTMIAINTVVLMMKF
STASKPYEDMLKWLNIIFTALFTLECILKIIAFGLLNYLKEAWNIFDFVTVLGSITDILV
TEIMTQNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIELSYDSAINHHNNFQTFFQALMLLFRSATGEAWHDIMLSCLGGKKCDK
LSGSNDNGCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFI
RVWADYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPSRVAYKRLVRMNMPIADDNTVHF
TSTLMALIRTALDIKLASGVLAQCLCDADLKREINKVWPNLSSKTVDLLVTPHKHNELTV
GKVYAALMIFDYYKQNRAKRLQEQQSTSGALGKMGSLFKPMLPLTHIHDQEPSLRSGKLQ
PPSQTDSSPHPEFMPTTPLLTNGEPAKSSTMKISHSAETLQEGKNSVYSEDVPKTESQEL
VEMTDMENNSDVVGFSTLEGHGRAASMPRLSAGFQRSQLRHTTGMYLAPITDSSPMRRSA
SSLASQRGGTELNLRDYTLERPPAAQTQEKERDKVHQHHHHHHHRCHRRRDKKHKSLDRA
ISEEQPASLDPAPDLITDPRDRAREWDRDRGRSQERKHHSSSAPDRKQRYYSCDRYGNRE
HFHSRSPGPSRSTSPGDPQEPNRFKTGVNSAKGSSMVFTSGTSTPCRGRRQLPQTPLTPR
PAVAFKSTSSSPLQMAATRSSGPVPTYLSRGQSEHDALLGITHQPSPVPVTRIGSDPNLG
PLQRDPHLSEAEDFHDALSTYSSGRFPRTVSATHSSTGAVPSMLQQSQSGVPNGYHFTLG
VSTSLGSSTRISPSYHDTDKDDWC
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggatggctcgtttcggcgacgacgcgtctgggcgctatggacctgcaccgggc
gcggggagaggaggtgcgcggccgggaggcgcaccgggcactcagaggctctacaagcag
tcgatggctcagagagcccggacaatggctttgtataaccctaagcagactaagcagaat
tgcttcactgtcaaccgctcgctgttcatcttcagcgaggacaacgtgatccggaaatac
gccaagaggatcaccgagtggcctccatttgaatacatgatccttgcaaccatcattgcc
aactgtattgtactggcgttggagcaacatctgccggttaatgacaagacacccatgtca
gaacgcctggacgacacagagcattactttatcgggatattctgtttcgaggctggcatt
aagatcatcgccctgggctttgtctttcacaaagactcctaccttcgtaacggctggaac
gtaatggacttcgtggttgtcctcaccgggattttggccaaggtgggttcggattttgac
ttaaggacactgcgggctgtacgagtgctgagacctctcaaactggtgtcaggaatccct
agtctacaggtggtgttgaagtccataatgaaggccatggttcctctgctgcagatcggc
ttgctgctcttctttgccattgtcatgttcgccattataggagtggaactctacatgggc
aagtttcagaaggcatgcttcaaacagggcacagaggagcttgctgctgattacccatgt
ggcccggattctccatctaggctgtgtcccaatggcacagagtgtagaataggcagcgcg
tggaaagggccaaactacggcatcactaactttgacaacatcttgttcgccatactcact
gttttccagtgcatcaccatggaaggatggaccgatatcctttacgacaccaatgatgcc
ttgggcaacacatggaactggatgtacttcatccccctcatcatcatcggctccttcttc
atgctcaacctagtgctgggtgtcttatcaggagaatttgccaaggaaagagaacgtgta
gagaagagacaggagtttctgaagctacgcaggcaacaacaaattgagagagagttgact
ggctacctggagtggatatgtaaagcagaggaggtgctgctggcagaggaagaccagaat
gcagaagagaaatctccactggatggagcgtggtacaagaggaaacagaacaatccggtg
ttgaaaagagcaaaggtcaagaaggggaagaatgacctcatcagtgccgaagagggtgag
gaacactttacagacatttcttcagttgcaccccctggatctccctttgcccgggccagc
ctgaaaagcaacaagaacgaaagctcatcatacttccgccgcaaggagaaacgagcgcgc
ttcttcattcgccgcatggtgaaagcccaaagcttctactggattgttttgtgcatagtg
ggcttgaacacgctttgcgtggccatggttcactacgaccagcctaaggggctcaccaaa
gcactctgttgggcagagtttgtgttcctgggtctgtttctatgcgagatgacgttgaag
atgtacggcctggggcccaggaactactttcactcctcattcaactgctttgactttggg
gtcattgtggggagtatatttgaggtggtgttggcaaccagccaaaatggagcctctttc
ggtattagcgtcttgagggctctacgcttgctccgaatatttaaagtgaccaagtattgg
aactctctgaggaatctggtggtgtctctgctcaactcaatgaaatccattatcagcttg
ctcttcctcctcttcctctttattgtggtctttgctttgctgggcatgcagctctttgga
ggacagtttaattttgataacgaaacacctactaccaattttgacaacttcccttctgcc
ataatgaccgtatttcagattttgacaggagaagactggaatgccgtgatgtatcatggg
attgagtctcagggcggcgtcccgcttgggatgttctcctccgtttacttcatcattctt
actctctttggaaactacactcttcttaatgtgttcttggctatcgctgtcgataacctt
gccaatgctcaggagctgacaaaggatgaagaggagcaagaggaagcagccaaaaagagc
atagcactgcagaaggccatggaggtgaaggaggttagcccgatgtcagcagctaacatt
tccatcgcagcttttgtaaagcaaaatcgagatgtgctctctcgcagctcttccgtcagc
agcgttcactcactcaaagagcagacgcgctcactccagaaaatgtctatctgggagcag
cgcacttcacagctacgtcgccacaacctgcgcaacagcagtgaagcactgtacagcgaa
ctggagccggaagatcggctgcgcatgtcctcagcgctacacctgcggcccgatatgaag
gcgcaccacgatcggcccttgctggtggataaatcgcacccaccggatggcacggacacc
ctcgaggaggcacctgcaaacaaacaccaccggtgccgtggagagaaccgagagtctgta
gaaggacgccgacatcggcaccatcgtggcagtgaacacagagggcaccaggatggagga
cacaggaaccagacagaggattgtgatgatgacagggagcaccatcaccaccattctcac
cgctcccgtgagactgatggtgatagcagtaatggagtgaaaggagagagaaatctgaga
ggccacagagagggtgaagcaggaaatggtgagaggaggagacacaggcctcgcatcaaa
gctcaaaccacacttgacaaggaggagaacagggacaacaaagagagagatactccaagc
cacagggacaggcttaatgatgcagagggtgatggcttgagcttgagtcctgtcccctct
cctactgagagacaagaggattcggataaccttaaaaacagcaccaaggctagatcaaca
gcagtcagcatccctgttacggtcactgccccaccaggagacaccaccatcattcccatg
aataacatagatggtgagcgccttctcctgaatgaggaaaagaaggatctggatgagctg
aatcagaacgctccaaaacgcatcttaccctacagctctatgtttgtgtttggtcagtcc
aatcccgtacgaaggttgtgtcactatgtggtgaacttgcgttactttgagatgtgcatt
ctcgttgtgattaccatgagcagcatcgcactggctgctgaagaccctgtgaatactact
gcttttcggaacaatgtgctaaaatacttagattacatctttaccggcgtgttcacattt
gaaatggtgataaagatgattgacctcggactgcttctccaccccggctcctacttcaga
gacctgtggaatattctagacttcattgtggtcagcggtgccctggtggcttttgcctgc
acgagcttcatgggagggaccaaaggcaaggacatcaacaccatcaaatccctcagggtc
ctccgtgtgctccggcctctgaagaccatcaaaaggctacctaaactaaaggctgtgttc
gactgtgtggtgaactctctgaagaacgtgcttaacatcctcatcgtctacatcctcttc
atgttcatctttgccgttatcgccgtgcagctcttcaagggaaaattcttctactgcaca
gacgaatctaaagctactgagaaggactgcagaggtcagtttctggattacgatggagac
aaagtggaagccaaggcacgtgtatggaagaaatatgattttcactatgacaacgtgctg
tgggctttcctcactctcttcaccgtttccacaggagagggttggcctatggtgctgaaa
cattctgtagatgccactcatgaagaccatggcccaagcccaggcttccgcatggagatg
tccatcttttatgtggtctactttgtggtcttcccgtttttcttcgtcaacattttcgta
gccttgatcatcatcacgttccaggagcaaggggacaaagccatgtctgagtgcagcttg
gagaagaatgagcgggcatgcattgactttgccattaatgccaagcccctgactcgctac
atgcctcaggataagcagtccttccagtacaagatgtggaagtttgtggtttcaacaccg
tttgaatattccatcctgactatgatcgcaatcaatactgtggttctcatgatgaagttt
agtaccgcttcgaagccttatgaagacatgctgaagtggctgaacatcatcttcactgcc
ctttttaccctggaatgtatcctgaagatcatcgcttttgggctgctgaactatctaaag
gaagcctggaacatattcgattttgtaacagtactgggcagtatcactgacatcctggtc
actgaaattatgacgcagaacaagctgatcaatcttagctttctgaggctgtttcgagct
gctcgtctcatcaaactcctgagacaaggctacaccatccgtatcctgctctggaccttt
gtccagtcatttaaggcactgccatatgtgtgtctgctcattgccatgctcttctttatc
tacgccatcattgggatgcaggtgtttggaaacattgagttaagctatgattcagcaatc
aatcatcacaacaacttccagaccttctttcaggcactcatgctactcttcagaagtgcc
acaggcgaggcgtggcatgacattatgctgtcatgtttgggtggcaagaaatgtgacaag
ctctcaggttccaatgacaatgggtgtggcagtgattttgcatacttctattttgtctcc
ttcatcttcctctgctccttcctgatgctaaatttgttcgtggctgtcatcatggacaac
tttgagtacttgacgcgagatgcttccatcctcggtcctcaccatctggatgagttcatc
cgcgtctgggcagattacgaccctgctgcctgtgggcgcatatcctacctcgatatgtac
gaaatgctgcgtcacatgtcccctccgctaggtttgggaaagaaatgtccatcacgagtt
gcctacaagcgcttggtgaggatgaacatgcccattgctgatgacaacacagtccacttc
acatccacgctgatggctctcatacgcaccgccctggatatcaaactggcatcaggtgtt
cttgcccagtgtctctgtgatgctgacttgaagagggagataaataaagtgtggcccaac
ctgtcatccaaaaccgtggacttgctggtgacaccccataaacataacgagttgacggtt
gggaaagtgtatgctgcgctgatgatctttgattactacaagcagaatcgagccaaaaga
ctccaggagcagcagtccacttccggagcactgggtaaaatggggtctctgttcaagccc
atgttgcccctcactcacatacatgatcaagagccatcactcaggagtggcaaactgcaa
cctccttcccaaaccgattcatctccacatccagaatttatgcccacaacccctctcttg
accaacggggagccagcaaaaagcagtaccatgaagatttctcattcggcagagacgctt
caggagggcaagaattctgtctattcagaagatgtgccaaaaactgaatctcaggaatta
gtagagatgacggatatggagaataattctgatgtagtgggtttctccacactggagggc
cacgggagggcagcctcaatgcccagacttagtgcaggcttccagcggagccagttgcgc
cacaccaccgggatgtacctagcacccatcacggacagcagtcccatgcggcgttcagcc
tcttctttggcttctcagagaggaggaacagagttgaatttgagggactatacgttggag
cggcccccggcagcacagactcaggagaaagaaagagacaaagtgcaccaacatcaccat
catcatcatcatcgatgtcaccgccgccgagacaagaagcataaatcccttgaccgagct
atcagtgaagaacagcctgcctctttggatccagcaccggatctaatcactgatccgcgg
gatcgagcacgtgaatgggacagagaccgaggtcgctctcaagagcggaagcaccactcg
tcctctgccccagatagaaagcaacgttactattcctgtgatcgttatggaaacagagag
cactttcacagccgatcacctgggccaagcagatcgacatcacccggagatccacaagaa
cccaacagattcaaaacgggtgttaactcagctaagggtagctcgatggtctttacctca
ggcaccagtacaccatgccgtggacgaagacagctccctcagacaccgctcaccccaagg
cctgcagtggcctttaagtctaccagctcttctccattgcagatggctgccacacgctca
tccgggccagtccccacctacctgagtcgagggcagtcagagcacgatgccttgctcggc
atcactcaccaaccatctcctgtgcctgttactcgaatcggatctgaccccaacctcggc
cccctgcagcgagacccacacctgtcagaggccgaagatttccacgatgctttgagcacc
tacagctcaggacgttttccaagaacagtctctgccacccattcatccacaggggcggtg
ccatccatgcttcagcagagtcagagtggagtacctaacgggtaccactttacccttgga
gttagtacatctctgggctccagtaccaggatttccccaagctatcatgatacagataaa
gatgactggtgctga
DBGET
integrated database retrieval system
