KEGG   Tachysurus fulvidraco (yellow catfish): 113640063
Entry
113640063         CDS       T08119                                 
Symbol
whrna
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tfd03037]
    113640063 (whrna)
Cilium and associated proteins [BR:tfd03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   113640063 (whrna)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 USH1C_N T15H9-4_C HHD_RTEL1 PAH_ZNF598
Other DBs
NCBI-GeneID: 113640063
NCBI-ProteinID: XP_026998201
LinkDB
Position
21:complement(17542791..17635094)
AA seq 928 aa
MSADLERVSLSSSSAGSLASSARSLSANVRKLHDALNLLLSELEREQFVHCLNVYHAKRN
VYDLVQTLKVILDAPSKRQLLPMLRLVIPRSDQLLFDRYTSEGLYLKSDLLPSRNGEHET
SVSGSANNATLTRLPLRSSPDHQSAGSDGTSTALVPLLGRHFLPEPPGEVRQVTLKRHKS
NEGLGFSIRGGSEHGVGIFVSLVEPGSMAEKEGLRVGDQILKVNDKVFDRFTHAEAVKVL
KGNKKLCMSVRSMGRIPGGYVTNHVYTWVDPHGRSVSPPPDLMEHHSATLNRNQGKQRSH
MQLLEDGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDRGSAAECGGLKVGDQILE
VNGRSFLSIPHDEAVRMLKSSRHLMMTVKDVGRLPHARTVVGETKWIASSQITDSSASSS
VAGLSMDQGASASGKMGFYKGVAGSQVTLSSLVNQSKAMLEEQARHLLTEPERQTMSYYI
QEYNRGHVGVEQLVMALFELLNTQAKFSLMSEMRGLISAQDLERFDALVLRKEIEALKAR
QGAAGGSALHTDSFSMVSYPDTLASSSGSYMTSTTLSSARERLLWLIDMMENDSAVETNG
EDALESRNALPDVSLDEMGSTSESPPSFKPPPPPRVQRRPSRKPAPSKRPTSDSSNSDLH
FTAHSHSPTKDYTQSKQPSGGPKKEPPLAQLSMVSQHLIGPFPRVQSPNRLKPPPAPAVP
APLAPPLPPSPEKPKTTPSSPSSNQHFVMVEVHRPNAEPDVNEVRPLPQSRGSTLSQLSD
SGQTLSEDSGVDIAESGRMSKESSPRPTRTRPLRESAGGGEGSTVKPPGLLEPMSTLVRV
PKSANTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGQVILEVNGISLRGREHRE
AACLIAEAFKTKEKEYIDFLITEFNVAL
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgagcgcggacctggagcgcgtgtcgctgagctcctcgtctgcgggctcgttggcttcc
agcgcgcgctcgctctccgctaacgtgcgcaagctgcacgatgcgctcaatttgctgctc
agtgaactcgagcgcgagcagttcgtgcactgcttgaacgtgtaccacgctaagcggaac
gtctacgacttggtccagacgctcaaagttatccttgacgccccgagcaagcgacagctg
cttcctatgctgcgcctggtcatcccgcgctccgatcagctcctgtttgatcgctacacc
tccgagggactgtatttaaagtcggatttgctgccgagtagaaacggggagcacgagacc
tccgtgtccggctctgcgaataacgctacgctcacgcgtttacctctgcgcagttcccct
gatcaccagagcgccggcagcgacgggacatctactgcgctcgtgccgctactgggcaga
catttcctacctgaacccccaggtgaggtcagacaggtgacactcaagcgccacaaaagc
aacgagggtttaggcttcagcatccgtggtggatccgagcatggggtcgggatcttcgtg
tctctcgtggaaccgggatccatggctgagaaagagggactaagagtcggtgatcagatc
ctcaaagtgaacgataaagtgttcgacaggttcacacatgccgaggctgtgaaggtactg
aagggcaataagaagttgtgcatgtcagtgcgctccatgggtcgcatcccaggcggttat
gtcacaaatcacgtgtacacgtgggtggacccgcacggccggagcgtctctcctccccca
gacctgatggagcaccacagcgctaccctgaacagaaaccagggcaaacagcgcagccac
atgcagctgctggaagacggagatgagaagaaggtgaatctggtgctggatgatggtcgt
tctctgggtctgatgatccgtggtggagccgaatacgctctggggatctacatcaccgga
gttgacagaggttctgcagcagagtgtggagggctgaaggtgggagatcagattctggag
gtgaacgggcggagcttcctgagcattcctcacgacgaggcagtgcgcatgctcaagtct
tcacgccacctcatgatgaccgtgaaagatgtgggacgactgcctcacgcccgcaccgtg
gtaggagagaccaagtggattgccagttcccagatcacagacagctcggccagcagcagt
gtagcaggtctttctatggatcaaggggcttcagcctcaggaaagatgggtttttataaa
ggagtagccggctctcaggtgactctctccagtctggtgaaccagagtaaggccatgctg
gaggaacaggccagacaccttctgactgaacctgagagacaaaccatgagctactacatc
caggaatataacagaggacacgttggagtcgagcagctggtcatggccctctttgagctt
ctcaacacacaggccaagttctcccttatgtctgagatgcgggggctgatcagcgcacag
gatctggagcgttttgatgcacttgtgctccgcaaggagattgaagctctgaaggctcga
cagggagcagcaggaggttcagcacttcacacagactccttctcaatggtttcctaccca
gacacactggcctcctcctcaggcagctacatgaccagcaccacactcagctctgcacgg
gagcgactgctgtggttgattgatatgatggagaatgacagcgcggtggagactaatgga
gaagacgccctggagagtagaaacgcccttccagacgtctctctggatgagatggggtca
acttcagaatccccaccttccttcaagccccctcctccccctcgcgtacagcgccgcccc
agtcgtaaacccgcccctagcaaacgccccacgtccgactcctctaactctgacctgcac
ttcaccgcccattcccactcacctaccaaagactacacacaatccaaacagccttcgggt
ggcccaaagaaagagcctccattggctcagctctccatggtgagtcagcacttgatcggt
cctttcccacgtgttcagtcccccaacaggttgaaacccccgccagcacctgcagtccca
gctccccttgcacctcctctgcccccgagtccagaaaaacccaaaaccacaccctcctcc
ccatcctccaaccagcactttgtcatggtggaggttcacaggcccaacgcagagcctgac
gtcaacgaggtcagaccacttcctcagagcagagggtccacactgtctcagctctctgac
agcggacagacgctgagcgaggacagcggcgtggacatcgcagagtcgggacgcatgagc
aaggaaagcagtccacgtcctacccgaactcggccactgagagagagtgcagggggaggg
gaggggagcactgttaaaccgcccggcctgctggaacccatgtcaactctggtgcgagtg
ccgaagagcgccaacacgctgggtatcgctattgaaggaggagccaacacacgccagcct
cttccgcgcatcgtcaccatacaaagaggaggctcggctcataactgcgggcagctgaag
gtgggccaggtgattctggaggtgaatgggatctctctgagaggacgagaacatcgagaa
gcagcctgcctcatcgcagaggccttcaagaccaaagagaaggaatacattgacttcctc
attacggagttcaatgtggcgttgtaa

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