Tachysurus fulvidraco (yellow catfish): 113640351
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Entry
113640351 CDS
T08119
Symbol
trpa1a
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a isoform X2
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113640351 (trpa1a)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113640351 (trpa1a)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113640351
NCBI-ProteinID:
XP_026998616
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Position
22:12835037..12847108
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AA seq
1103 aa
AA seq
DB search
MDSSRTLLKFTHEYESLMEMDRNSGTSLNVFEFALKGDAPALEGDVSNLGMRDDGGASPL
HYASSKGHIRVINLIVQIAGSQELDIVDDDGNTPLHWAVQQDQLGSCSLLLSLGANPNIL
NKAALSPLHLAVSLRHNHIVEQLLTHSETDVNLEGDLGNTPLILAASLDNHEALLMLQKN
GARLCCQNKLGLFPIHAAAFAGAKRSMEIVLQKGEELGVPIERHINYVDKSISSPLHLAV
RGGNLEVIKLCINHGAKIDQQQCDKSTALHLACTQGATEAVKVMLQAYKRVCDIINITDG
ALQSPLHKAAIFDHYELVEYLISQGADIDFIDCKGHSPLLLATNCGAWRSVTLLLSHGAD
LTVKDKAGCNFLHLAILQPRGLKNLPPEILQHESVRELLNDEDSEGCTPLHYACRLGIPD
SVKNMLGLDVSLDQKSKQKKSALHFAAEYGRINTCHRLLETMTDTRLLNEGDEKGMTPLH
LASRGGHVKVVELLLRKGALFHSDYKGWSCLHHAAAEGYTQTMDSLLISNIKLLDKTDAD
GNTALHLAARAGHVVAVRLLLNRGAQILLNRSDASFLHEAIHNGRKDVTIAVIDSGRCEE
AISTFKLNSAKHCAVLDMIEFLPECFKHLLDTCIKESEEDVNSCSYYLEYNFQWLQQPIE
YAVKMENSENEDEYKPLAALNAMVEFNRVDLLTHPVCKKYLEMKWSAYGIKAHLLNMIIY
TLGVFPLTYLIVNLRPNMSVEKNVTTVNMVTKPLNQQCYFITTCMFLVLAMNLYAVGKEV
VQMCQQRLKYLQDMSNVLDWAATICSLLFVTPLLLNVKKTWHWQAGALASLISWVNLLLY
LQRFQRFGIYVVMFREICRTLLSIIVIFVYLILAFALAFYALMIKQKHFGRVFLSLMQTF
AMMAGEINYQDNFLKPYIAQQLPFPILTYLIFAWFVLLVPILLMNLLIGLAVGDIAEVKN
NACLKQIGMQIELHTNLEERLPHWFMKRVDQISVKDFPNKCYKGKRWFICGHEVNKVRAR
LCSSTRQSTQLERELMKQKHRLKDLTESMDKQHNLLKLIVQKMEINSEAEEHDGPRVVHD
FTYKLSAKSKWGPLLRAVTAKRK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggattcctccaggactctgctgaagttcactcatgagtatgagagtctgatggagatg
gacagaaacagcgggacgtcactgaacgtctttgagttcgctttgaagggtgacgccccg
gcgctggaaggtgacgtgagtaatctgggcatgagggacgacggcggtgcctcaccgctg
cactacgcctcctctaaaggccacatccgggtcatcaacctcattgtacagattgccggc
tctcaggagctggacattgtggatgatgatgggaacacacccctgcactgggccgttcag
caggatcagcttggtagctgttcgcttctgctgagtctaggcgcgaatcccaacatcctg
aacaaagcggcgctctcaccactgcacctcgctgtcagcctcagacacaaccacatagtg
gagcaactgctaacacacagtgagacggacgtgaacctcgagggtgatctgggaaacacg
cctttaattctggctgcttcattggacaaccacgaggcacttctcatgctgcaaaagaac
ggtgccagactgtgctgccagaacaagctgggtctcttccccatccatgctgctgccttc
gcaggagccaagaggtccatggagattgttctccaaaaaggagaggaactgggtgtgccc
attgagagacacataaactacgtggacaaatccatctccagtcctcttcacctggccgta
cgtggaggaaaccttgaggtcatcaagctctgtatcaatcatggagccaaaatcgaccaa
cagcagtgtgacaaatccaccgctctgcacttagcctgcactcagggagccactgaagct
gtgaaggtgatgctccaggcgtacaagagagtgtgtgacatcatcaacatcacagatgga
gctctccaatcaccgctacataaggcagccattttcgaccactacgagctggtggagtat
ctaatctcacagggagctgacattgactttatcgactgcaaaggccactcgccactgctg
ctagcgacaaactgtggtgcctggagaagcgtgaccctgctgctgtcacatggtgctgat
ctgacggttaaagacaaagccgggtgcaacttcttgcatctcgccatcttgcagcctcga
ggtctgaagaaccttccacctgaaatactgcagcatgagagtgtgagagagctgctgaat
gatgaagactcagagggctgcactcctcttcactatgcctgcaggctgggaatccctgac
tcggtgaagaacatgctcggtctggacgtctcacttgaccaaaagtccaagcagaagaaa
tctgccttacactttgcagctgagtatggaaggatcaacacatgtcaccggctcctggag
accatgacagacacacgtctgcttaacgagggagatgagaagggcatgacaccgttacac
ctggcttcacgcggcggccatgttaaagtggtcgagctgctcctcaggaaaggtgccctg
tttcacagtgattataaaggctggtcctgtttacatcatgctgcggctgagggatacaca
cagaccatggacagcttactcatctccaacatcaagctcctggacaaaaccgatgcagac
ggcaacacggcgctgcacttagctgctagagctggacacgttgttgctgttcgcctgctg
ctgaaccgtggagcgcagatcctgctgaaccgcagcgatgcctccttcctgcatgaagcc
attcacaacgggaggaaagatgtcaccatcgccgtgatcgacagcggcaggtgtgaggaa
gctatcagcacgtttaaactgaactcagctaaacactgtgctgtcctggacatgatcgag
tttctgcctgagtgcttcaagcatctcttagacacctgcattaaagagtcagaggaggac
gtgaactcctgcagctactacctggagtataatttccagtggcttcaacagcctatagag
tatgcagtgaagatggagaattcagagaatgaagacgagtacaaacctctagctgcactc
aatgccatggtggagtttaatcgtgtcgacttgctgactcatccagtgtgcaaaaaatat
ctggaaatgaaatggagtgcctacgggattaaagctcacctgctgaatatgatcatatac
acactgggagttttcccgctgacttacctgatcgtcaatctgcggcccaacatgagcgtg
gagaaaaacgtgacgactgtcaacatggtcactaagccccttaatcagcaatgttatttc
atcacaacctgcatgtttctggtcctcgccatgaatttatacgcagtcggcaaagaagta
gtgcagatgtgtcagcagaggttaaagtacctgcaggacatgtcgaacgtattagactgg
gcagcgaccatctgttctctgctcttcgtcactcctctcctgctgaatgtaaagaagaca
tggcactggcaggctggagctctggcgtctctcatctcctgggtcaacctgctcctctac
ctgcagcggtttcagaggtttgggatatacgtggtgatgtttcgggagatctgcaggacg
ctgctgagcattattgtgattttcgtctatctgatcctggctttcgctctggccttctat
gctctgatgatcaaacagaaacattttggccgtgtgtttctctcgttaatgcaaacattc
gccatgatggcaggagagatcaactaccaggacaacttcctgaaaccctacatagcccaa
caacttcccttccccatactgacgtacttgatcttcgcttggttcgtcctgcttgtgccg
attctgctcatgaacctgctaatcggtttggctgttggagacattgcagaggtgaagaac
aacgcctgtttgaaacagataggaatgcagattgaacttcacactaatctggaggagcgc
ctgcctcactggttcatgaaaagagtcgaccaaatctctgttaaggattttcctaacaag
tgctacaaaggcaagaggtggttcatctgtggacatgaagtgaacaaagtgagagcacga
ctctgttccagcacacggcagagcacacagctggagagagagctcatgaaacagaaacac
agactgaaggacctcaccgagtccatggataagcaacacaacctactgaagctgattgtg
cagaagatggagatcaactctgaggcagaggaacatgacgggccccgagttgtgcatgac
ttcacatacaagctcagtgccaagagcaagtggggaccactactgcgtgccgttacagcc
aagaggaagtga
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