Tachysurus fulvidraco (yellow catfish): 113640378
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Entry
113640378 CDS
T08119
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113640378 (prdm1a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113640378 (prdm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
STL11_N
Motif
Other DBs
NCBI-GeneID:
113640378
NCBI-ProteinID:
XP_026998650
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All DBs
Position
22:complement(15171034..15181493)
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AA seq
748 aa
AA seq
DB search
MCGWNQSLSAASQHSSVMLTTEGAPNTVDQVDPKMIVEDADMSKWTEAEFEEKCTYIVKD
HTWEGADKPDLPRAQTSLPRNLAFRYAPDSKEVIGVVSREYIPKGTRFGPLVGESYTAED
VHKDANRKYFWRIYAEGKFHHFVDGLDEEKSNWMRYVNPAHSQQEQNLAACQNGMNIFFY
TVKAIPADQELLVWYCTDFAHRLHYPPSGDLMMEKLKQSLIEAKQQASEEKPVVKREHTV
SEILKDTWREPARPLPTRPHCPVSPDRPIYPRVIYPIRPQHHLREDILKSSQSICFATRS
PALSSATPSPSARSSPETTPGNSPTPADPRDALPLYSGSLGHYPGYSPSNPLSSFYPNPH
YLFAPYSMSGTPPMGSVFSRMYPLYNTLMTPHMPLPHTMLPPEQGRHFLLPPHRDFLLPP
PKSAFSRATTPKDKTLHGHPHAPVSGSPTAGSAVSVDQQPANPTSAQPSIRRSDEEAINL
SKMKRGPAGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCN
KGFTQLAHLQKHFLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFT
QFVHLKLHKRLHTRERPHKCPHCHRNYIHLCSLRLHLKGYCLAAMPSPHCSLDELNRINE
EIERFDISDNADRLEEIEGVDIERLVEKQIFSVICHEMDLKASYHKGSTGADLLPSSSTY
SLYEPSETSVIKLLPVKVKQETMEAMES
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggctggaaccaaagtctgtcggccgcctctcagcatagctctgtcatgttgacc
actgagggcgccccgaacaccgtcgaccaggtggatccgaagatgatcgtcgaggacgcc
gacatgtccaaatggacggaagccgagtttgaagagaagtgcacgtacatagtgaaggac
cacacgtgggagggtgcggacaaaccggatcttccccgtgctcaaacctcgctgccgaga
aacttggcattcagatatgcccctgactccaaagaggtgatcggtgttgtgagccgagag
tacataccaaaaggaactcgctttggccctctagtgggagaaagttacacagcagaggat
gtccacaaggatgccaacaggaagtacttctggaggatttatgcagaaggaaaattccat
cactttgtagatggcctggatgaggagaagagcaactggatgcgctatgtgaatccagca
cactcacagcaggagcagaatctggctgcttgccagaacggtatgaacatctttttctac
acggtgaaggccattcctgctgaccaggagttgctggtgtggtactgcacagattttgca
catcgtctccactaccctccctcaggagacctcatgatggaaaagctcaagcagagtctg
atagaagcaaagcagcaggcatcagaagaaaaacctgttgtgaagagagagcatactgtc
tcagaaatcctcaaagacacatggcgggagccagcaagaccactgcccactcgtccccac
tgccctgtcagccctgacagacccatctacccccgtgtcatctacccaatccgcccccaa
catcacctcagagaggatatcttaaaatccagtcaaagtatctgttttgccactcgttca
cctgcactgtcctcggccacccctagcccatcagcacgcagcagccctgaaaccactcca
ggaaacagtcctaccccagcagatcctagggatgccctgccactctacagtggcagccta
ggtcactatcctggttactccccgtccaatcccctttcctcattttaccccaacccacat
tatctatttgccccttattccatgagtggaacaccacccatggggagtgtgttctcccgc
atgtaccccctttataacactttaatgacaccccacatgcccctcccacacaccatgctt
ccacctgagcaaggtcgacattttctgctaccaccccacagggacttcctgcttccaccg
cccaagagtgccttctcaagagcaacaaccccgaaagacaaaaccctgcatggacaccct
catgcccctgtcagtggttctcccacggctggttctgcagtctctgtcgatcaacagcct
gccaacccgacctcagcgcagcctagcatccgacgttcagatgaagaggcaatcaatctc
agcaagatgaagcgaggccctgcaggatacaagaccctgccgtacccattgaagaaacag
aatggcaagataaagtacgagtgcaacgtatgcagcaagaccttcggacagctctcgaac
cttaaggtgcacctgcgtgtccacagtggcgagcgcccttttaagtgtcagacgtgcaat
aagggcttcactcagctggcacacctgcagaaacacttcctggtccatacaggagagaag
ccccatgaatgccaggtatgccacaagcgtttcagcagcacaagtaatctgaagactcat
ctaaggctgcactcaggtgaaaaaccttatcagtgcaagctatgtccagctaagttcaca
cagtttgtccacctcaaactgcacaaacggctgcacacacgtgagcgcccccacaagtgt
ccacactgccaccgcaactacatccacctctgcagcctgcgcctccacctcaagggctac
tgcctggctgctatgccttccccccactgcagccttgatgaactgaaccgcattaatgaa
gagattgagcgctttgacatcagcgacaatgctgaccgactggaggagattgagggtgtt
gatatagagaggctagtggaaaagcagatcttcagtgtgatctgccatgaaatggacctc
aaggcatcataccacaaaggcagcactggagcggatttgcttccttcatctagcacctac
agcctgtatgagccaagtgaaacatcagttattaaactcctacctgtcaaggtcaaacaa
gagactatggaggcaatggaatcttag
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