Tachysurus fulvidraco (yellow catfish): 113640466
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Entry
113640466 CDS
T08119
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113640466 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113640466 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113640466 (mgrn1b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113640466 (mgrn1b)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113640466 (mgrn1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113640466
NCBI-ProteinID:
XP_026998738
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Position
24:17188865..17199251
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AA seq
539 aa
AA seq
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MGSVLGRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDGDSPTEEGAKPKSLYGV
EFTFDSDARVAITIYCQAFEEFSNGMAVYNPKSPAMVSETVHYKRGVSQQFSLPSFKISF
SEWKEEDLNFDLDRGIFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSSSDSVPP
GFEPISLLEALNGLTAMSPAVPSAPLYDEINFSGSLSGDSRQLSSPEHSGESSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEISDAQAHTLLSSSPAPTECTGPEDAPDSLSPEDEDR
VNSDGEILPECISERSSLTKAESDTPGSSGSMESLITRTTSCSSQPLLCPMSSLHMEDE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtactgggccggaggatcgccggggtggaggatatcgatatccaggccaat
tctgcttatagattccctcctaaatctgggaattactttgcaagtcacttcttcatggga
ggggagaagtttgacacccctcatcctgaaggttacctgtttggcgagaacatggatctc
aatttcctaggcaaccgtccggtgcagtttccgtacgtgactccggcaccacatgagcct
gtgaagaccttgaggagcctggtcaacataaggaaggactccctgcgcctcgtcaggtat
aaagatgatggtgattcgccgactgaggaaggagcaaagcccaaatctttatacggagtg
gagtttacctttgactcggatgcccgcgtggccatcactatctactgccaggcgtttgag
gaattctccaatggcatggcagtttataatcccaagagtcctgctatggtgtctgagacg
gtgcactacaagcgaggagtgagccagcagttctccttaccctccttcaagatcagtttt
tcggaatggaaggaggaagacctgaactttgacctggacagaggtatttttcccatggtc
atccaagcagtagtggacgaaggagacgattgtttgggacacgcacatgtgctgttggcc
gcctttgaacgacacgttgatggcagtttctcagtgaagcctctgaagcagaaacaaatt
gtggatcgggttagttacctgctccaggagatctacggcatcgaaaataagaacaaccag
gagacaaagccatctgatgacgagaacagtgacaacagtaacgagtgtgtggtgtgtctg
tcggacctgcgcgacacactcatcctgccctgtaggcacctgtgtctttgtaactcgtgt
gcagatacactgcgctaccaggccaacaactgccccatctgcagacttcctttccgtgcc
ctgctgcagatcagagcagtgaggaagaagcctggcgctctctctcctgtctctttcagc
cctgttcttgctcagagcatggaccatgacgagcactcgagctctgactcggttcctccc
ggctttgagcccatctcccttttggaggctcttaacggcctcactgccatgtcccctgct
gtgccatcagccccgctgtacgacgagatcaacttctcgggcagtctgagtggcgacagc
aggcagctgagttcccctgaacactctggagaaagcagccttcaaaagggaaaagtcagc
aagtcacctgacagcacactacgctcaccttcatcacccattcaggaggaggatgaggag
aagctgtcagagatttctgatgcacaggcccacactctgctgtccagcagtccagctccg
actgagtgcactggtccagaggatgctcctgactctctgtctccagaagacgaggacagg
gtgaattctgatggagagattctgcctgaatgcatcagcgagcgcagcagcctgaccaaa
gccgagagcgacacacccggttcctcgggctccatggagagtttgattactcggaccacg
agctgctccagccagcctcttctctgtcccatgagttctttgcacatggaggatgaataa
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