Tachysurus fulvidraco (yellow catfish): 113640509
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Entry
113640509 CDS
T08119
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113640509 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113640509 (grin2ab)
04082 Neuroactive ligand signaling
113640509 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113640509 (grin2ab)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113640509 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
113640509
NCBI-ProteinID:
XP_047658688
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All DBs
Position
18:908068..1006549
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AA seq
1465 aa
AA seq
DB search
MGFAVRLALMTWALLGWSRAAESAPSLSVAVILGETRGVSERALRPAPGVGAPLDISVLA
VQVNHTDPGSMLTHLCQLMGRQRLHGLVYGDGTDQEAIAQMLDFVSSQTAMPILGVHGGA
AMTMAEKDTSSSFFQFSASLHQEALLMLAVMEEYDWHVFSVVTTRFPGHQEFLATIRVTV
EHSFVRWDLQSVVTLDGVGEPEDKAHVQLKRIQSPVILLYCSKDEAELVLSEARSLGLIG
AGFVWIVPSLTSGNPARTPEAFPPGMISIAYDEWDYPLETRVRDAVGIFSHAAAAMFREQ
GRIPDGTVSCSGQAEKPEVPASALRRYMMGVNLEGRDLSFMDDGYQVNPKLVVIVLNTER
EWEKMGRWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCT
RNSVPCRKHMKDNSTGGSYLKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQSGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRHVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFCWEHLFYWRLRYCFTGL
CSGQPGLLFTISRGIWSCIHGVHIEMKKLPELGFSPQANMLHLLKSAKEITTLGVTSPKR
PISSILSPTPGLLELMSSNKGNNLAPKDAIYNNTNTMLSNRHKEPLNNTLLPGQCALSLA
DAQSGVVGSGGPGGGGGGGGGVGGGIGGGAVDSGVPASKSRALWKKSVETLRQTQGPNDN
SPPSPAAVFEPHATMKSQRYLPEDLPARSDMSDCSGRIDLPKQHKVKDTLRKRNRLPRDL
SDMELSALPSQASQQSNHSAHIYSQNSQSSQIYTIDSVDQEHGIHYPDIFNEHRDNKLCP
SSSSDQQPILQLNSNKFPQAHEPDVMQNATTAAKEKKYNTYGKPGGIGISPAVSNPAQDQ
RQTHCRSCLSKFSNYSGLYTMRSPQYRCDACLHSANLYDISEDQFLHPNIGAIRGGSVDR
SFCAFLPHPNASFTAYLPQSDQEGEGIISHYQNEGIYIHRQHSYENLPQKNSSRRVSLQD
STPHTNLHTSTMVPDKLPKSQSAQLSHTLASAGIGALGIGPRSKSMYPARPTENPFLQTL
RDDQRLAHGRSATDIYKQLVPLTLSPVIDSKGPGIGVVAPDLFYPEHVMPYVALSPVGTF
TAPRAMSAGGARRIYKRMPSIESDV
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgcagtacgcctggcactgatgacctgggctctgctgggctggtctcgggca
gctgagagcgcaccctctctgagcgtggcggtgatcctgggtgagacccgtggcgtcagt
gaacgggcattgcgcccagcaccaggcgttggagcaccgctggacatcagcgtgcttgct
gtgcaggtgaaccacacagacccaggaagcatgcttacccacctgtgccagctcatggga
cgccagcgattacatggccttgtgtacggtgacggaaccgaccaggaagctatcgcccag
atgctagactttgtctcttcccagactgctatgcctatcctgggtgtccatggaggtgca
gccatgaccatggctgagaaggacaccagctcctctttcttccagttcagtgcctcactc
catcaggaagcgctgctcatgctggctgtgatggaggagtacgactggcatgtcttctcc
gtggtgaccacccggttccctggtcaccaggagtttttggcgactattcgtgtgacagtg
gagcacagtttcgtgcgctgggatctccagagcgtagtgactctagacggcgttggcgag
cctgaggacaaagcacacgtgcagctcaagcgcatccagtcacctgtcatcctgctctac
tgctcaaaggatgaggccgaactggtgctgtccgaggcccggtcactcgggctgatcggt
gccggcttcgtgtggatcgtccccagtcttacgtccggcaaccctgcacgtacgcccgaa
gcctttcccccgggaatgatttccatcgcatacgacgagtgggactatcctttggaaacc
cgtgtgagggacgcggtgggaattttcagtcacgctgccgctgccatgttccgagagcaa
ggacgcatcccggacggaacggttagctgctcgggtcaagcggagaaaccggaggttcct
gcaagtgcattacgcaggtacatgatgggagtcaatctggagggcagagatctgtcattt
atggatgatggttatcaggtgaaccctaaactggtggtaatcgtactcaacaccgagagg
gaatgggaaaagatgggccgctgggagaaccattcattgatattgaaatttcctgtgtgg
cctcggtacaactcatttggagatgcagaagcagacgaaaatcacctgagcatcgtgaca
ttagaggaaaaaccatttgttatagtggacgatgtggacattctgacagggacgtgtacg
cgtaactctgtaccctgcaggaaacacatgaaggataactctacaggtggatcgtatcta
aagcagtgctgtaagggtttctgtatcgacatcctaaagaagattgccaggaacgtgaag
ttcacatacgacctttacctggtgactaacggcaaacacggcaagaaaatcaacaacgtg
tggaacggcatggtgggcgaggtggtttataagaaggccgtgatggctgttggttcgctg
accataaacgaggagaggtcagaggtcatcgatttctccgtgccctttgtagagacagga
atcagtgtcatggtttcccgtagcaacggaaccgtatcaccctccgcttttctcgagccg
ttcagcgcgtcagtgtgggtgatgatgttcgtcatgttgctcatcgtcaccgcaatcgcc
gtcttcctgtttgagttcatcagtccgctgggcttcaacagaaacctcgctcagggcaaa
gaccctcatggtccatcgttcaccatcggcaaggccgtctggcttctgtggggtcttgta
ttcaataactctgtaccagtacagaaccctcgaggcacgaccagtaagttcatcgtgtcc
gtgtgggccttctttgccgtgatcttcttggccagttacactgcaaacttggctgccttc
atgatccaggaggagtttgtggaccaggtcactgggctcagtgacagaaaattccagagt
ccgtattcattttcaccgccatttcgttttggtacggtcccaaatggcagcactgagagg
aacatcaggaagaactacccagacatgcaccagtacatggtcaaataccaccaatctggt
gtccaggacgcactggtcagcctcaagacgggcaaactggatgcgttcatctacgacgcg
gctgtgttgaactacatggcagggcgagatgacggctgtaagctggtgaccataggcagc
ggctacgtctttgccaccactggttatggtatcgccctccagaaaggatcctactggaag
cgacatgtagacctcgccattctaggaatcattggagatggtgagatggaggagctggag
gctcagtggctcacaggtatttgccataatgagaaaaatgaagtgatgagcagtcaactg
gatgtggacaacatggccggtgtcttctacatgctggcagctgccatggcgctctctctc
atcaccttctgttgggagcacctgttctactggcgactgcgttactgcttcacgggacta
tgctcgggacaacctggactcctctttaccataagcaggggtatctggagctgtatccac
ggtgttcacatcgagatgaagaagcttcctgagttaggtttcagtcctcaggccaacatg
ttgcacttgctgaaatcagctaaagagattaccactttaggggtaacctcacctaaacga
cccatctccagcatcctctctcctacacctggactattggaactcatgagtagtaacaaa
ggtaataacctggctccaaaagatgcaatctacaacaacaccaacaccatgctgtcaaat
cgccacaaagagcctttaaacaacaccctattgcctggtcagtgtgcccttagcctagct
gatgcccagtctggtgtggtaggtagcggaggcccaggaggaggtggtggtggtggtggt
ggtgttggtggtggtattggtggtggtgctgttgactcaggagtgcctgcttccaagtca
cgtgctctttggaagaaatctgtcgaaactctgcgacagactcaaggacctaacgacaat
tccccaccttcccctgcagcagtatttgagcctcatgcaactatgaaaagccagagatac
ttgcctgaagacttgcctgcacgctcagacatgtctgattgctctggccgtatcgaccta
ccaaaacagcacaaggttaaagatacactccggaagcgtaaccgcctgccacgggacctt
agtgacatggaactgtctgcattgcccagccaagccagccagcagagcaatcacagtgct
cacatctattcccagaacagtcagagcagccagatctacaccattgactcagtcgaccag
gagcatggaatacactacccagacatattcaatgaacacagagacaacaagctttgccct
tcatcttcttcagaccaacagccaattctgcagcttaacagtaacaagttccctcaggct
cacgaaccagatgtcatgcagaatgccacaactgctgctaaggaaaagaaatacaatact
tacggaaagcctggtgggatagggatcagtccagcagtgtccaatcctgcccaggaccag
agacaaacccattgccgtagttgtctgtccaagttctccaactattctgggctgtatacc
atgcgatcacctcagtatcgctgtgatgcctgtctgcactctgccaatctgtatgacatc
agtgaggatcagttcctgcaccctaacataggtgccattcgaggcggaagcgtagatagg
agcttctgtgcttttctgccacatcccaatgcttctttcacagcctaccttcctcagagt
gaccaagaaggagaagggatcattagtcactatcagaatgagggcatttatatccatcgc
cagcactcttatgagaatctgcctcaaaagaattcttcacgacgtgtgagccttcaggac
agcactcctcacactaacctgcacacgtccactatggtcccagataagcttccaaagagt
cagtcggcacaacttagccacacacttgcttccgcaggcattggcgcgcttggcattggc
cctcgcagcaaatcaatgtatccagctcgtccgacggagaaccccttcctgcagacgctc
cgtgatgaccagcgcctggctcacggccgcagcgccacggacatttacaaacagctagtg
ccacttacattaagtccagttatcgacagcaaggggcctggcataggggtggtggcacct
gacctattttaccccgagcatgtaatgccttatgtagccctttccccggtcggcacattc
acagccccaagagcaatgagtgccggcggtgcccgacgcatctacaaaaggatgcccagt
atcgagtctgacgtctga
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