KEGG   Tachysurus fulvidraco (yellow catfish): 113640521
Entry
113640521         CDS       T08119                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03008  Ribosome biogenesis in eukaryotes
tfd03013  Nucleocytoplasmic transport
tfd03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113640521 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    113640521 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113640521 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113640521 (xpo1b)
   03009 Ribosome biogenesis [BR:tfd03009]
    113640521 (xpo1b)
   03016 Transfer RNA biogenesis [BR:tfd03016]
    113640521 (xpo1b)
   03036 Chromosome and associated proteins [BR:tfd03036]
    113640521 (xpo1b)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     113640521 (xpo1b)
Ribosome biogenesis [BR:tfd03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    113640521 (xpo1b)
  Pre-60S particles
    113640521 (xpo1b)
Transfer RNA biogenesis [BR:tfd03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    113640521 (xpo1b)
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     113640521 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 113640521
NCBI-ProteinID: XP_026998822
LinkDB
Position
12:21023078..21046739
AA seq 1071 aa
MPAAMALLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAASV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITTEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISM
TLNPANPISNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcagctatggcactgttggccgaccacgcagccaggcagctgctggacttcaac
cagaaactggacattaatctcctggataatgtggttaactgcttgtaccatggagtggga
ccacagcaaagaatggcccaggaggtcctcactcatttaaaggagcacccggacgcctgg
accagagtggacactatcctggaattctcccaaaacatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaatcagtgtgaa
ggaattaaaaaatatgtcgtgggccttattatcaagacatcgtctgatgcagccagtgtg
gagaaggagaaggtgtatattggaaaacttaacatgattttagttcagatcctgaagcaa
gagtggcccaagcactggcccacctttatcagtgacattgtgggggccagccgcaccagt
gagagcctctgccagaacaacatgattatcctgaagctgctcagtgaggaggtgttcgat
ttctccagtggacagatgacccaggtcaaagctaaacatctgaaggacagtatgtgtaac
gagttctcgcaaatctttcagctttgccaatttgtgatggaaaattcacagaatgctcct
ttggtacacgccaccttagaaacgttgctccggtttttgaattggattccactgggctac
atctttgagaccaaacttatcagcactctagtgtacaagtttctgaatgttccaatgttt
cggaatgtgacactaaagtgtttgactgagattgctggtgtaagtgtgagccagtatgag
gagcagtttgtcactctgttcactctcaccatgatgcaactgaaacagatgctgcctcta
aacacaaatatccgtctggcgtacgcaaacgggaaggacgacgagcagaacttcatccag
aacctgagcctattcctctgcaccttcctcaaagagcatggccagctcatagagaaaaga
ctcaacctgcgggagaccctcatggaggctctgcactacatgctgctggtgtctgaagtg
gaggagaccgagatattcaagatctgtctggagtactggaatcacctggcagcagagttg
tacagagaaagtccattcagcacctccacctccccactgctctctggcagccagcacttt
gatgttccaccacgcagacaactctatctacctgtactctccaaggtgcggctgctaatg
gtgagccgcatggcaaaaccagaggaggtgctggtggtagaaaacgatcagggtgaggtg
gtgcgagagttcatgaaggacactgactccatcaacctatacaagaacatgagagaaacg
cttgtgtatctcacccatctggattatgcagatacagagaggatcatgacagaaaaactt
cataaccaggtgaacgggacggagtggtcctggaaaaacctgaacacactgtgctgggcc
atcggttccatcagcggagccatgcacgaggaggatgagaagcgattcctcgtcaccgtc
attaaggacttacttggattgtgcgagcagaagcgaggaaaggataacaaggccatcatt
gcttcaaacattatgtacattgtcggccagtacccgcgattcttgcgtgcacattggaag
ttcctcaagactgtagtcaacaaactgtttgagttcatgcatgagacccatgatggggtg
caagacatggcatgcgacacgttcattaaaattgcacagaagtgcaggagacattttgtg
caggtgcaggttggagaagtcatgcccttcattgatgagatccttaacaatatcaataca
atcatctgtgaccttcaaccacagcaggtgcatacgttttatgaggcagtgggttacatg
attggcgctcagacggaccaggctgtacaagagcatctgattgagaagtacatgctgcta
ccaaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggatatactgaag
gacccagagactgtcaaacagctgggaagcatcctgaagaccaatgtaagggcatgcaag
gctgtgggtcacccattcgtcattcagctgggacgcatctacctggatatgctcaacgtc
tacaagtgcctgagcgagaacatatctgcagctatccagactaacggtgagatggtgact
aaacagcctctaatcaggagcatgcgcacagtgaagagagaaactcttaaactcatctca
ggctgggtcagccgttccaacgacccacagatggtcggggagaactttgttccacctttg
ctggacgccgtcctgatagattaccaacggaacgttccggcagccagagagccggaagtg
ctcagcaccatggcaaccatcgtaaacaaactgggcggccacatcacaaccgagattccg
cagattttcgatgccgtctttgaatgcacgctgaacatgatcaacaaagatttcgaggag
tatcctgagcaccgcacacacttcttctacctgctgcaggcagtgaattcccactgcttc
ccagcgttccttgccattcccccagcacagtttaaactggtactggactccataatctgg
gcctttaaacacaccatgagaaacgtagctgacaccggtctgcagattctctacacgttg
ctgcagaacgtcgcccaggaggaggcagcagctcagagcttctaccagacatacttttgt
gacatactgcagcacatcttctccgtagttacagacacatcacacacggccggtctgacg
atgcacgcgtctatcctggcttacatgtttaatttggtggaggagggaaagatcagtatg
acactgaaccctgcaaaccccatcagcaatcaggctttcatccaagaatatgtggccaat
ttgctcaagactgctttccctcatctccaggatgcacaagtgaaggtgtttgtcacaggg
ctgttcagtctgaatcaggacatccctgcctttaaagagcacttgagagacttcctggtg
caaatcaaggagtttgcaggggaggacactacagatttgttccttgaggaacgtgaggca
tctctgcgccaggcccaggaagagaagcacaagctgcaaatgtctgtccctggaattctc
aaccctcatgagatccccgaggagatgtgtgactga

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