Tachysurus fulvidraco (yellow catfish): 113640521
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Entry
113640521 CDS
T08119
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03008
Ribosome biogenesis in eukaryotes
tfd03013
Nucleocytoplasmic transport
tfd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113640521 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
113640521 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113640521 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113640521 (xpo1b)
03009 Ribosome biogenesis [BR:
tfd03009
]
113640521 (xpo1b)
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113640521 (xpo1b)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113640521 (xpo1b)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113640521 (xpo1b)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113640521 (xpo1b)
Pre-60S particles
113640521 (xpo1b)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113640521 (xpo1b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113640521 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
113640521
NCBI-ProteinID:
XP_026998822
LinkDB
All DBs
Position
12:21023078..21046739
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAAMALLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAASV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITTEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISM
TLNPANPISNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagctatggcactgttggccgaccacgcagccaggcagctgctggacttcaac
cagaaactggacattaatctcctggataatgtggttaactgcttgtaccatggagtggga
ccacagcaaagaatggcccaggaggtcctcactcatttaaaggagcacccggacgcctgg
accagagtggacactatcctggaattctcccaaaacatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaatcagtgtgaa
ggaattaaaaaatatgtcgtgggccttattatcaagacatcgtctgatgcagccagtgtg
gagaaggagaaggtgtatattggaaaacttaacatgattttagttcagatcctgaagcaa
gagtggcccaagcactggcccacctttatcagtgacattgtgggggccagccgcaccagt
gagagcctctgccagaacaacatgattatcctgaagctgctcagtgaggaggtgttcgat
ttctccagtggacagatgacccaggtcaaagctaaacatctgaaggacagtatgtgtaac
gagttctcgcaaatctttcagctttgccaatttgtgatggaaaattcacagaatgctcct
ttggtacacgccaccttagaaacgttgctccggtttttgaattggattccactgggctac
atctttgagaccaaacttatcagcactctagtgtacaagtttctgaatgttccaatgttt
cggaatgtgacactaaagtgtttgactgagattgctggtgtaagtgtgagccagtatgag
gagcagtttgtcactctgttcactctcaccatgatgcaactgaaacagatgctgcctcta
aacacaaatatccgtctggcgtacgcaaacgggaaggacgacgagcagaacttcatccag
aacctgagcctattcctctgcaccttcctcaaagagcatggccagctcatagagaaaaga
ctcaacctgcgggagaccctcatggaggctctgcactacatgctgctggtgtctgaagtg
gaggagaccgagatattcaagatctgtctggagtactggaatcacctggcagcagagttg
tacagagaaagtccattcagcacctccacctccccactgctctctggcagccagcacttt
gatgttccaccacgcagacaactctatctacctgtactctccaaggtgcggctgctaatg
gtgagccgcatggcaaaaccagaggaggtgctggtggtagaaaacgatcagggtgaggtg
gtgcgagagttcatgaaggacactgactccatcaacctatacaagaacatgagagaaacg
cttgtgtatctcacccatctggattatgcagatacagagaggatcatgacagaaaaactt
cataaccaggtgaacgggacggagtggtcctggaaaaacctgaacacactgtgctgggcc
atcggttccatcagcggagccatgcacgaggaggatgagaagcgattcctcgtcaccgtc
attaaggacttacttggattgtgcgagcagaagcgaggaaaggataacaaggccatcatt
gcttcaaacattatgtacattgtcggccagtacccgcgattcttgcgtgcacattggaag
ttcctcaagactgtagtcaacaaactgtttgagttcatgcatgagacccatgatggggtg
caagacatggcatgcgacacgttcattaaaattgcacagaagtgcaggagacattttgtg
caggtgcaggttggagaagtcatgcccttcattgatgagatccttaacaatatcaataca
atcatctgtgaccttcaaccacagcaggtgcatacgttttatgaggcagtgggttacatg
attggcgctcagacggaccaggctgtacaagagcatctgattgagaagtacatgctgcta
ccaaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggatatactgaag
gacccagagactgtcaaacagctgggaagcatcctgaagaccaatgtaagggcatgcaag
gctgtgggtcacccattcgtcattcagctgggacgcatctacctggatatgctcaacgtc
tacaagtgcctgagcgagaacatatctgcagctatccagactaacggtgagatggtgact
aaacagcctctaatcaggagcatgcgcacagtgaagagagaaactcttaaactcatctca
ggctgggtcagccgttccaacgacccacagatggtcggggagaactttgttccacctttg
ctggacgccgtcctgatagattaccaacggaacgttccggcagccagagagccggaagtg
ctcagcaccatggcaaccatcgtaaacaaactgggcggccacatcacaaccgagattccg
cagattttcgatgccgtctttgaatgcacgctgaacatgatcaacaaagatttcgaggag
tatcctgagcaccgcacacacttcttctacctgctgcaggcagtgaattcccactgcttc
ccagcgttccttgccattcccccagcacagtttaaactggtactggactccataatctgg
gcctttaaacacaccatgagaaacgtagctgacaccggtctgcagattctctacacgttg
ctgcagaacgtcgcccaggaggaggcagcagctcagagcttctaccagacatacttttgt
gacatactgcagcacatcttctccgtagttacagacacatcacacacggccggtctgacg
atgcacgcgtctatcctggcttacatgtttaatttggtggaggagggaaagatcagtatg
acactgaaccctgcaaaccccatcagcaatcaggctttcatccaagaatatgtggccaat
ttgctcaagactgctttccctcatctccaggatgcacaagtgaaggtgtttgtcacaggg
ctgttcagtctgaatcaggacatccctgcctttaaagagcacttgagagacttcctggtg
caaatcaaggagtttgcaggggaggacactacagatttgttccttgaggaacgtgaggca
tctctgcgccaggcccaggaagagaagcacaagctgcaaatgtctgtccctggaattctc
aaccctcatgagatccccgaggagatgtgtgactga
DBGET
integrated database retrieval system