Tachysurus fulvidraco (yellow catfish): 113640716
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Entry
113640716 CDS
T08119
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
tfd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113640716 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113640716 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113640716 (her6)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113640716 (her6)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
113640716 (her6)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
113640716 (her6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
113640716
NCBI-ProteinID:
XP_026999126
LinkDB
All DBs
Position
5:4336385..4338057
Genome browser
AA seq
271 aa
AA seq
DB search
MPADMMEKNSSSPVAATPASMNTVPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLANCMTQLNAMNYTAQAHAGPAPPPPPTFGQPVVQIPG
ATHVPVPVSVPGCKSAPPSGASPSDAAKVYGGFQLVPATDGQFAFLIPSGAFTPGGPVIP
VYASGAATPLPAAAASPREASLTSDSVWRPW
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatatgatggaaaagaactcgtcttccccggtggctgcgaccccggcgagc
atgaacaccgtcccggacaaacccaagacagcctcggagcacagaaagtcatcgaaacct
attatggagaaaagaagacgagccaggatcaacgaaagcttgggtcaactcaaaacgctc
atcctggacgctctgaaaaaagacagctccagacactccaagctggagaaggctgatatc
ctggagatgaccgtgaagcacctcaggaacatgcagcgcgcgcagatgaccgctgctctg
aacgcggaccccaccgtgctcggcaagtaccgcgcgggctttagcgagtgcatgaacgag
gtgacgcgttttctgtccacgtgcgagggcgtaaacgccgaggtgcgcacgcgactgctc
ggccacctcgctaactgcatgacccagctgaacgcaatgaattacacggcgcaggcgcac
gccggacccgcgccgcctcctcctccgaccttcggccagcccgtggtgcagatccctgga
gcgacgcacgtccccgtgccagtatcggtgccggggtgtaaaagcgcgcctccatccggc
gcgtcgccgtccgacgctgccaaggtgtacggcggcttccagctcgtcccggccacagac
ggacagtttgcctttttgattcccagcggcgcgttcacacccggcggccccgtgatcccg
gtgtacgcgagcggtgcagccacgcccctcccagcagccgcagcgtccccgcgcgaggcg
tcgctcacttcagactccgtctggaggccttggtag
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