Tachysurus fulvidraco (yellow catfish): 113640721
Help
Entry
113640721 CDS
T08119
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113640721
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113640721
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113640721
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113640721
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Protocadherins
113640721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
DUF6377
MAP17
Motif
Other DBs
NCBI-GeneID:
113640721
NCBI-ProteinID:
XP_026999131
LinkDB
All DBs
Position
5:6738502..6986977
Genome browser
AA seq
1228 aa
AA seq
DB search
MDLKDFYLLATFVACLWLDPAIAQELIYSIREELQENVLIGNIPKDLNISHMNTASNNLV
YRLVSKAGDNPLLRVISNTGEIFTTSNRIDREKLCPGPSFEDTECSFEIEVVILPNDYFR
LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELVNG
QSTFGLDIVETQEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGNPQKSSTAILQVTVTD
VNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGSNAEIKYMFGTQVSPSTRRLFA
LNATTGLITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNAPNIDLRYII
SPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLLETS
ALLDYEGTKEYIFKIVASDSGKPSLNQTALVKVKLEDENDNPPIFSQPVIELSVMENNQR
DLFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTA
RDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGEN
AEVSLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAVDGGRPPCSSVAKVTIN
VIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIISGNGRG
LFRIDPVTGNITLEEKPMIADIGLHRLVVNISDLGYPKSLHTLVLVFLYINDTVGNSSFI
YDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGTMVVIVVIFITVLVRCRHVSQF
KAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVSIEENKPDDPAHEPINGTI
SIPAELEEPGIGRFDWNTTPTTTFKPNSPDLARHYKSASPQSAFHVKADTPVSVKKHHVV
QELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGGTLHNRQRFTFILRLFWK
HDKGTLTRARTELNPDYLDLRSRTDLNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLG
EPESVGGGALLSKPLPLAQEEFYEQDKRTEADGNSDPNSDGLLGPRGLMEATEMCTQECL
VLGHSDNCWMPPKSPAQSYGGSQNEWTKDKLLNGHTLNRGWKSSHEHFGDRKSFAVGGVS
SHMTDIPLASLKSYQASSGSENPKEQQL
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaggatttttacttattggcaacctttgttgcttgcctgtggctggatcca
gccatcgcccaagagctaatttactcaatccgtgaggagctgcaagagaacgtacttatt
ggaaatataccaaaggatttgaacatctcccatatgaacactgccagcaacaatctggtt
taccgtctggtctcgaaagccggggacaacccattactgagagtaataagcaacacggga
gagatttttaccacttcgaaccgtattgaccgcgaaaaactctgtcctggtccatcgttc
gaggatacagagtgctcatttgaaattgaagtggtcatcctgccaaacgactacttcaga
ttaatcaaaatcaagatcatcgtgaaggacaccaatgacaatgctccgatgtttccttcc
cctgtgattaacatttccattcctgaaaacactctcatcaacagccgctttgccattccc
tctgctactgatcccgacacgggacccaacagcgtccacaaatatgaactcgtgaacgga
cagagtacttttggcttggatattgttgagacacaggaaggagagaagtggccacagctg
attgtccaacaaaatctggaccgggagcaaaaagacacctatgttatgaaaatcaaagtg
gaggatggtgggaatccacagaagtccagcactgctattcttcaggtgacggtaactgat
gtcaatgacaatcgtccggttttcaaagaaagtcagatagaggttcacattcctgaaagc
tctccagttgggacttctgttgtacagctgcaggctacggatgcagacgtcgggtccaat
gcagaaatcaaatatatgtttggtacccaagtatctccatccacacggagactctttgcg
ctaaacgctacgactggacttataacagtgcagaggccactcgatagggaagagactgca
attcataagctgtcagttttagcaagtgatggaagctccagtccagcaagagcaactgta
acgatcaatgtgactgatgtgaatgataatgctccgaatatagacctgagatacattatc
agtccgactaacggcactgtaatgctgtctgaaaaagaccccattaacactaaaatagct
cttatcaccgtctccgataaggacacggatgtcaacggcaaggtgatctgctttattgaa
aaggacgtgccatttcacctcaaagcagtctacgacaaccaatatttattggaaacctca
gcattgttggattatgaagggaccaaggagtacatcttcaaaattgtggcttcggactct
ggtaagcctagcctgaatcagaccgcattggtcaaagtaaagctagaggatgagaatgac
aatccgcccatttttagccagcctgtaatcgaactgtcagtcatggaaaataaccagcgt
gaccttttcctcaccaccattagtgctacagatgaagacagcgggaggaatgcagaaatt
gtctaccagcttggacccaacgcgtctttcttcgatttggaccgcaaaaccggggtgctg
acggcctcaagggtgtttgacagagaagatcaagataggtttctcttcacagtcacagca
agagataatggcacccgggctttgcagagccaggcggctgtgatagttacaattttagac
gaaaatgacaacagccccaagttcacacacaatcactttcagttctttgtgtctgagaac
ctgccaaagtacagtactgtaggggtgattacagtcacggatgcagatgcaggtgaaaac
gcagaggtgtctctctccatactcaacgataacgagaactttatcctcgatcccttctcc
ggagttatcaaatcaaatgtttcctttgaccgagagcagcaaagttcttataccttcgat
gtgagggctgttgacggtggtcgtcctccgtgttcatcggttgccaaggtgaccatcaat
gtcatcgatgtcaatgacaacccacctattgtcatctaccctccatcaaacacttccttc
aagctggtaccactttctgccattccgggatctgtagtcgctgaggtttttgctgtggat
ggagatacaggaatgaacgctgaattaaaatacaccatcattagtggtaatggcagagga
cttttcaggattgatcctgttacgggaaacattactttagaagagaaacccatgattgca
gatattggcctccatcgtctggtggtcaacattagtgaccttggctatccaaagtctctg
cacacactagttcttgttttcctttatatcaatgacacagtcgggaattcatcttttatc
tacgacctcatccggcgcacgatggagacgccgttggataggaacatcggtgaaagtagc
gaaacctatcagaacgttgacaatcttaaaaccatcattgccatcgtcacaggcacaatg
gtggtcatcgtggtgatcttcatcaccgttctggtccgctgccgtcacgtttcgcagttt
aaagctgctcagaggaagaaacaaggtgctgaatggatgtcacccaatcaggaaaacaag
cagaacaaaaagaaaaagcgcaagaaaaggaagtcacccaaaagctccctgcttaacttc
gtaagcattgaggagaacaaacctgacgatccagcgcacgaacccatcaacggcaccatc
agcatcccagctgagcttgaggagcccgggattggacgttttgactggaacacaacacca
accaccactttcaagcccaatagccctgatttagccaggcactacaagtctgcctcgccc
cagtcggctttccacgtcaaggccgacactccagtttcggtgaaaaagcatcacgtcgtt
caggagctgccgctggacaacactttcgtcggcggatgtgacactctttccaaacggtca
tccactagctctgatcacttcagtgcctcggagtgcagctcccaaggaggcttcaagaca
aaaggggggaccttacacaacagacagagattcacgtttattctgagacttttctggaaa
catgataaagggactctaacacgtgctcggactgaactgaaccctgattatctggacctg
cgctctagaactgacctgaaccctgaatactggaccccgtgtacaccattgtctcagcgc
cgtgtgacctttcaccttcccgacggctctcaggagagctgcagcgacagcggtttgggt
gagcccgagtctgtcgggggaggggctttgctttctaagcccctccctctggcacaggag
gagttttatgagcaagacaaacgaaccgaagcagatggcaactctgatccaaactcggat
ggacttttagggcctaggggtctcatggaagcaacagagatgtgtacgcaggagtgtcta
gtgctcggccactcggataactgctggatgccgcccaaatcacccgctcagtcctacgga
ggcagccagaacgagtggacgaaagacaaactgctgaacggtcacacactaaaccgcggc
tggaagagcagccacgagcacttcggagacaggaaatctttcgccgtaggaggagtcagc
agtcacatgaccgatatcccgttggccagtttaaaatcctatcaggcctcatctggctcc
gaaaacccaaaggagcagcagctttaa
DBGET
integrated database retrieval system
