Tachysurus fulvidraco (yellow catfish): 113640732
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Entry
113640732 CDS
T08119
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04814
Motor proteins
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113640732 (dync1i2b)
09142 Cell motility
04814 Motor proteins
113640732 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113640732 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113640732 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113640732 (dync1i2b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
113640732 (dync1i2b)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
113640732 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_RFWD3
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
113640732
NCBI-ProteinID:
XP_026999159
LinkDB
All DBs
Position
5:5205069..5214599
Genome browser
AA seq
647 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETEGRGEGASPPNDDSDLERKRREA
EALLQSMGITDPAMVQPLRIVTEDTCLFHYLVPPPMSPSAKSVGTPSETGSQDSVDGAAG
TRTLHWDSDPSTLLLHSDSQHGRGPLRLGMAKLTQVDFPPRELVSYSKETQTPVTTQPKD
AEEENEEEDLAAAPAALETPQINEPHNEEEEAPPHELTEEEKQQILHSNDFLTFFDQSSR
IVERALSEQVDVCFDYSGRDLQDKEGETQAGTKLSLNRQFTDERWSKHRVVTCLDWSPQY
PELLMASYSSNEEAPHEPDGVVLVWNMKYKKTTAEYVFHCQSAVMSAAFAQFHPNLVVGG
TYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVIGTQNAHNLISISTDGKMCSWS
LDMLSTPQDSLELVFKQSKPVAVTSMAFPLGDVNNFVVGSEDGTVYTACRHGSKAGISEM
FEGHHGPVTGLDCHTATGPVDFSHLFVTSSFDWTVKLWSTRNTKPLYSFEDNSDYVYDVM
WSPAHPALFACVDGVGHLDLWNLNNETEVPSASVTVEGNPALNRVRWANSGREVAVGDSE
GRVHIYDVGEQIAVPRQDEWTSFLKTLSELGENQEEEEDLANQRLAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgagctaaaggcagagctggaaaggaagaaacagcgtcttgctcag
atcagagaggagaagaagagaaaagaggaagagcgcaagaaaaaagaaactgaaggacgc
ggcgaaggcgcctctccgcccaatgatgactctgacctggagaggaagaggagggaggcc
gaggctctgttgcagagcatgggcatcaccgatcctgccatggttcagcctctgcgaata
gtaacagaggatacgtgtctgtttcattatttagtcccccctcccatgtctccctctgcc
aaatcagtgggcactccgagtgaaaccggcagccaggactcagtggacggagccgctgga
accaggactctgcactgggattctgacccctctacccttctgctgcattcagactctcag
catggacgaggtcccctcaggctcggcatggctaaattgactcaggtggattttcctcct
cgtgagctcgtgtcgtactctaaagagactcagactcccgtcaccactcagcctaaagat
gcggaagaggaaaacgaggaggaggatctggcagcggcgccggctgctctcgagactccg
cagataaacgagcctcacaatgaggaagaggaggcgccgcctcatgagctgacggaggag
gagaaacagcagatcctgcactcaaatgacttcctgacgttttttgatcagagctcacgc
atcgtggagcgcgctctttccgagcaggtggacgtctgctttgactacagcggacgagac
cttcaggacaaagagggagagacccaggctggcaccaagctgtcactgaacagacagttt
acagatgagcgctggtccaaacacagagtggtcacctgtctggactggtcacctcagtac
ccagagttattgatggcttcctacagcagtaatgaagaagctcctcatgagccagatggt
gtggtgttggtgtggaacatgaagtacaagaaaacaacagcggagtatgtcttccactgt
cagtcggcggtgatgtccgcagcttttgcgcagtttcatccgaacctggttgtgggaggg
acgtactctggacagatcgtcctgtgggacaatcgcagtaacaagcggaccccagtacag
aggacacctctctctgcctctgcacacacgcacccggtgtactgtgtcaatgtcattggg
actcagaatgctcacaacctcatcagcatctctactgatggcaaaatgtgctcctggagc
ctagacatgctttccacgcctcaggacagtctggagctggtgtttaagcagtctaaacct
gtggcggtgacatctatggcatttcctctgggtgacgttaataactttgtggtgggcagt
gaggatggcacggtctatactgcctgcagacacggcagcaaagcagggataagcgagatg
ttcgagggtcatcatggcccagttacagggcttgactgccacacagccaccggacctgtt
gatttctctcacctgtttgtgacttcttctttcgactggaccgtcaagctgtggagcacc
aggaacactaagcctctgtactcattcgaggataactctgactacgtgtatgacgtcatg
tggtctcctgctcaccctgcactgtttgcctgcgtcgacggagtcggacaccttgacttg
tggaacctcaacaacgagaccgaggttccctcagcttcagtgacagtagaggggaaccct
gccctaaaccgcgtacgctgggccaattctggcagagaggttgccgtcggtgattctgag
ggtcgtgtacacatctacgacgtaggagagcagatcgccgtgccgcggcaggacgaatgg
accagcttccttaaaacactcagcgaactcggagagaaccaggaggaggaagaggatctg
gcaaaccagcgccttgctgcctga
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