Tachysurus fulvidraco (yellow catfish): 113640734
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Entry
113640734 CDS
T08119
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00250
Alanine, aspartate and glutamate metabolism
tfd00410
beta-Alanine metabolism
tfd00430
Taurine and hypotaurine metabolism
tfd00650
Butanoate metabolism
tfd01100
Metabolic pathways
Module
tfd_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
113640734 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
113640734 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
113640734 (gad1b)
00430 Taurine and hypotaurine metabolism
113640734 (gad1b)
Enzymes [BR:
tfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
113640734 (gad1b)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
113640734
NCBI-ProteinID:
XP_026999161
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Position
5:5122905..5159545
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AA seq
594 aa
AA seq
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MMMAASASSSSSSSAAEVDQSADNLRPPASVCDGWYGVAHGCTRKLGMKICGFLQKNNSL
EEKSRMVGSFREKEQSHNRENREKESRFTHTETDFSNLFARDLLPAKNGEEPTMQFLLEV
MEILTNYVRKTFDRSTKVLDFHHPHQLLEGIEGFNLELCDQPESLEQILVDCRDTLKYGV
RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWP
NGEGDGLFSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLILFTSEHSHYSIAKAGAA
LGFGKENVILLSTDERGRVIPADLEAKIINAKQKGYVPLFVNATAGTTVYGAFDPINDIA
DICEKYNIWLHVDGAWGGSLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAILVRE
KGILQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEQHV
DRCLEVSEYLYNKIKNREGYQMVFQGEPQHTNVCFWYIPLSMRNMLDGEERRERLHKVAP
KIKAMMMECGTTMVGYQPQGDKVNFFRMVISNHAATKSDIDFLIEEIERLGQDL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggcttcggcttcatcctcctcctcttcctcagccgccgaagtggatcag
agcgcagataatctacgacctccagcttcggtgtgtgatggctggtacggagttgcacat
ggctgcacccgcaaactgggcatgaagatctgcgggtttctgcagaagaacaacagcttg
gaggagaaaagcaggatggtgggatccttcagagagaaagagcagagccacaacagggag
aaccgggagaaggaatcgcgattcactcacactgagactgacttctccaacctgttcgct
cgggatttacttcctgctaagaatggtgaagagccgacgatgcagtttctcctcgaggtc
atggagattctcacgaattacgttcgcaaaactttcgacagatccactaaagttctggac
ttccaccatccacaccagctcctggagggcatcgagggtttcaacctggagctctgtgac
cagcccgagtcactcgagcagatccttgtggactgcagggacacactcaagtacggggtt
cgcacaggtcacccgagatttttcaatcagctctccacaggtctggacatcatcggcctg
gcaggagaatggttaacctctactgctaacaccaacatgttcacctacgagattgcgcct
gtgtttgtgctgatggagcagctgacgctgaagaagatgagggagattatcggctggccg
aacggagaaggagacggacttttctcgccgggtggtgccatatcgaacatgtacagtgtg
atgatcgcccgctataagtatttccccgaggtcaaaaccaaaggcatgtcggctgcaccg
cgtctcattctgtttacatcagaacacagtcactattcgattgccaaagctggagctgct
ctgggtttcggtaaagaaaacgtcatcctgctcagcaccgacgaaaggggtcgagtcata
cctgcagacctggaggctaaaatcatcaacgccaaacagaagggttatgttccactcttt
gtgaacgcaacagccggtactacagtgtacggagcgttcgaccccatcaacgacatcgca
gacatctgtgagaaatacaacatttggcttcatgtagatggagcgtggggtggcagtctg
ctgatgtcgaggaagcatcggcataagctcaatggcgtagagagagcaaactcagtcaca
tggaacccacacaagatgatgggagtgccactgcagtgctcagccatcctggtcagagag
aagggaattctgcagggctgtaactccatgtgcgctggttacttgttccagcctgataaa
cagtacgatgtgacgtatgatacgggagataaagccattcagtgtggcagacacgtggac
atcttcaaattctggctcatgtggaaggccaagggcacagtggggtttgagcagcatgtg
gaccgctgtctggaggtctctgagtatctctacaacaaaatcaagaatcgtgagggttac
cagatggtcttccaaggagagccccagcacactaacgtgtgtttctggtacattccactg
agtatgaggaacatgctggatggagaggaaagaagggaacgactgcacaaggtggcgcct
aagatcaaagcgatgatgatggagtgcggcaccaccatggtgggctaccagccacagggg
gataaagtcaactttttccgcatggtcatctccaatcacgctgccaccaagtcagacatc
gatttcctcatcgaggagatcgagagactcgggcaagacctgtga
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