Tachysurus fulvidraco (yellow catfish): 113640995
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Entry
113640995 CDS
T08119
Symbol
trim13
Name
(RefSeq) tripartite motif-containing 13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113640995 (trim13)
04121 Ubiquitin system [BR:
tfd04121
]
113640995 (trim13)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113640995 (trim13)
Membrane trafficking [BR:
tfd04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
113640995 (trim13)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113640995 (trim13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
U-box
RING_XB3-XBAT31
MitMem_reg
SOAR
Motif
Other DBs
NCBI-GeneID:
113640995
NCBI-ProteinID:
XP_026999367
LinkDB
All DBs
Position
6:complement(24406217..24409500)
Genome browser
AA seq
404 aa
AA seq
DB search
MDLLEEDLTCPICCCLFEDPRVLPCSHSFCRKCLEGILEDNRSPVWRPAFKCPTCRKETA
HNGISSLQVNYSLRSIVEKYNKIRASPRMSQCRAHSGQPLNIFCATDLKLICGFCATTGE
HKGHKFCALEEAYEREKVAFDDLLRAVESWKGAEVLSCLEALEGAKKKALQMASRDLDRV
AEYFDKLLRALEHKRSEILSDFESLKLSVMQTFDPEINHLRSALEEQQRALRLAESFRSL
SDPLTFLQCMQDFREKVRAIRETPLPARTDVDVGALVPSFDVHEWDRVRLGDVDALRAPH
DGGALRSPTARIGPPRLSRFVWSCAVLVCVCLCVLNFLPVDCFAASLCTKAVSALAAVSV
PAPAEMLRWISLCWQEVAGVCALITELCRNCITELIDTTSEFIS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctggaggaggacctgacatgcccgatatgctgttgtctttttgaagaccca
cgtgtgctgccgtgttcacatagtttctgcaggaagtgtttggaaggcatcctggaggat
aaccgaagtccagtttggagacctgcgttcaaatgcccgacgtgccgaaaggagaccgcg
cacaacggcatctcgagcctgcaagttaactattccctgcgcagcatcgtggagaagtac
aacaaaatccgtgcgagcccaagaatgtctcagtgtcgcgctcacagtggacaacccctg
aacattttctgtgccaccgacctgaagctcatctgcggcttttgcgccactacaggagag
cacaaagggcacaagttctgcgcgctagaggaggcgtatgagcgagaaaaggtcgccttc
gatgatttgcttcgtgccgttgagagttggaaaggcgctgaagttctctcctgtctggaa
gctctcgagggggcgaagaaaaaagccctgcagatggcctcgagagacttggatagggtc
gcggaatatttcgacaagctgctccgtgcccttgaacacaagcgcagcgaaatcctgtcg
gactttgaaagcctaaagttgtcggtcatgcaaacattcgacccggagatcaaccacctc
cgctcggcgctcgaggaacagcagcgggcgctgcgcctcgccgagtcgtttcgctccctc
tccgacccgcttaccttcttgcagtgtatgcaggacttccgcgagaaagtgcgagctatt
cgcgagacgccgctgcccgcgcgcacggacgtggacgttggcgcgctcgtaccaagcttc
gacgtgcacgagtgggaccgtgtgcgtctaggagacgtggacgcgctgcgcgctccgcat
gatgggggggctctccgttcgccgacggctcgcattggccccccgcgtctctcccgattc
gtgtggagttgcgccgtcctggtgtgcgtgtgcctgtgcgtgctgaactttctccccgtt
gactgtttcgccgcgagtctctgcactaaagcggtgtccgctcttgccgctgtctctgtg
cccgcgcctgcagaaatgctgcggtggatctcgctttgctggcaggaggtggcgggagtg
tgcgcgctcattacagagctctgcaggaactgcattactgagctcatcgacaccacgtca
gagtttatcagctga
DBGET
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