Tachysurus fulvidraco (yellow catfish): 113641011
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Entry
113641011 CDS
T08119
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113641011
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
113641011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
113641011
NCBI-ProteinID:
XP_026999390
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All DBs
Position
26:4492602..4589426
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AA seq
2102 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNIFSLAELTGIKWRWYNFRGGGEYGPVISAPAQDDPVLCSF
TRCVQANLLCVWRRRLKPDAKELWIFWWGDEPNLSDIIHHELEVVEEGQWECGLSYECRT
LLFKAVHNLLERCLMDKDFVRIGKWFVKPYELEEKHLGASSSEHLSCSFSFFLHGESNVC
TSVEISQHQPVYHITEEHVRLAQTSSSPIQVILSPYGLGGTLTGQVFKMSDPAVRKLIEE
WSYFYPMVLKHSMREQNSDLSYDPHSHVALEVIVGGVRMIYPAAFVLIAQADLPVEQPPS
AQGAQSGTRDSSNCGIPLTPPTSPEQPCSGDSGFQTAVSSVSSQESGATHSPKHLEKKLS
NQMVHQAWKECYMNQLQRKCNLSNGMVPKKDVTSEVAVWDFTDPVERAPCSCNRSRQQPK
QQPQANGFSANSQPSTNPSSSSSSSSLSSSLPPPSTPKSKTADKADKSDKVPKRAAITPF
HHRLSVDQQPCPEQDAPPGPQLVLAALDTSLENLPGCKYPKPMFTGRKGPESLLHSPVSP
LPPTLSPHPRVQDPEVMEAPMDVSQCLEGSSMPTAPEMSDTALYAASLVRREASGGWWKS
YRTPVIDIVEYKPPELPYDMVEIKAEGEGTALKSFFAQTHKRFKISEERLQEHISTLGFM
QQPGVEALGEAGEDPYDFKEGDIEYSFPTTKRLKSRDPNRKSKGEEVNGNSTVPEGKDAM
SIFSSAPKFAEELAQDESGGKANPPLTREKDLIVLISDLENIFGEEEDDLGTTFPNHQQQ
SKTVVPGTEERPLGIDGRVAVPYPSTVAELQRMFPTPPSLEQHPAFSPITTYRDTPSQET
PAPSVGHEHLHNTHTNSHFSDFRSDMDESVTSPKAEDIRSQVGCSMFAPLRTLPSQCLPP
LKIPEQCYYRPSWSLLPKMEPYCLPSQAPFVPHGYVNVPSIGTLQDPDYAQMSTGTASVG
TAGGVLPSPATPRFSVPTPRTPRTPRGVGTASGQGSIKQDGTELSSPISTPSTGLPLSSV
EPLASGPVLPEAHSLYVILLLSDSVLDVFKDRSFDSCCICACNMNVKGADVGIYIPDSTR
EDQYRCMCGFSAIANRRLAHGAGLFLEDELDIFGRGSEAGRAAERRLALGRRDTPTGGRR
AQEQTPIKVLELIQEQCSQPILSVASLHSPAACSCRSRQRALLQSWVADRLWADSSDACV
ECYNALVQGLQYVDNAAGGKVEQALVRSSALHSWPHTNVLDISMLSSQDVVRMLLSLQPF
LQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPTLLLGYDRDF
MALSPLALPFWEKLLLEPYGGQRDVAFLVLCPNNEILLAGARTFFQELSAVYESCRLGKH
HPLARMTRDGIVPVGTMESAKPEENGGEVDEWMTGPWAGQYREDHLRKLKLYAQTCKQKL
APQLSTLSLDSNLLLPPKPQSSSAPAPSNQLNPSTGAPEGETSTAATTAAAPTAPTAGAP
ANTPTPTSTSTGQASTEGTDTQSVPNTTPNQQSHPTENAESLAERERIGIPTAAQSADSH
AYPPAIVLYLVDPFLCSGSGVGSGEEEEAEEVQSRSMWLLALLRCYTDMLSSLPENIQSA
LVLQVVPCQYLLQPASGESPLYLQHLRSLAFSAHSQCRRRLPTQTHIKSLTGFGPAATIS
TLFKSVENPSSMQVYSPPFVLAPLRTKQPDVGEEASTRYNVLFVGYCLSHDQRWILVSCT
DQQGELLETCIINIDVPNRSRRPKFSPRKIGLQKLWEWCIGIIQMTAIPWRIVIGRLGRL
GHGELKDWSLLLGEHSLHSISRQLREACRMCGISAADSPSILSACLVSMEPQGSFVVMPD
AVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSSTTAPSSYPTEDNTDDIFGLPF
TDDLEKDIEHDMMLITGNLHASPNTSPVPSPGSPCGLGVGSHFPHTRSQGERLLSREAPE
ELKQQPLALGYYVSTAQAEGLPHWFWASCPQAQNQCPLFLKASLHHHISIAQTDELVSSK
TSQRNPHPLDSKTTSDVLRFVLEQYNALSWLTCSPATQDRRSCLPVHLVILTQMYNAILN
IL
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcggcgaattgggtggcgaacggggcaagcctcgaagactgccattccaac
attttctctctggcggagttgacgggcatcaaatggcgctggtacaacttccgtggcggc
ggcgaatacggacccgtgatctcggctccggcacaggacgacccggtgctgtgcagcttt
acacgctgcgtgcaagccaacctgctgtgtgtttggcgacgtagactcaaacctgacgcc
aaggagctctggatcttctggtggggcgacgaacccaacttgagtgacatcatacaccac
gagctcgaagtggtagaagaaggacaatgggaatgtgggctttcctatgagtgcaggaca
cttctcttcaaggctgttcacaacctactggaacggtgcctcatggacaaggactttgtg
cgcatcgggaagtggtttgtcaagccttacgagctcgaagagaagcacctgggcgccagc
agcagtgagcacctctcgtgctctttctccttcttcctgcatggtgagagtaacgtgtgc
accagcgtggagatctcgcagcaccagcctgtctaccacatcactgaggagcatgtacgc
ctggcccagacctccagcagtcccattcaggtgatactgagtccgtacggtttgggcggc
actctgactggtcaggtgtttaagatgagcgatccggcggtacggaagctgatagaagag
tggagctacttctaccccatggtgctgaaacatagcatgcgcgagcagaacagcgatctc
agctacgacccccacagccatgtcgctctggaggtcatcgtgggtggtgtgaggatgatc
tacccagcagcctttgtgctcattgcccaagctgatctgcctgtagaacagcctccttct
gcccaaggagcacaaagtggcactagagactcatcaaactgcggcattccgctcacccca
cctacatccccagagcagccctgctccggtgacagcggatttcagaccgcagtctctagc
gtgagcagtcaagagagcggagccactcacagccccaagcatttggagaaaaagctgagt
aatcagatggtccatcaagcatggaaggaatgctacatgaaccaattacagcgcaaatgc
aatctgtcgaacggcatggtgccaaagaaggacgtaacaagcgaggtggcagtttgggac
tttactgaccccgtggagcgagccccatgcagctgtaacaggtcaaggcagcagccgaag
cagcagccacaagcaaatggcttctctgccaattcccagcccagtaccaacccatcttcc
tcttccagctcttcctccttatcctcctctttacccccaccttcgacacctaaaagcaag
actgccgacaaagcagacaagtctgacaaggttcccaaacgggcagccataacccctttc
caccaccgcctctctgtagaccagcagccatgcccggagcaggacgcacctcctggacct
cagctggtactcgcggccttggacacttctttagagaacttgcctggctgcaaataccct
aagcctatgttcactggcagaaaagggcctgaatctctcctccattctccagtatcacca
ctaccacctacactaagtccacatcctagggtgcaggaccctgaggttatggaggcaccc
atggatgtttcccaatgcctagagggcagttccatgcctaccgccccagaaatgagtgac
accgctctgtatgcagcctctctagtacgcagagaagccagtggaggctggtggaagagt
tacaggactcccgtgatagacatagtagagtacaagccaccagaattgccatatgatatg
gtggagatcaaagctgagggtgaaggaactgccttgaagagtttttttgcacagacgcac
aagaggtttaagatctcagaagagaggcttcaggagcacataagcactctgggattcatg
cagcagccaggagttgaagcgcttggggaagctggtgaagatccttatgacttcaaggaa
ggggacatcgagtacagctttcccaccaccaaaaggctaaagagccgcgatcccaatcgg
aaatcaaagggagaggaggtcaatggcaacagcacggtccctgaagggaaagatgccatg
tccattttcagctccgctcctaaatttgcagaggaattggctcaggacgagtctggggga
aaggccaacccgcctctgaccagagagaaagatctgatagtgctcatatcagacttggaa
aacatctttggagaggaggaagatgatcttgggaccacttttcctaatcatcagcagcaa
tccaagactgtggtgccaggaactgaagagcgccccctggggattgatgggagagtagca
gtaccatatccctcaacagtagcagagcttcagcggatgttccccactcctccctctctg
gagcaacacccagcattctccccaattacaacctaccgagacacccccagccaagaaacc
ccagcaccctcagtgggacatgagcatctccacaacacccacaccaacagccattttagt
gactttaggtctgacatggatgagagtgtgacaagccccaaagcagaggatatacggtcg
caagtgggatgttccatgtttgctcccctccggacattacccagccagtgtcttccccca
ctgaagatccctgagcagtgctactacagaccctcgtggtccttgcttcctaagatggag
ccctactgcctcccgagccaggctccttttgtaccacatggatatgttaatgttccaagc
atcggcactctgcaggacccagactatgcccagatgagcactggtaccgcgtctgttggc
acagcaggtggagtcctgccttcacctgcaacaccccgtttctctgtacctaccccacgc
accccgcgcaccccacgtggtgtaggcactgccagtgggcagggctccatcaagcaggac
ggtacagagctgagctcgcccatttccacaccctccactggcctgccccttagctcggtg
gagccactggcatcagggccggttttacccgaagcgcacagcctctacgtcatcttgctt
ctctctgattctgtcctggatgtattcaaggaccgcagctttgacagctgctgcatctgc
gcttgcaatatgaacgtgaagggtgctgatgtggggatttacatccctgactcaacccgt
gaggatcagtatcgctgtatgtgtggcttcagtgccattgctaaccgacgtctggcgcac
ggtgcaggactcttccttgaggatgagctggatatctttgggcgtggctcagaggcagga
cgggcagctgagaggaggctggcactgggcaggagggacacacctactggtgggaggcgt
gcccaggagcagactccaataaaggtgttagaactgattcaggagcagtgttcccagcct
atcttgtctgtggcatcgctgcacagtcctgctgcttgttcttgccgtagcaggcagagg
gcgctgttgcagagctgggtggctgaccgactatgggcagacagtagcgatgcatgtgtg
gagtgttacaatgctctggtgcaggggctgcagtacgtggacaatgcagctggtgggaag
gtggagcaagctttagtcagaagcagtgcacttcactcctggcctcacacaaatgtgttg
gatatcagcatgctgtcctctcaggatgtagtacgcatgctgctgtctctgcagcccttc
ctgcaagatgccattcagaagaagcgcactggccggacctgggaaaacatacaacacgtg
cagggcccgctcacatggcagcagttccacaaaatggctggaagaggttcttacggttca
gaggaatctccagagccactccccattcccacactgttattaggttatgaccgagacttt
atggccttgtcgcctttggctctgcctttttgggagaagttgcttttggagccatacgga
ggtcaaagagatgttgctttcctggtcctctgccctaataatgagatccttcttgctgga
gccagaaccttttttcaggagctcagtgctgtctatgagtcatgtcgcttgggcaaacac
catccattggcccggatgaccagagatggcatagtaccagttggaactatggaatctgca
aagccggaggagaatggaggagaggtggatgaatggatgacaggaccatgggcaggtcaa
tacagagaggatcatttaagaaaactcaagctctatgcccaaacctgcaagcagaaatta
gctccacagctctcaactctgtcattagacagcaatcttctcctgcccccaaagcctcaa
tctagctcagctcctgctccttccaaccagctgaaccccagcactggagcccctgaagga
gaaacatctacagcagcaacaacagcagcagcaccaacagcaccaacagcaggagcccca
gcaaacacacccacgcctacaagtaccagcacgggtcaggccagcacagaaggcacagat
acacaaagtgtccctaacacaactccaaaccagcagagtcatccaacagagaatgctgag
agcttggcagagcgagagcgaatcggcattcccacggcagcacagtcggcggatagccac
gcctaccctccagccatagtgctgtacctggtggacccctttttgtgctcaggctcaggg
gtggggtcaggggaagaagaggaagcagaagaggtgcagtcacgcagcatgtggttgctg
gcacttctgcgctgctacacagatatgctgagctcactgccagagaacatacagtcagcg
ctggtgctacaggtggtaccgtgtcagtacctgttacagccagccagtggtgagagtcct
ctgtacctgcagcacctgcggtcgctggctttctctgcccattcgcagtgcagacggcgg
cttcctactcaaacgcacatcaaatccctcacgggttttggtccggctgccaccattagt
actttgttcaagagtgtggagaacccgagctctatgcaagtgtactctcctccgttcgtc
ctggcccctctgcgcactaagcaaccagacgtaggagaggaagcttccacccgctacaat
gtgctcttcgttgggtattgcctgtctcatgaccagcgctggatacttgtttcttgcact
gatcagcagggggagctcttagagacctgcatcatcaacattgatgtacccaacaggtct
cgccgacccaagttctccccacgcaaaataggcctgcagaaactgtgggagtggtgtatt
ggtatcatccaaatgacagcaataccttggaggattgtgatcgggcggttgggtcgatta
ggtcatggcgagctgaaagactggagtctgctgctgggagaacactctttgcactcgatt
agcaggcagctgcgtgaggcatgtcgcatgtgtggaatttcagccgccgattcgccatcc
atcctcagtgcctgcctggtctccatggagccccaggggtcctttgtggtcatgccagat
gctgtgactatgggttcagtgtttggccggagcacggctctcaacctgcagacgtctcag
ctcaacaccccacaggatgcttcctgcacccatatcctggtctttcctacttcctccact
acggccccaagttcctaccctactgaggacaacacagacgatatatttggcctgcctttc
acggatgacctggagaaagacattgagcatgatatgatgcttatcaccggaaaccttcac
gcttcccctaacacctcgccagtgccttcccctggctccccctgtggtctgggggtgggc
tcccatttccctcacactaggagtcagggtgagcggttgttgtcccgtgaggctcctgag
gagctaaagcagcagcccctggctttaggctattacgtctccactgctcaggcagaagga
ctgcctcactggttctgggcttcgtgtcctcaagcgcagaaccaatgtccactctttctc
aaggcttctctgcaccaccacatctccatcgctcagacagacgagcttgtctccagcaag
acatcccagaggaacccacatccactggactccaaaaccacttcagatgtgctcaggttt
gtgctggagcagtacaacgccctctcctggttaacctgcagcccggccacacaagaccgc
cgctcctgcctccctgtgcacttagtcatcctcacacagatgtacaacgccatcctcaac
atcttatag
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