Tachysurus fulvidraco (yellow catfish): 113641014
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Entry
113641014 CDS
T08119
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113641014
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113641014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
zf-RING_4
zf-Nse
Prok-RING_4
DUF4200
Motif
Other DBs
NCBI-GeneID:
113641014
NCBI-ProteinID:
XP_026999389
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All DBs
Position
6:complement(25205222..25209043)
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AA seq
470 aa
AA seq
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MASKFSEEDFSCPVCCEIFKDPVVLSCSHSVCKVCLQQIWETKGSRECPVCRTKSSMSDP
PISLALKNLCETFLQERSPRSSSGSETICSLHSEKLKLFCLDDQQLVCLVCRDSRKHTNH
KFCPVDEAATDCKEELKTALKPQQEKLKIFTDCKLNWSQTAEHIKIQAQQTEHQIKEQFE
KLHQFLQDEEAVRIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIRAIEEEMRAEGILF
LQNYKATVKRAQCTLQHPEGLSGALIHVAKHLANLKFRVWEKMQDTVQYTPVTLDPNTVY
NKLIVSDDLTSVRLSDEKQKLPDNPERFDQCRCILGSEGFNSGTHCWDVEVGDNTDWVVG
VMKESVQRKGGIITKSGIWYVRYYKGEYKACSTPQIFTPLSVEQKLQRIRVKLDWDRGKL
SFYNPLTNTHIHTFTHTFTDKLLPYLCVFAKQCPLKILPLQCSVRVDQIS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaagttttcagaagaggacttctcttgtcctgtgtgctgtgaaatcttcaag
gatcctgttgttctgagttgcagtcacagtgtgtgtaaagtgtgtttgcagcagatctgg
gagaccaaaggatccagagaatgtcctgtttgtaggacaaagtcatctatgagtgatcct
cccataagtctggccttaaagaacctgtgtgagacttttttacaggagagaagtccaaga
tcttcatcaggttctgaaacaatctgcagtctgcacagtgagaaactcaaactcttctgt
ctggatgatcaacagttggtgtgtttggtgtgtcgggattcaagaaaacacaccaaccac
aaattctgccccgttgatgaggcagcaacagactgtaaggaggagctcaaaactgcactg
aagccccaacaggagaaactgaagatctttacagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacagacagagcatcagattaaggaacagtttgag
aaacttcaccagtttctacaagatgaagaggcagtcaggatcgctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcagagccatagaagaggagatgagagctgaaggcatcctgttc
ttacaaaactacaaggccacagtgaaaagagcccagtgcacactgcagcatccagagggg
ctttcaggagcactgatccatgtggcaaaacatctggccaacctgaagttcagagtctgg
gagaagatgcaggatactgtccaatacacacctgtaactctggaccccaacactgtttat
aataaactcattgtatctgatgatctgaccagtgtgagactcagtgatgagaaacagaaa
cttcctgataatccagagaggtttgatcaatgccgctgtatcctgggctctgagggcttt
aactcagggacacactgctgggatgttgaagttggagacaatacagactgggttgtgggt
gtgatgaaagagtctgttcagaggaagggggggataatcaccaaaagtggaatctggtat
gtgcggtattataaaggtgaatataaagcatgttctacaccacagatattcactcccctc
tcagtagaacaaaaactccagaggatcagagtgaaactggactgggacagaggaaagctg
tcattctacaaccctctcactaacacacacatacacactttcacacacacatttactgat
aaattactgccatatctatgtgtttttgctaaacaatgtcctctaaagattctcccactt
cagtgctctgtaagagtggatcagatcagttag
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