KEGG   Tachysurus fulvidraco (yellow catfish): 113641014
Entry
113641014         CDS       T08119                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113641014
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    113641014
SSDB
Motif
Pfam: PRY SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 U-box zf-C3HC4_4 zf-RING_5 zf-RING_2 zf-RING_10 zf-RING_6 zf-RING_4 zf-Nse Prok-RING_4 DUF4200
Other DBs
NCBI-GeneID: 113641014
NCBI-ProteinID: XP_026999389
LinkDB
Position
6:complement(25205222..25209043)
AA seq 470 aa
MASKFSEEDFSCPVCCEIFKDPVVLSCSHSVCKVCLQQIWETKGSRECPVCRTKSSMSDP
PISLALKNLCETFLQERSPRSSSGSETICSLHSEKLKLFCLDDQQLVCLVCRDSRKHTNH
KFCPVDEAATDCKEELKTALKPQQEKLKIFTDCKLNWSQTAEHIKIQAQQTEHQIKEQFE
KLHQFLQDEEAVRIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIRAIEEEMRAEGILF
LQNYKATVKRAQCTLQHPEGLSGALIHVAKHLANLKFRVWEKMQDTVQYTPVTLDPNTVY
NKLIVSDDLTSVRLSDEKQKLPDNPERFDQCRCILGSEGFNSGTHCWDVEVGDNTDWVVG
VMKESVQRKGGIITKSGIWYVRYYKGEYKACSTPQIFTPLSVEQKLQRIRVKLDWDRGKL
SFYNPLTNTHIHTFTHTFTDKLLPYLCVFAKQCPLKILPLQCSVRVDQIS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcttctaagttttcagaagaggacttctcttgtcctgtgtgctgtgaaatcttcaag
gatcctgttgttctgagttgcagtcacagtgtgtgtaaagtgtgtttgcagcagatctgg
gagaccaaaggatccagagaatgtcctgtttgtaggacaaagtcatctatgagtgatcct
cccataagtctggccttaaagaacctgtgtgagacttttttacaggagagaagtccaaga
tcttcatcaggttctgaaacaatctgcagtctgcacagtgagaaactcaaactcttctgt
ctggatgatcaacagttggtgtgtttggtgtgtcgggattcaagaaaacacaccaaccac
aaattctgccccgttgatgaggcagcaacagactgtaaggaggagctcaaaactgcactg
aagccccaacaggagaaactgaagatctttacagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacagacagagcatcagattaaggaacagtttgag
aaacttcaccagtttctacaagatgaagaggcagtcaggatcgctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcagagccatagaagaggagatgagagctgaaggcatcctgttc
ttacaaaactacaaggccacagtgaaaagagcccagtgcacactgcagcatccagagggg
ctttcaggagcactgatccatgtggcaaaacatctggccaacctgaagttcagagtctgg
gagaagatgcaggatactgtccaatacacacctgtaactctggaccccaacactgtttat
aataaactcattgtatctgatgatctgaccagtgtgagactcagtgatgagaaacagaaa
cttcctgataatccagagaggtttgatcaatgccgctgtatcctgggctctgagggcttt
aactcagggacacactgctgggatgttgaagttggagacaatacagactgggttgtgggt
gtgatgaaagagtctgttcagaggaagggggggataatcaccaaaagtggaatctggtat
gtgcggtattataaaggtgaatataaagcatgttctacaccacagatattcactcccctc
tcagtagaacaaaaactccagaggatcagagtgaaactggactgggacagaggaaagctg
tcattctacaaccctctcactaacacacacatacacactttcacacacacatttactgat
aaattactgccatatctatgtgtttttgctaaacaatgtcctctaaagattctcccactt
cagtgctctgtaagagtggatcagatcagttag

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