Tachysurus fulvidraco (yellow catfish): 113641064
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Entry
113641064 CDS
T08119
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04144
Endocytosis
tfd04145
Phagosome
tfd04148
Efferocytosis
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113641064 (rab5b)
04145 Phagosome
113641064 (rab5b)
04137 Mitophagy - animal
113641064 (rab5b)
04148 Efferocytosis
113641064 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113641064 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113641064 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113641064 (rab5b)
04031 GTP-binding proteins [BR:
tfd04031
]
113641064 (rab5b)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
113641064 (rab5b)
Endosome - Lysosome transport
113641064 (rab5b)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113641064 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
113641064 (rab5b)
Exosomal proteins of colorectal cancer cells
113641064 (rab5b)
Exosomal proteins of melanoma cells
113641064 (rab5b)
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
113641064 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
113641064
NCBI-ProteinID:
XP_026999458
LinkDB
All DBs
Position
6:24693914..24703644
Genome browser
AA seq
214 aa
AA seq
DB search
MTTRGNARTNGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKSDLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSSRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccgtgggaacgctaggaccaacgggaaccttccccagaccaagatctgccag
tttaagttggtgctgctgggagacatggcagtgggcaagtccagcctggtccttcgcttc
gtcaagggccagtttgatgagttccaggaaaccaccattggagctgctttcttggctcag
tcagtttgcctggacgacacgacggtgaagtttgagatttgggacacagctggacaggaa
cgctaccacagcctggcacctatgtactaccgcggagcccaagcagccatcgtagtgttt
gatattacaaaaccggagacgtttgagcgagcgaaggcctgggtgaaggaactccagagg
caggccagtcccaacatcgttattgcactggcaggaaacaagtcagacctcgctgacaag
agactggtggagtacgaggaagctcagacgtacgctgaagacacaggattgttgttcatg
gagacttctgccaagactgctatgaacgtgaatgagttattcctggccattgcgaagaag
atgccgaaaacagacactcagaacccgacgcacgccgcccgacacaggggagtcaactta
caggacccagacgcccaatccagcaggagctgctgcgggaactag
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