Tachysurus fulvidraco (yellow catfish): 113641293
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Entry
113641293 CDS
T08119
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a isoform X1
KO
K17936
sorting nexin-27
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113641293 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113641293 (snx27a)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Others
Others
113641293 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113641293 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17_FERM_C
PDZ_2
USP7_C2
SNX17-31_F2_FERM
DarA_N
Motif
Other DBs
NCBI-GeneID:
113641293
NCBI-ProteinID:
XP_026999722
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Position
7:12597248..12619455
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AA seq
556 aa
AA seq
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MADVEGDDRGAPTCPVTLSTASRHSSGGHTVTAGPRIVRIIKSESGYGFNVRGQVSEGGQ
LRSINGELYAPLQHVSAVLPGGAAHRAGVLKGDRILEVNGMSVEGATHKQVVDLIRTGEK
ELVLAVLSVPPQEVDGLDSGEDGSAPLSYDYSDKQAVPISIPTYKHVEQHGERFVVYNIY
LSGRQLCSKRYREFSILHQNMKREFASYPFPKLPGKWPFSLSDQQLDARRRGLEEYLEKV
CSVRIIGESDIMQEFLSESDENYNGVTDVELRIAMPDKTTISVRVRKNSTTDQVYQALVM
KVGIDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSVEE
QELLQENPLALHYCFHQSQDDVKKGFIKAEEKSYQLQKLAEQRKMTTYLNLLRTCEGYNE
VAFAHCPCDSRRRGHVIAAVSIHHFKLHACTEDGTLENQVIVFEWSEMQRWDTDEEGMAF
CFEYVRGEKKPRWVKIFTPYFNYMHECFERIFYELSWRKEVEEEASDKDNKNCNEYLPPL
EQQKRWHHLGKEIATT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagaaggagatgatcgcggcgctccgacgtgcccggtaacgctgtccacg
gcgtctcgacacagctccgggggacacacggttacggcaggaccacgtatcgttcggatt
attaaatcggagtcgggctacgggtttaacgtccgcgggcaggtcagcgaaggcggccag
ctgcgcagcattaacggggagctgtacgcgcctctgcagcacgtcagcgccgtgttaccc
gggggggcggcacacagagctggggtactgaaaggagaccggatactagaggtgaatggc
atgagtgtggaaggcgctacacataagcaagtggtagacctgatccggacaggagagaaa
gagctggtgcttgctgttctgtctgttccaccacaagaagtagacggtctggactctgga
gaggacggttcagctcccctgagttatgactacagtgacaagcaggctgtgcccatctcc
atccccacctacaagcacgtggagcagcatggagagagatttgttgtatataatatctat
ttatctggcagacagctgtgctcaaagcgctaccgggaattttctattctgcaccagaac
atgaaaagagagtttgcctcgtacccatttcccaaacttccagggaaatggcctttctct
ctctctgaccaacagctagatgcccgtaggagagggctggaggaatacttggagaaagtg
tgttcagtgaggatcattggagagagtgacattatgcaagagttcctctctgagtcagat
gagaactataacggtgtaactgatgtggagttgcgaatagcgatgccagataagaccacc
atttcagtgagagtgcgcaaaaacagcaccactgatcaagtgtaccaggccctagtgatg
aaggttggcatagacagcatcatggccagttactttgccctttttgaagtgatcaaccac
tcctttgttcgtaagttggcccctaacgaattcccccacaagctgtatgtgcagaactac
acgtccgcggtgccggggacctgtctggcgctgcgaaagtggcttttcagcgtagaagaa
caagagcttctccaggaaaatcctctagctctccattactgcttccaccagtcgcaggac
gatgtgaagaagggattcatcaaagcagaggaaaagtcctatcagcttcagaagttagcg
gagcaaagaaagatgactacgtacctgaatttgctccgcacatgtgagggctataatgaa
gtagcgtttgcccattgcccatgtgactcacggaggagaggtcatgtgatcgccgctgtc
agcattcaccatttcaaacttcacgcttgcactgaggatggcacactggagaaccaggtt
atagttttcgaatggtctgagatgcagaggtgggacacggacgaggagggaatggctttc
tgctttgaatatgtacgaggggagaaaaagcctcgctgggtcaagatctttactccttat
tttaactacatgcacgagtgctttgagaggattttctatgagctcagctggaggaaagag
gtggaagaggaggcttcagacaaagacaacaagaattgcaatgagtacctccctccactg
gaacagcagaagcgatggcaccacctagggaaagaaattgccaccacttag
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