Tachysurus fulvidraco (yellow catfish): 113641307
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Entry
113641307 CDS
T08119
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113641307 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113641307 (cnot3b)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113641307 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113641307 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
113641307
NCBI-ProteinID:
XP_026999760
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All DBs
Position
7:11756458..11785379
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AA seq
920 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTSTIYMLNMKVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKLIERHRYHI
CMLETILRMLDNDSVQVDSIRKIKDDVEYYIESSQDPDFEENEFLYDDLDLEEISQPLVA
TSPPAHAEDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEFSQSPVKN
GNPSSLSSTSSSSSSSLGSSSTSVVSVATIASSSSSSGGGGSSLLSNIGGHVQNSCSYSS
AIQQQMQHGQQQHQSKNAFNFQSSTSAPAAPSSILLPNPTSTTSPSSINTPSNQAQSPLT
PSPASSLSHALSLGLAKSGAPATSGVSQIPSLGLSGMPASRTSLPAPLQASTPAPYAQAA
ASGTSNATVNANVTSSSGVPTAGTNGNSVSTGLLGSAPGTTGMSSAVLCLGTTQSTVQPS
SLVTPSPLGVGLVQTSSVGVIGSNGGNSTSGSATAVGSSGLAQPPSGQKQNGGTKEAFIP
PALSPAYSAVVADSVSDSALGSASQLQTNQASTLNSTTNLPKDSVSSLLGPITLATSSPS
PSYSESKPSGGSLLNGPHSYTQAADAIKPQEPLSSLKLMAERAAQGSGLEGELSALHLTG
VNKVGEWNTRGCNGSDIFPSSTAPSGTPTAPQSSLTEVNIPPSLGVCPLGSVPISKEQQY
QHIMQEAAWTHMPHPSDSERIRQYLMRNPCPTLPYHHQVPPPHSDSVEFYQRLSTETLFF
IFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWG
QRKKEGFTFEYRYLEDRDLQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggcgaaattgatcgatgtctaaagaaagtggccgaa
ggagtagaacagtttgaagacatttggcagaagcttcacaatgcagccaacgctaaccaa
aaagagaaatatgaggctgacctcaagaaagagataaaaaaattacagcgcctccgagac
cagattaagacgtgggtggcctcaaacgagatcaaagacaaaaggcagctagtggacaac
cgcaaactaatagagacacaaatggagcgctttaagattgtggagcgagaaacaaaaacg
aaagcgtactccaaagagggactcggtcttgctcagaaagttgatcctgcacaaaaagag
aaagaggaggttggacagtggctcacgtcgacgatatacatgttaaacatgaaagtggac
cagtttgaaagtgaggtggagtcactctcagttcagacacggaagaagaaaggagacaaa
gagaaacaggatcggatagaagagctgaagaagttgattgagaggcaccgctaccacatc
tgcatgctggagaccattttgcgaatgctagataacgactcggtacaggtggattccatc
cgcaagatcaaagatgacgtggagtactacatcgagtcttctcaggatcctgactttgag
gagaacgaattcctctacgatgacctggacctggaggaaatatcccagcctctggtcgcc
acttctcctccagcgcatgcagaggatgaaatcttccagcactccagttccacaccgact
tccaccacttcgtcttccccaatacctccatccccggctacttgcactacaaattctgag
gatgataagaagcgaggtcgttccacagatagtgaattcagtcagtctccggtaaagaat
ggcaatccatcatctctttcctcaacctcatcgtcctcttcatcctctttgggatcctcc
tctacctcggtggtgtctgtggccaccatagcaagcagcagcagcagctcaggaggtgga
ggcagcagcctcctgagcaacatcggaggccatgtacaaaactcatgcagctacagctct
gccatccagcagcaaatgcagcatggccaacagcagcatcaatccaaaaatgcctttaac
tttcaatccagcacctctgcccctgcagctccctccagtatcctcttacccaaccccaca
tcaaccacgtctccttccagtatcaatacacccagcaaccaggcccagtctccgctcact
ccaagtcctgcttccagcttaagccatgctctcagcctgggcctagccaaaagtggtgca
ccggccaccagtggtgttagccaaattcctagccttggtctttcagggatgccggcatcc
aggaccagtctgccagcgcccctgcaagcttccaccccagcaccatatgcccaggccgct
gcatctggcacttccaacgccacagttaacgccaatgtcacaagctccagtggcgttcca
acggctggcacaaatggaaacagtgtttcaacaggtctccttgggtcagcaccaggcact
acaggcatgagcagtgcagttttatgtctcgggaccacacagtctacagtgcagccctcg
tctttggtgacgcccagccctcttggagtgggactggtgcagacgagcagcgtgggcgtc
attgggagtaacgggggaaactctacatcaggaagtgcaacggctgtggggagctcaggg
cttgcacagccacctagtgggcagaaacagaatggtggcacgaaagaggctttcattcca
cccgctctctctccagcctatagtgccgtagtagcagatagcgtgtctgattctgccctt
ggtagtgccagccagttacaaaccaaccaagcctcaaccttaaattccacaaccaatctg
cctaaggacagcgtgtccagccttctggggcctatcactcttgctaccagctcaccgtcg
ccgtcgtatagtgagagtaaaccaagtgggggaagcctgctgaatggacctcactcttac
acacaagcagctgatgccatcaagcctcaggaaccgctcagttctctgaaattgatggca
gagagagcagctcagggctcaggtttagagggagaactctctgcactccatcttactgga
gtaaacaaagttggagagtggaatacacgggggtgcaatggttcagatatcttccctagt
tccactgccccatcaggtacccctacagccccccagtcttctcttacagaggttaacatt
cctccatcgctgggcgtctgtcctctaggttctgttcccatctccaaagaacagcaatac
cagcacattatgcaagaggcagcatggacacacatgccccacccgtcagactcggagagg
atcaggcagtacctgatgaggaatccctgtcctacattgccttatcatcaccaggtgcca
ccaccacactcggactctgtggagttctaccagagactgtccacagagacgctgttcttc
attttctactaccttgagggcacaaaggctcagtatttggcagccaaagccttgaaaaag
caatcctggaggttccacacaaagtacatgatgtggttccagaggcacgaggagccgaag
accatcactgacgagtttgagcaggggacatacatttactttgactatgagaagtggggc
cagaggaaaaaggaaggcttcacttttgagtacaggtatctggaggaccgggatctccag
tga
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