Tachysurus fulvidraco (yellow catfish): 113641353
Help
Entry
113641353 CDS
T08119
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113641353 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113641353 (prpf4)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113641353 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
Beta-prop_Nup120_160
WD40_RFWD3
DUF7779
Motif
Other DBs
NCBI-GeneID:
113641353
NCBI-ProteinID:
XP_026999841
LinkDB
All DBs
Position
26:3625461..3635435
Genome browser
AA seq
507 aa
AA seq
DB search
MSDEDEAPLVKKARIFYGSIEEKEKERLSREGIVSIGKDAIKAGIEAGNINISSGESMEM
EDRVSDRQAEVLAEFERRKRARQITVSTDDTEVKACLRALGEPITLFGEGPAERRERLRN
ILSVLGPDALKKSKKDDEKAKRSQEDAQQTWYHEGPDTLKEARIWLAKYSLPKAVQRLEA
ARAQREIPESTRTVRQQELHKTLRNLNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLC
KLWNVPDCSLVRTLRGHDTNVGSVSFHPQATLTLDESDVNMASCAADGSVKLWSLDSDEP
VADIEGHFMRVSRVSWHPSGRFLGTTCYDNSWRLWDLEVQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDSFGRVWDLRTGRCVMFLEGHLKEVYAIDFSPNGFHVATGSGDNTCKVWD
LRKRRCIYTIPAHQNLISSVKFQPTDGHYLLTGAYDNMAKVWTHPGWSPLKTLAGHEGKV
MGLDLSPDGHLIATCSYDRTFKLWVAD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaggatgaagcccctttggtgaagaaggctcgaatcttctatggaagtatt
gaagaaaaggaaaaggagcgactttctcgtgagggaatcgtttcaatcgggaaagatgcg
attaaggctggaattgaagctgggaatattaacatctccagtggtgagtccatggagatg
gaagaccgtgtaagcgataggcaggctgaagtactggctgaattcgaacgcagaaaaaga
gctcgacagatcaccgtgtctaccgatgacacagaagtcaaagcatgcctacgagccctc
ggagaaccgatcacgctgtttggcgaaggacccgctgaaagacgagagaggttgaggaat
attttgtcggtattgggtccggatgctctgaaaaaatccaaaaaggacgacgagaaagca
aaacgttcacaagaggacgctcagcagacgtggtaccacgagggtcccgacacattgaag
gaggcacgtatctggctggccaaatattcactgcccaaagctgtgcagaggctcgaagct
gccagggctcagagagagattcctgaatctacacgcaccgtacgacagcaagagcttcac
aagacgctcaggaacctgaataacttctgcagtcagattggagacgatcgtccgatctct
tactgccagttcagccccaactccaaactgttagtcaccgcgtcatggagcggtctgtgc
aaactctggaacgttccagactgcagtctcgtccgcacgttaagaggtcacgataccaac
gtcggatcagtcagcttccatccgcaagccacgctcacgctcgacgagtcggacgtcaac
atggcctcctgcgctgcggacggatctgttaagctgtggagtttagacagcgatgagcca
gttgcagacattgagggtcacttcatgagggtgtctcgcgtatcatggcatccttctggt
cgctttctgggcacaacatgctatgataactcgtggcgtctgtgggatctggaggtccag
gaggagatccttcaccaggaaggtcacagtaaaggagtccatgacttgcatttccatccc
gatggctccttagcaggaaccggaggtctggactcgttcggtcgtgtgtgggacctgagg
accggccgatgtgtcatgttcctggagggtcatctcaaagaggtctacgcaatcgacttc
tccccaaatggctttcatgtagctacagggagcggtgacaacacatgtaaagtgtgggac
ctgcggaagaggaggtgcatttacaccatccccgctcaccagaacctgatctcatctgtc
aagttccagcctacagacggtcattatttgctaaccggtgcttatgacaacatggcgaaa
gtgtggactcaccctggatggtctcctctgaagaccctagcaggacacgaaggcaaagtg
atgggactggacctgtctcccgatggacatctcattgctacctgctcgtacgaccgcacc
tttaaactctgggtggctgattga
DBGET
integrated database retrieval system
