Tachysurus fulvidraco (yellow catfish): 113641362
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Entry
113641362 CDS
T08119
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113641362 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113641362 (grin2da)
04082 Neuroactive ligand signaling
113641362 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113641362 (grin2da)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113641362 (grin2da)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113641362
NCBI-ProteinID:
XP_026999850
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All DBs
Position
7:11905463..12001181
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AA seq
1892 aa
AA seq
DB search
MVVQPAISLLLAVLACSGPAWSSPPLLLRPRERERDSGGASGGVNIAVVHSGSSHLPETS
VGVGGTLAAGAGTAAGTGVGTGWSGQVGESVMTPWGPANVIWLAVNESSPGSLLLQLCEL
LGSTPLQGLVFEQEKPPPPERAPLAPVLEFVSAQTGVPIMAVGGGAGLGREPQESGSVYL
QFSCSTALQLEVIFEVLEEFDWTSFSVVSTRQHGYEDFLDMVEGITDGSFIGWERKSMVM
LNLTDDPGGARTRRLLKENEAQVRLLYCSHEEAEQIFRAAWLSGQATPSHMWFAVGPALS
GLGVEGLPKALFTVRPQGWRDEPRRRIAKGVSVLTHGAMALRREYGGARGTSFAGNCMTD
GNQTQRIPDRIRYFSNITLSGRDYSFNDDGYLANPLVDVISYTAGRGWEEVGWWENGVLR
LRYPPWSRYGPFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNTSV
VLEGIHSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNINGEWNGMVGEVVSKR
ADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVM
CLSVVAVTVFVFEFFSPVGYNRSLQSGKRAGGSKFTIGKSVWLLWALVFNNSVPVENPRG
TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTDQYPPLRFGT
VPNGSTEENIRSNYPSMHQFMVRHNQRGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEG
CKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDK
IEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMGRSKGLDFLLAFSRG
MYSCCSFEDETTPLGNPTLPQYDPISPMPPPAPPHMVTANVANSSITTAQHQQQQKLHQQ
QPVYNALIPGSLQSAGHSGMALGPSNSPILGAPMPCSTFLPRHDRRLAVVDRWTRPKTGP
EKTGAINSGITDIAQFPQGMPPQWAAVGGGEGGLDEYKRYYGPIDPEGLGEPQSIVSQTP
KTTHQTKPLGNPRLPQKKQASGHLPINPTLPHSSPPQQSLWRRTSLSKRKGSGGPLYENI
LPLGRRGGARYGGRDGAGRRGRHPPPLPLPVPLPFSSPNQIPISPSPSVHYTSSSTSSSS
STSSSVSVSRSNSPSYSTSSYSSSQSFKYRAGERDAYDEFDTDELTEESSLLLGRRKSHS
HMSSRSLPCSPPPPIPPRKPCPQKAQMRDNATSQLAQLQEWWASWGEKERARRASDVRSK
DKEEKRYYKERERERRRRKKDRKKKKRGEREREREHKRHKVKKKKKKDGKSRKREKEKRS
GQEEAEIKDKEVFEKGIEQNLPSYPELRRSSFQKKSESSMRSYDWDMKREGGRRESDNPE
GGDEEGARRKEKHHRNPQPYRHSRPKSSSKRYPTSSKCSTSVKFWGSGNTRSESPSSFLP
LFPLNYKKTQSFESEREEYGKGGEIRPLLGKNGRGKTYSREGLSFHEWDSEEEEGEESEE
VDRTEEQRRRRRRRRRESRVIETESERERDKTVEIYTDDEGSSGEFGKFERYWEGHEGRA
VGGIGGGGWFFGTYPSRERGGSINSRDDPFLGLGGGESSCGFGEGSRWGSGGLGSNQWPP
SPLTPPPPRRYWSVDKLPVKTEKKSKRRSHEKSECHTACSCQSPHHYKWNRVTSRSQEDL
LPHCQSFSNINRPKRQSSKPDQAQGQVKSGSQSNLSGHRSQRSERSRELSSPQTLPPSLP
APALPAPPSSAHPVHVPLPTSSSSVSSPSAISSATGALQPSSISSSSAKLQYQRLCSVPQ
PQRYQSPHLPFKTKSLCSRRDSAHFSSVESEV
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgcagcctgcaatatcactcctattggctgtgctggcgtgcagcgggccggcc
tggtcgtcccctccgctactgctccgcccccgggagcgagagagggactcgggcggggct
tcgggcggagtcaacattgccgttgtccactcgggctcctcccacctcccggagacgagt
gtaggggtagggggcaccttggcggcaggtgcaggcacagcagcaggaacaggagtgggc
acaggctggtcggggcaggtgggtgagagtgtgatgacaccatggggcccagccaatgtc
atctggttggcagtaaacgagagcagcccagggagccttctgctgcagctgtgcgagctg
ctgggcagcacaccactgcagggccttgtgttcgagcaggagaagccaccacccccggaa
cgtgccccgctggcaccggtgctggagtttgtctcagcacaaaccggtgtgccaatcatg
gctgtaggaggtggagctgggctgggcagagagccacaggagagtggctcagtctacctg
cagttctcatgttccaccgcattacagttggaggtcatatttgaggtactggaagagttc
gactggacatctttctcagtggtcagtactcgccaacatggttatgaggacttcctggac
atggtggagggtatcacagatggctcatttattggatgggaaagaaagagcatggtgatg
ctcaaccttactgatgacccaggaggtgcaagaacccgcaggctgctgaaagagaatgag
gcacaggtgcgactcctgtactgctcgcacgaagaggcagagcagatttttagggcagca
tggctctcaggccaggctactccttcacacatgtggtttgctgtgggcccagccctttct
ggacttggagtggagggtctgcctaaggctttgtttactgtgcggcctcagggatggcga
gacgagccacgtcgtcgcattgctaaaggcgtatctgttctgacgcatggagccatggca
ctgagaagggagtatggtggagccagagggacaagctttgccgggaactgcatgaccgat
ggcaaccagacacaaagaattcctgacagaatcagatacttcagtaacatcactctgtct
ggacgagactactcctttaatgatgatggctatttagccaatccactagtggatgttatc
tcctacactgcaggtcggggctgggaggaggtgggctggtgggagaatggggtgctgcgt
ctgcgctacccaccctggtcacgttatggtccattcctcaaaccactggatgacagtcaa
cacctgcgtgtggtcactctggaggaaaggccttttgttattgtcgagccagccgaccct
ggaactggctcatgcattcgtgactctgtgccatgtcgtctacccctcaacaccagtgtg
gtgttggaaggcatacactccatgaagcattgctgcaaagggttctgcatcgatgtcctc
aagcgactggccaaaattgtgggttttacctatgacctctacctggtgacaaatggcagg
catgggaagaacataaatggagagtggaacgggatggtcggtgaggtggtgtccaaaaga
gcagacatggctatcggctcactgaccatcaatgaagagaggtcagaagttgttgaattc
tcagttccctttgtggagactggaatcagcgttatggtctctaggagcaacggcaccgtc
tctccatctgctttcctggaaccatacagtcctgcagtttgggtgatgatgttcgtcatg
tgcctgtctgtggtggccgtaaccgtttttgtctttgagtttttcagccctgttggatac
aaccgaagtctacaaagtggaaagagggcaggaggatctaagtttaccataggaaaatct
gtgtggctgctgtgggccctggtctttaataactcagttcctgtagaaaaccctagagga
accacaagtaagatcatggtgctggtttgggctttcttcgctgttatctttttggcaagc
tacactgctaacctggctgccttcatgatccaagaggagtacatagacacagtgtctggc
ctcagtgataagaagttccagcaccctacagatcagtaccctccccttcgcttcggcacc
gtcccaaatggcagcacagaagagaacattcgcagcaactaccctagcatgcatcaattt
atggtgcgccacaaccagaggggagttgaggaagccattgacaacctcaagaccggtaaa
ctggatgctttcatctacgatgcggctgttttaaactacatggcaaggaaagacgaaggt
tgtaaagtgatgaccattggttcagggaaggtgtttgctactacaggatatggcatcgcc
ctgcacaagaactctcgctggaagcgaccactagaccttgctttgctgcaactggtggga
gatgatgaaattgacatgcttgaacgcctctggctctctgggatttgccacaatgataag
attgaagtgatgagttccaagctggacatagataacatggcaggagtcttctacatgcta
ctggtggcaatgggtctaagtcttttggtatttgcctgggaacacctggtttactggaag
ctccggcactgcatgggtcgctcaaagggactggactttctgctggcttttagtcgggga
atgtacagctgctgcagttttgaagatgaaaccacccctttaggtaacccaacacttcca
caatatgatccgatctcccctatgccccctcctgctcctcctcacatggtgactgcaaat
gtagccaactcttccatcacaacagcacaacatcaacagcagcaaaaacttcaccagcaa
cagccagtgtacaatgcccttattcctggatctctgcaatcagctgggcattcgggcatg
gctcttgggccatcaaacagcccaattcttggagcacctatgccatgttccacattttta
cctcgtcatgatcgacgactggcagtggtggatcgttggacacgtccaaaaactggccct
gaaaagacaggtgccatcaatagtgggatcacagacattgcacaattcccacagggcatg
cctccacagtgggctgcagtaggtggtggagaaggaggtctggatgaatataaaagatac
tatggtccaattgatccagagggattaggagagccacaaagtatagtttcccaaactcca
aagaccacacatcaaacaaagcccttgggaaacccaaggctgccacaaaaaaaacaagcc
tctgggcatttgcccataaaccccactttgcctcattcttctccacctcagcagtcttta
tggaggagaaccagtctttcaaaaagaaaaggctctgggggacccctgtatgaaaacatc
cttcctttgggaaggagaggtggggcaaggtatggagggagggatggagcagggagaaga
ggtcgtcatcctcctcctttgcctcttcctgtgccacttcccttctcctcccctaatcaa
attcctatttcaccatcaccttctgtgcactacacctcttctagcacttctagctcctct
tccacctcctcttctgtttcagtctcacgatctaattctccttcttactctacctcttca
tactcatcatcacagagtttcaaatacagagcaggtgaaagagatgcatatgatgagttt
gacacagatgagcttacagaggagtcaagccttcttttgggtaggagaaaaagtcattcg
cacatgtcatctcgatccctaccctgcagtccacctccacccataccaccacgcaaacct
tgcccacagaaagcacagatgagagacaacgccactagccaactggcacaactccaggag
tggtgggcttcatggggggaaaaagagagggctagaagagcaagtgatgtaagaagtaag
gacaaagaagagaaacgctattataaagaaagagaaagggagagacgaaggaggaagaag
gatcgaaagaaaaagaagagaggagagcgtgagagagaaagagagcacaagagacataaa
gtaaagaagaaaaagaaaaaggatggaaaatccaggaaaagggagaaggaaaagcgatct
ggtcaagaggaagctgaaatcaaagataaagaggtatttgaaaaagggatagaacagaat
ctgccttcctaccctgaacttaggcgtagctcttttcaaaagaagagtgaaagctctatg
cggagttatgactgggatatgaaaagagagggaggaaggagagagagtgataatccagag
ggtggtgatgaagaaggagctaggagaaaagaaaagcaccacaggaaccctcagccctat
cgccattccaggccaaagtctagcagtaagcgctatcccacttcaagtaaatgctcaaca
tcagttaaattttggggtagtgggaatacacgttctgaatctccatcttcttttcttcct
ctttttcctcttaactataaaaaaacacagtcctttgagtctgaaagagaggaatatgga
aaagggggtgagattcgtccgcttttaggaaagaatggaagaggtaagacctattcaaga
gaaggcctgtcatttcatgaatgggattcagaagaagaggaaggggaagaatcagaagag
gtagatagaactgaggaacaaagaagaagaagaagaagaagaagacgggaaagcagggta
atagagacagaatctgaaagggaaagagacaaaacagtagagatctatacagatgatgaa
ggttcttcaggcgaatttggaaagtttgaaagatactgggaagggcatgaaggaagggct
gttggaggcattgggggtggagggtggttttttggaacttatccatctagggagagaggg
ggtagtataaacagtagagatgacccttttttgggattaggaggtggggaaagcagctgt
ggttttggagagggctcacgatggggatctggaggcttaggatccaatcagtggcctcca
tcgcctttaactcccccacctccacgaagatactggtctgtggacaaattacctgtgaag
actgaaaagaagtctaaaaggagatcgcatgaaaaaagtgaatgccatactgcctgttcc
tgccagtcgccccaccactataagtggaaccgagtgacctctcgtagtcaagaggatctg
ctgcctcactgccaaagcttcagcaacatcaaccggcccaaacggcagtcctccaaacca
gaccaagctcaaggccaagtaaaatctggaagtcagtcaaacctcagtggtcatagatca
caacgttctgagaggtctagagagttatcatctcctcagactctaccaccatctctgcca
gcaccagctctccctgcacctccatcatccgctcacccggttcatgttcctcttcctact
tcttcctcctctgtttcatcgccatcagccatttcctcagcaactggtgccctgcagccc
tcttccatatcctcctccagtgccaagctccagtaccagagactgtgttccgtgccccag
ccacagaggtaccaatcaccacatcttcccttcaaaaccaagagtttatgctcacgtcga
gactctgcccacttttccagtgtagagagtgaggtctga
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