Tachysurus fulvidraco (yellow catfish): 113641416
Help
Entry
113641416 CDS
T08119
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd02010
ABC transporters
tfd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113641416 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113641416 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113641416 (abca1a)
Transporters [BR:
tfd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113641416 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
113641416
NCBI-ProteinID:
XP_047671760
LinkDB
All DBs
Position
7:complement(30208037..30237732)
Genome browser
AA seq
2266 aa
AA seq
DB search
MAFSTQLGLLLWKNFTYRRRQTIQLLVEIIWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEASGAVGNFNNSIISRLLTDTKKILLYSQHDK
SLEGYKGLVRSLRNLQNNAAGFKLKDFLRDNETLSEFLEQNATLSNHAVQQIVEANVNLE
KVLIKGFGVHLRDLCNTTSLEEFVNIADRNVSEMTQKIICQAPADWLDSAESHFLSNLDF
LKPIRKDVRSNPKVVQDVSLATDTLLESLGSLAVELVSMKSWRDMRDEMQFLTGNATHSP
NHVYQAVSRIVCGHPEGGGMKIKSLNWYEDNNYKALFGNHNDGDGEPVSAYDNTSTPYCN
NMMKNLESSPISRMIWRALKPLLMGKILYTPDTPATRRIIHEVNKTFQELGVLRDLGGMW
EEMRVKVWDFMENSEEMDLVRTLLQNNASAQFFNDRLKGTDWRVEDISQFLSKASEDTRP
LGTAYTWRDVFNETDQAILTISRFMECVNLDKLEPVSTEERLVNKSVRLLDSRKFWAGIV
FPDMQADSSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYLQ
DIIEHGIIRALTGSKEKTGVYLQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
GIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGV
VYLFLVSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGTGIQWDNLLSSPMQEDNYSLTTSISLMLIDAVLYGI
LTWYIEAVFPGQYGIPRPWYFPLTKSYWCGETHGWTTASTTNKKENSEAVCIEEVPADLE
PGVYIENLVKVYRHGNKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRTDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARMKGLSEEKVRFEMDQIV
TDLGLPHKRKARTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDLDL
SLSSCHNSSSTVSYSKNSLKKDDSVSDSSSDAGLGSDHESETTTIDISLISNVIFKHVPS
ARLVEDLGHEITYVLPYEAAKDGAFVELFHEIDDRLVDLGISSYGISDTTLEEIFLKVAD
DNGVDAITSDGTILPIRHRRHAFGDHQSCLKPFTEDDSIDCTDSDGDPESRETDWLGVSD
GKGSHQVKGWGLKRQQFVALLWKRFLYAKRSRKGFLAQIVLPAVFVCIALVFSLIVPPFG
KYPSLELEPSMYEEQYTFISNDGPDDVHTNKLLGVLSDRPASRGQCADDGTSGSCQTRQS
DWTVPEIPKTISDMFESRNWSMENPSPLCECSCTEKKKMLPDCPPGAGGLPPPQIKVSST
NTLQNLTGRNISDYLVKTYAQIVGKSLKNKLWVNEFRYGGFSLGARSSQDLPSDEISKVI
SHMRTRFNLERGTAADRFLGGLSSFIHSLDTKNNVKIWFNNKGWHSIAAFLNVMNNGILR
ASLPARLNPAKFAIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSSTNL
PVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGGNE
IGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFA
MAVEGVVFFCITVLIQYRFCIKARDINAHLKPISEEDEDVARERQRILGGGGQSDILELR
QLTKVYKRKQKPAVDRLCVGIPRGECFGLLGVNGAGKTSTFKMLTGDSVITSGEAYLAGK
SVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIHKLGLV
KYADKSAGSYSGGNMRKLSTAMALIGGPPMVFLDEPTTGMDPKARRALWNCILSIIKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSDPRLEPV
MELIEHELPGSTLKEKHRNMLQYQLPSSLSSLARIFSILYKNKDQLHIEDYSVSQTTLDQ
VFVNFAKDQSDEDHIKDLLLNKSDAVVDFTQLDAFLVSAKAQETVV
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atggctttctccactcagctgggtttgctgctgtggaagaacttcacctaccgacggaga
cagaccatccagctgctggtcgagatcatctggcctctcttcatcttcttcattctgata
tctgtgcgactccactatcctccgtatgagcagcatgaatgccactttcctaacaaggcc
atgccatcagcgggcactctgccctgggttcagggaatcatctgcaatgccaacaacccc
tgtttccgctaccccactcctggagaggcctctggtgcggtgggcaactttaacaactcc
ataatctctcggcttctcaccgacaccaagaaaatcctcctgtacagccaacacgataag
agtttagaaggctacaaaggactcgttcgatctctgaggaatctacagaacaacgctgca
ggatttaagttgaaggactttctccgtgataacgagactctgtctgagttcctggagcag
aacgcgacgctgagcaatcacgctgtgcagcagatagtggaagcaaacgtcaacctggaa
aaagtgctgattaaagggttcggagtgcatctgagagatctgtgtaacaccacctcactg
gaggagtttgtgaacatcgccgatcgcaacgtctcagagatgacgcagaaaatcatctgt
caggcgcctgctgattggctggacagcgcggagagccacttcctgtccaaccttgacttc
ctgaaacctatacggaaggacgtcagatccaaccctaaagtggtccaggacgtgtctctg
gccacagatacccttctggagagtctgggatctttggctgttgagctggtgagcatgaag
agttggcgtgacatgcgggacgagatgcagttcctgactgggaacgccacacactcaccc
aatcacgtgtaccaagccgtgtcccgcatcgtgtgtggacacccagagggcgggggcatg
aagatcaaatccctcaactggtatgaagataacaactacaaggccctgttcggtaaccat
aacgacggcgacggcgagcccgtatctgcctacgacaacacatctactccatactgtaac
aacatgatgaagaatctggagtcgagtcccatctcacgcatgatctggagagcgctgaag
cctctgctcatgggaaagatcttatacacacctgatacacctgcaactcgcaggatcatc
cacgaggtgaataaaacgttccaggagctgggagtgctgcgggatttaggaggaatgtgg
gaggagatgagggtgaaagtctgggacttcatggagaacagtgaggaaatggatcttgtg
cgaactctgctccagaataacgccagcgctcagttctttaacgacaggctgaaaggaacg
gactggcgagtggaggacatttcacagttcttgtctaaagcctctgaggacacacggccg
ctgggtacagcgtacacgtggagagacgtgtttaatgagacagaccaggccattctcacc
atctcacgtttcatggagtgtgtgaacttggacaagttggagccggtgtctactgaggaa
cgtctggtgaacaaatccgtgcggctgttggacagtcgcaagttctgggccgggatcgtg
ttcccggacatgcaagccgactcgtccgagcttcctcctaatgtcaactacaagattcgc
atggacattgacaatgtggagcgtaccaacaagatcaaggatgggtattgggaccctggt
cctcgtgctgacccatttgaggatctgcgctacgtctggggaggattttcatatctgcag
gacattatcgaacacgggattattcgggctctgacaggcagcaaggaaaaaactggagtc
tacctgcagcagatgccgtacccatgttacgtagatgatattttcttgcgtgtgatgagt
cgctcgatgccgctcttcatgacgctggcctggatgtactcagtggccatcattattaaa
ggcattgtgtatgaaaaagaggcacgtctgaaggagaccatgaggattatgggattggat
aacgggatcctgtggctcagctggttcattagcagcctgatcccactgctcatcagcgcc
gccctgctggtcctcattctgaagatgggaaacctgctgccctacagtgacccgggcgtg
gtctatctcttcctggtctcctttgccgtcgtcaccatcatgcagtgtttcctgatcagc
acgctgttctctcgcgccaaccttgcagctgcctgtgggggcatcatctacttcaccctg
tacctgccctacgtcctgtgcgtggcctggcaggactacattggcttcggggctaaagtg
gtcgtgagcctgttgtctccggtggcgttcggcttcggctgtgaatactttgcactgttt
gaggagcagggaactggcattcagtgggacaacctactgtccagccccatgcaggaggac
aactacagcctcaccacctccatctccctcatgctgattgatgctgtactgtacggcatc
ctgacatggtacattgaggctgtcttcccaggtcaatacggcattcccaggccgtggtat
tttcccctcaccaagtcttactggtgtggagaaacacatggatggacgacagcttccacc
accaacaagaaagaaaattcagaagccgtgtgcattgaagaggtaccagctgatctggaa
cctggggtctacatcgagaacctggtgaaggtgtacagacatggcaacaaactggcagta
gatgacctcactctgggcttctatgagggtcagatcacatccttcctgggccacaatgga
gcaggaaagaccaccaccatgtccattttgactggcctgtttcctcccacatctggcact
gcttacatcatgggcaaagacatccgtacagacctaagcgccatccgtcagaacctggga
gtgtgtccacagcacaatgtcctgttcagcatgttgacagtagaggagcacatctggttc
tacgctcgaatgaagggcctgtcagaggagaaggtgaggtttgagatggatcagatcgtc
acagatttaggcctccctcacaaacgcaaagctcgtactagtcagctttcaggagggatg
caaaggaagctctctgttgctttggcatttgtcggaggttcgaaggttgtgatcctggat
gaacccacagcaggggtcgatccgtacgctcgcaggggcatctgggacctgctgctcaag
tatcgtccaggtcgaaccatcatcctctccactcaccacatggacgaggctgacatcctg
ggtgaccgcatagccatcatctctcatgggaagctgtgttgtgtgggatcctccctgttc
ctgaagacgcagctgggcactggatactacctaacactagtcaagagggacttagacctg
tctctgagctcatgtcacaactccagcagcaccgtgtcctattccaagaacagtctcaag
aaggatgacagcgtttctgacagcagctctgacgcaggcctcggaagtgaccacgaaagt
gagaccaccaccatcgacatctccctgatctccaacgtcatcttcaagcatgttccttca
gccagactggtggaggatctgggccatgagatcacctatgtgctgccttatgaagcagcg
aaggatggcgccttcgtggaactcttccatgagattgacgatcgcctcgtcgacctcggg
atctccagctacgggatttcagacaccacgcttgaggagatctttctcaaagttgcagat
gataacggagttgatgctataacttcagatggcactattcttccaataaggcatcgtcgg
catgcgtttggagaccatcagagctgtctgaagcccttcaccgaggatgacagcatcgac
tgcaccgattcggatggtgacccagaatcccgtgagacagattggttaggagtctctgat
ggaaaaggctcacaccaggtcaaaggttggggtctgaagaggcagcagtttgtggcgtta
ctctggaaacgtttcctttatgccaaacgctctcggaaaggattcttagctcagattgtc
cttccagctgtgttcgtctgcattgcccttgtattcagtctaattgtaccaccttttgga
aagtacccaagcctggagctggagcccagcatgtatgaggagcagtacaccttcatcagt
aacgatgggccagacgacgtgcacactaacaagctacttggagtgttatcagacagaccg
gccagcagagggcagtgtgcagacgatgggacctctgggtcgtgtcaaacaagacaaagc
gactggactgttcctgagattcccaagaccatatcagacatgttcgagagcagaaactgg
agcatggaaaacccatcacctctctgtgagtgcagctgtactgagaagaagaagatgctg
cctgattgtccaccaggagcaggaggtctgcctccacctcagatcaaagtcagcagcaca
aacacactgcagaacctcactgggaggaacatctccgactacctggtgaagacctacgca
cagattgtgggaaagagtttgaagaacaaactctgggtgaacgagttcagatatggagga
ttctcattgggtgccagaagttcacaagacctgccttcagatgagatctccaaggtcatc
tctcacatgcgaactcgcttcaacttggaaagaggcactgcagcagacaggtttctggga
gggttatcgagcttcatccatagtctggacaccaagaacaatgtcaagatctggttcaat
aataaaggctggcacagcatcgctgctttcctcaacgtgatgaacaacggtatcctgcgt
gccagccttcctgccaggctaaaccctgcgaaatttgctatcaaagcttttaaccacccc
ctgaacctgactaaagagcagctctctcaggtggccttgatgaccacctcagtcgatgtt
ctggtctccatctgcgtcatctttgccatgtccttcgtcccagctagctttgtggtcttc
ctcattcaggagagagtgaataaagccaagcacatgcagttcatcagtggagttcagcct
ttcctgtactggcttgctaactttgtgtgggatatgtgtaactacatcgtccctgcaacc
ctcgtcatcatcatcttcgtctgcttccagcaggaggcctatgtctcttccaccaacctg
cctgttcttgccctgcttttactcctttatggctggtccataactcctctgatgtatcca
gcgtcgttcttctttaagatccccagcacggcctacgtggtcctgaccagcgtcaacatc
ctcattggaatcaatggcagtgtgtccaccttcgtcttggagctttttggtggcaacgag
attggtggcataaatgacattttgaaaaatgtcttcctgatcttccctcacttctgcctg
ggacgtgggctgattgacatggtgaagaaccaggccatggctgatgctctggagagattt
ggcgagaatcggttccgttctcctctggcgtgggacatggtgggtaagaacctcttcgcc
atggcagtggaaggcgtggtcttcttctgcatcactgtgctcatacagtatcgcttctgc
atcaaggccagagacattaacgcacacctgaagccgatcagtgaggaagacgaagatgtg
gccagggagaggcaaaggattctgggtggaggtggacagagtgatatcttggagctcaga
cagctgaccaaggtctataagaggaagcagaagcccgcagtggaccgactgtgtgtggga
attccacgtggagagtgttttgggttgcttggtgtaaatggtgctggaaaaaccagtacc
ttcaagatgctcactggggattcggtcatcacgagcggagaggcttatttagctggcaag
agcgtgctgacggagatcgatgaggttcatcagaacatgggctactgccctcagtttgac
gctatcaacgacctgctgaccggccgagagcacctggagttttacgccattctacgtggc
gtcccggagaaggaagtgtgtgaggtggccgaatgggggatccataagctgggtctggtg
aagtacgcagacaaatctgcaggaagctacagtggaggaaacatgcgcaagctctccaca
gccatggctctgatcggaggcccacccatggtgttcctggacgaacctacaactggtatg
gatcctaaagcacgacgcgctctgtggaactgcatcctcagcatcatcaaggagggacgt
tctgtggttcttacctcacacagtatggaggagtgtgaggctctgtgcactcgcatggcc
atcatggtcaatggcaggtttcgttgccttggcagtgttcagcatctaaagaacaggttc
ggtgacggctacaccatcatcctgcgcgtggcaggttcggatcctcggctggagccggtg
atggagcttatcgagcacgagctaccaggcagcacgctgaaggagaaacacaggaacatg
ctgcagtaccagcttccatcgtcactgtcctcgctcgctcggatcttcagcatcctgtat
aagaacaaagatcagcttcacatcgaagactactccgtctcacagaccacgttagaccaa
gtatttgtcaatttcgccaaggaccaaagtgacgaggaccacatcaaagaccttctccta
aacaagagcgatgccgtggtggacttcacgcagctggacgcgttcctcgtgagcgccaaa
gcgcaggagacagtggtgtga
DBGET
integrated database retrieval system
