Tachysurus fulvidraco (yellow catfish): 113641495
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Entry
113641495 CDS
T08119
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113641495 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113641495 (chrne)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
113641495 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
FAM176
Motif
Other DBs
NCBI-GeneID:
113641495
NCBI-ProteinID:
XP_027000005
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Position
26:13437892..13443977
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AA seq
516 aa
AA seq
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MAAQSVWICSVVVALLYTVSQVSANEESEVIAHIFKNYNKNIRPARHPDDKVDVQVKLTL
TNLISLNEKEETLTTNVWIEIQWEDYRLSWNASEYYDIGVVRVPCTSVWLPDIVLENNID
GKFGVAYYANVLIDSRGGVYWLPPAIYRSTCTIEITYFPFDWQNCTLVFRSQTYSANEIN
IILAIDSETNKPIEWVDIDPEAFTENGEWAIKHRPARKLTNTRYSPEDLEYQEVYFNLII
QRKPLFYIINMILPCSLISSLVVLAYFMPAKAGGQKITVSISVLLAQTVFLFLIAQKIPE
TSLSVPLIGKYLIFVMSVTTLIVTNCIIVLNYSCRTPSTHSMSHKLKHMFLEVIPRFLGM
TPVDEGEEAGGMDGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSFVDAI
DVSTTASLYKSLAQAAPEIKECVDACNFIAESTREQNDIGSEMENWVLIGKMIDKVCFWA
AMLLFSIGTVAIFLMGHFNQVPEYPFSGENKKYAPE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccagtctgtttggatttgttcggttgtggttgcgcttctgtatacggtatcg
caagtcagtgcaaatgaagaatctgaggtcatagcacatatttttaagaattacaataag
aacatccgtccagcgaggcacccggatgacaaggttgatgttcaggtcaaactcaccctc
accaacctgatctccttgaatgagaaagaggagacgctgaccaccaatgtatggattgag
atccaatgggaagactatcgtctgtcgtggaacgcctcagagtactacgatatcggtgtt
gtccgtgtaccctgcacctctgtgtggctgccagatatagtgctggagaacaacattgat
ggaaaattcggtgttgcatattatgcaaatgtgttaatcgacagtcgtggcggtgtttac
tggttacccccagccatctaccgcagcacctgcactatagagatcacctacttcccattc
gactggcaaaactgtacgctggtcttcaggtctcagacatacagtgctaacgagatcaac
ataatcttggccatcgattctgagaccaacaagcccatcgaatgggtggatatcgacccc
gaggccttcactgaaaacggtgagtgggctatcaagcatcggccggcacgcaaacttacc
aacacacgctattccccagaagacttggagtaccaggaggtctacttcaacctcattatc
cagaggaaacccctcttctacatcatcaacatgattctgccctgctcactcatctcctca
cttgtcgtactggcctatttcatgcctgctaaggcgggaggacagaagataaccgtgtcc
atctccgtcctcctggctcagactgtcttcctctttctgatagctcagaagattccagaa
acttctctatctgtacctcttatcggaaagtacctgatcttcgttatgtctgtcacaacg
ctcattgtcacaaattgcatcatagttcttaactactcctgccggaccccgagcacacac
tccatgtcacacaaactcaaacatatgttcctggaggtgatccctcggttcctgggtatg
accccggttgacgagggagaggaagctggagggatggatggagtaagggagaggagacgc
agctcatttggtctgatgcagagggcggaagagtatgttttgaagcagccaaggagtgag
atgatgttcgacaagcagagagaaagacacggtcttacacgttcattcgtggacgctatc
gatgtgagcaccacggccagtctttataaaagtttggcacaagcagcaccagagattaaa
gagtgtgtggatgcctgcaacttcattgcagagagcacaagggaacagaatgacattggc
tctgaaatggagaactgggtgctgatcggcaagatgatcgataaagtctgcttctgggca
gccatgttgctcttttccatcggaacagtggccatcttcctcatgggtcatttcaaccag
gtgcctgagtaccctttctctggggagaataaaaaatatgctccagagtaa
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