Tachysurus fulvidraco (yellow catfish): 113641523
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Entry
113641523 CDS
T08119
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfd00535
]
113641523 (optc)
Proteoglycans [BR:
tfd00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
113641523 (optc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
113641523
NCBI-ProteinID:
XP_027000036
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All DBs
Position
2:12232672..12254978
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AA seq
325 aa
AA seq
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MAVYVVLAVALLGSCWAAPPIDSDLVNYDVDADTWDMNTYGESYDYDDLEEDVDNAGISF
EVGTMASPVAITHPHPADNPGNKTEEITLLPQTSTPTILPALDFQGTGLFGPDTGLGMPT
CLLCVCLGGSVYCDDADLIRIPPPPKDTTHFYARFNKITAVNAKDFLNLNLLKRIDLTGN
QISALDEDTFRSLPQLQELFLADNRIPSLPELPATMRHIDVRNNHLTSAGMHREGFKEMK
DLQFLYLSDNRLDYIPVPLPESLRVLHLQNNNIQSLNEDTFCNSHDRSYIRKALEDIRLD
GNPVDVNQYAQAYVCLPRVPVGNSH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtatgtagtgcttgccgtcgccctgcttggctcgtgttgggcagctcctcca
attgattcagatctggtgaattatgatgttgatgcagacacatgggacatgaacacatat
ggagaatcttatgactatgatgacttggaggaagatgttgacaatgcagggatttcgttt
gaggttggaaccatggcttctcctgttgccattactcatccacatcctgcagataatcct
ggaaacaaaactgaagaaataacactgctgccacagaccagcacacccacaatacttcct
gctctggacttccagggtactggactttttggccctgacactggtctgggaatgcccact
tgcttgctgtgtgtgtgcctcggtggtagtgtgtattgtgatgatgctgatttgatcagg
attccccctccacccaaagacactacacacttctatgctcgctttaacaagattactgcg
gtcaacgcaaaggactttcttaacctgaatctgttgaaacgaattgacctaacagggaat
cagatctccgcgctggatgaggacactttccgcagtctcccacagctccaggaactattt
ttagctgacaacagaatcccgtctctgcctgagcttccagccactatgaggcacatcgat
gtacgcaataaccatctgacgagtgccggcatgcacagagaaggctttaaggaaatgaaa
gatttgcagttcctgtacctgtcagacaaccgactagactacattcctgtcccgcttcct
gagagcttacgagtgcttcatctgcagaacaacaacatccaaagcttgaatgaagacacg
ttctgcaacagtcacgaccgaagctacatacgcaaggctctggaagacattagattggac
ggcaacccggtggatgtgaaccagtacgctcaggcttatgtctgcctgccaagagtgcct
gtgggaaactctcactga
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