Tachysurus fulvidraco (yellow catfish): 113641531
Help
Entry
113641531 CDS
T08119
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113641531 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113641531 (nfasca)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
L1 family
113641531 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_6
C2-set_2
Ig_5
V-set_CD47
BiPBP_C
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
113641531
NCBI-ProteinID:
XP_047665215
LinkDB
All DBs
Position
2:complement(11961818..12042723)
Genome browser
AA seq
1388 aa
AA seq
DB search
MWPQGQWAPLAVLSIIVLLWKEAALIDVPPDPRIQQDLKQPPTIVKQSAKDYIVDPRDNI
IIECEAKGNPVPTFWWRRNGKFFNVEKDPRVSMRKRSGTLEISFRNGGKPEDYEGEYQCF
SMNDFGTAISNKILLRVSKAPLWPKEVLEPVVVSEGSPLVLACNPPPGLPPPKTFWMDSR
MMPIAQDTRVSMGLNGDLYFSNVLSKDAATDYSCNARFLFTHTIQQKNPFTLKVQTKVPF
NDTVYSPNDTYTFVARNIQESTPTFLSPSGITSSKMVLRGEDLLLECIASGVPTPRIKWF
KKGAELPEKKVKFESFNKTIHIMSVSDEDSGGYICMASNKMGSIRHTISVEVKAAPFWLH
KPSNLVLAPNEDGQLQCLASGNPKPSIQWLVNGEPIDSTPENPSRKVNNDAIIFSSVQIG
TSAVYQCNASNEHGYLLANAFVHILDMPPRLLGPKNQLIKVIQNTTAFLDCPFFGSPFPV
LRWFKNGQGLVPNGGKYSLHDNGTLEIRQVRHEDQGTYSFVASNILGKAEDQVHLEVKEP
TRIVRSPEHLSANRGSVARFACKIKHDSTLPITVLWLKNDKPLQISWLSRYKKEEDLLTI
SNIQPDDGGTYTCTVTTELDQDSASARLTVLEDESLAPSKPSALAGPPDPPQDLELSDLS
ARSVRLTWIPGNENNSPVTQFLVQYEEDRWKPGDWQNLSSYAGDQNSVKLNLSPFVNYQF
RVIAINSVGQSRPSRPSARYQTSGERPYIFPTGLKGRGTTKSNMEITWQPLLDNQRNGPD
LRYVVSWKKKDLDEEWNYSTTTNTKHVVSDTDTYVPYEIKIQAVNDFGPGPESNIVIGYS
GEDRPTEAPGNLRVSKLNSTKGNVNWIPVDAKSINGEFKEYRLYYWREASLVKDLKVNKD
KKTKGFFSDVSQSSGVLEDLVPYSKYKMYITVANNKFEGPHSNTVEFHTKEGLPGAPKFF
KIVKRNTNTIHLQWNKPLEPNGILIGYTLLYKTVNGTQEGDVQVLSFFPNETEYTMRLPD
RFTRYKFYLSARTQVGSGEVYAEESPHFTNEEDFMTSGTDPTGVVIESTDAVVIATVLPP
FSQPTIPSTTITTSTTTTLVPTTDAIPTSPAPTTPTTTTTTTTTTTTTPSTTTSATTQPT
LPIMLAPHVKIWNLTVDANSDYANISWKHNLPVGSNAFVLESTLDSNGSTRKTVVFKNEP
PIKLPGLIAGAKYRLRVFSNDQPSVSSEYVTFETSGAYSTDQVDIATQGWFIGLMCAIAL
LILILLIVCFIKRSRGGKYPVRDKKDLPLDHVDHKDQDGSFDYQNENRSIERKSDEDNKP
LQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVRKDKEETEGNESSEATSP
VNAIYSLA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgcaggggcagtgggctcctctggctgtgctgtcaatcattgtgttgctgtgg
aaggaggcggctctcattgatgtccctccagacccaaggatccagcaggatttgaaacag
cctcctactattgtgaaacagtcagcaaaggactatattgtggatccccgagataacatc
atcattgagtgtgaagccaagggtaatcctgtaccaacgttttggtggagacgaaatggg
aagttcttcaatgtggagaaggatccacgtgtaagcatgcggaaacgctcaggtacactg
gagatcagctttaggaatggcggaaagcctgaggactacgagggagaataccagtgcttt
tctatgaatgactttggcactgccatatccaacaaaatattgctacgagtgtccaaggca
ccactgtggcctaaagaggttttggagccagtggtagttagtgaaggatcacctctggtt
ctggcctgtaacccacctcctggcctccccccacctaaaacattctggatggacagtaga
atgatgcctatagcacaggacacccgagtgtccatgggtctgaatggagatctttacttc
tctaatgtgctcagtaaggatgctgccactgactacagctgcaatgctcgatttctcttc
acacacactatccaacagaagaatccctttaccctcaaagtgcagacaaaggtacctttt
aatgacactgtatactctccaaacgacacttacacctttgtcgcacgcaacattcaagaa
tcaacccctacctttctctctccctcgggaataaccagctccaagatggtgcttcgtgga
gaggatcttctcctggagtgtatagcttcaggagttccaactccaagaatcaaatggttt
aaaaaaggagcggagttgccagagaaaaaggttaaatttgagagcttcaataaaaccatc
catataatgtctgtgtcagatgaggattctggaggctacatctgcatggccagtaataag
atgggcagcatccgccacactatctctgttgaggttaaagctgctcctttctggctacat
aagccatctaaccttgtgttagctcccaatgaggatggacaactgcagtgtttagctagt
ggaaaccccaagcccagcatccagtggcttgtaaacggagagccgatagatagtacacca
gaaaatccaagcaggaaggtgaataacgatgctataattttcagctctgttcaaattgga
accagcgctgtataccagtgcaatgcctcaaatgaacatggctacctcctggccaacgct
tttgtccacatacttgatatgcccccccggttattgggacccaagaaccagctgattaag
gtgattcagaacacaacagcttttctggattgccctttttttggctcaccttttccagtt
ttgcggtggtttaagaatggccagggtttagttccgaatggagggaagtacagcttgcat
gacaatggtaccctggagatcaggcaagttcgacatgaagaccagggaacttacagtttt
gtggcaagcaacattctgggcaaagctgaagatcaggtccatctggaagtcaaagagcca
acgagaattgtccgatctccagagcatctctctgccaatagaggaagtgttgctcgtttt
gcttgcaagattaaacacgattccacactccccattactgtcctctggctaaaaaatgac
aagcccctgcaaatttcttggctgagcaggtataagaaggaggaggacttgcttaccatt
agcaacattcagcctgacgatgggggaacatacacttgcacagtaactacagaattagac
caagattctgcctcggctcgccttactgttttagaggatgaatccctagctccctcaaaa
cctagtgccttagcaggtcctcctgatcctcctcaggatctagagctgtctgatctgtca
gcacgctcggtccggctcacctggatccccggcaatgagaacaacagtcctgttacacaa
ttccttgttcagtatgaggaagaccgctggaaaccaggcgattggcaaaatctgtcaagt
tatgcaggtgatcagaactctgtgaaactgaatctgtctccgtttgtgaactaccaattc
agagtgattgccatcaacagcgtgggtcaaagccggccgagccggccatcagcccgctat
cagaccagcggagaacgtccttatatttttcccactggccttaaagggaggggtaccaca
aaaagcaacatggagatcacttggcagcccctacttgataaccaaagaaatgggcctgac
ctgaggtatgtggtctcatggaagaagaaggatttggacgaggagtggaattacagcacc
actaccaataccaagcatgtggtcagtgatacagacacttatgtcccctatgagatcaag
atccaggctgtcaatgactttggacctggccctgagtcaaacatagttattggctactca
ggggaggacaggcctacagaggcacctggaaacctcagggtgtcaaagttaaacagcact
aaagggaatgtaaactggattcctgttgatgctaaatccattaatggggagtttaaagaa
tataggctatattactggcgagaagcaagcctggtaaaagacttaaaggtgaataaggac
aagaaaacaaaaggtttcttcagtgatgtgtctcagagcagtggtgtcctagaggatctg
gtcccttacagcaaatacaagatgtacataacggtggccaacaacaaatttgagggacca
cacagcaacactgtggaatttcataccaaggaaggcttgccaggggctcctaagttcttc
aagattgtcaagaggaacaccaacaccattcacctacagtggaataagcctctagagccc
aatggcattctgatcggatacacactcctatacaagacagtgaatgggacacaggagggt
gatgtacaagtcctgagtttcttccctaatgagacagagtacacaatgcgcctgcctgac
cgctttactcgctacaagttctacctgtctgctcggacacaggtcggctctggtgaggtt
tatgctgaggaatcaccacactttactaatgaagaagactttatgacttcaggtactgac
cctacaggtgtagtgatcgaatccacagatgccgtggtgattgcaactgttctccccccc
ttttcccaacctacaatcccaagtacaaccattacaacctcaacaactaccactcttgtc
cctacaactgatgccatccccacttctcctgctccaactactccaactaccacaactact
actacaactacaacaactaccactcccagtactaccacctccgctacaacccaacccacc
ctgcctatcatgctggccccgcatgtaaagatctggaatctgaccgtggatgctaacagt
gactatgcaaacatcagctggaagcacaacctcccggttggcagcaacgcatttgtgcta
gagtccacactggacagtaatgggtctactaggaaaactgtggtgttcaaaaatgaacca
ccaattaagctgcctgggttgatagctggagctaagtaccggctccgtgtgttttccaat
gaccagcccagcgtctccagcgagtatgtcaccttcgagaccagtggagcctacagtacg
gaccaagtcgacattgctacgcagggttggttcattggtctcatgtgtgccattgcgctc
ctcattcttatcctgctcattgtttgctttatcaaaagaagcagaggggggaaatatcca
gtgagagataaaaaagacctccctttggaccatgtggaccacaaagaccaggatggatca
tttgattaccagaacgaaaacaggtccattgaaagaaaaagtgatgaggacaacaagcct
ttgcagggaagtcagacctctctagacggcaatgtcaaggaaagtgacgacagtctagta
gactatggagaaggaggggatggccagttcaatgaggatggctctttcataggccagtac
acggtcaggaaggataaggaagagacggagggcaatgagagctcagaagccacatcacct
gtcaatgccatctattccctggcatag
DBGET
integrated database retrieval system
