Tachysurus fulvidraco (yellow catfish): 113641579
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Entry
113641579 CDS
T08119
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113641579 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113641579 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tfd04052
]
113641579 (csf1a)
Cytokines and neuropeptides [BR:
tfd04052
]
Cytokines
CSF and other factors
113641579 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Sha_B_N
Motif
Other DBs
NCBI-GeneID:
113641579
NCBI-ProteinID:
XP_027000168
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All DBs
Position
2:complement(12223657..12232474)
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AA seq
509 aa
AA seq
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MNTHTTVNKAKIRHLCSCLVLCLQLASGAVPGPCQYSVTEEHLLTLRKLIMNQVQSGCSI
SFKFTERQHLSDVCYIKAALPHILDLLLKHFTYENGSDNYYYTSSLKDLIHNIYSNKCVP
PVNEEIEENPVTFARLYWSLPREGLEKTEEVFQMYKKLMSENDKAVNWNCEDEYANNVLE
ATTVLPTQTTGTTECECSCPHTMKAFLFTTSAPAASPSSPHTQSGAYTFKNNYEEPSAPE
PADKVKTSNSTPNQISALSPFPGPLRLLTKPELIHEESTNFITSSTPNVMDNSSDSSVAM
GSDAQPVTSSPISSTSELTSITTGTDLLSATSQPSEKNNTPLISKRDPVLSKRSLDNRDQ
GMHSDSSPNLLWSWITKGIRVNKMVKVLEITPGETENQPVDHVEQNSPTQLHIHMDKSLL
GNVFKIISKDPNCKDSRCDKSTEDRSDQSSRGRVERHTGEKEYHLVHISVYSTFLITAAC
VLLLFITAVFYYKQQRIKNLQKEVRTLHL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacactacagtcaacaaggccaagataaggcatctgtgctcctgccttgtc
ctgtgcttgcaattggcctctggtgctgttcctggtccatgtcaatattctgtgactgag
gaacatctcctgactttaagaaaactgattatgaaccaagtccaaagtggctgctctata
tcctttaagtttaccgaacgccagcacctgagtgatgtctgttacattaaagcagcattg
cctcacatcctggaccttttgctcaaacacttcacatatgaaaatggttctgataactat
tactacacaagctcactaaaggacttgatccacaacatttattccaataaatgtgtccca
cctgttaatgaagaaatcgaggaaaatccagtgacgtttgccagactatactggtctttg
cccagggaaggtctagaaaaaacagaggaggtatttcagatgtacaaaaagctgatgagt
gaaaatgacaaagcagtgaactggaactgtgaggatgagtatgcgaataatgttttagaa
gccaccactgtgcttcccacccaaactacaggtaccacagagtgcgagtgctcttgtcct
cacactatgaaggcatttttgttcaccacatctgctccagctgcatccccatcatctccc
cacacccaatcaggagcgtacaccttcaagaacaactatgaagaacctagcgcacctgag
cctgcagacaaagttaaaacatcaaactcaactccaaatcagatttctgcactttcacca
tttcctggtcctttaagactgctcacaaaacctgaactcattcatgaggaatctacaaat
ttcattacttcttccactccaaatgtgatggataacagcagtgactcttctgtagcgatg
gggagtgatgcgcaaccagttacatcctctcccatatcatccacaagtgaattaacaagc
ataacaacaggaactgatctcttatcagcaacatcacagccatctgaaaaaaacaacaca
ccactaatttctaaaagggacccagtgctttccaagagatccttagataacagagatcaa
ggaatgcattctgattcctcccccaatctgctctggagctggattaccaaaggaattagg
gtgaataagatggtcaaagtcttagaaatcacaccgggagaaacagaaaaccagcctgtt
gatcatgttgaacagaacagtcctacacaactacatattcacatggacaagtccttacta
gggaatgtgtttaaaatcatcagcaaggatccaaactgcaaagattccagatgtgataag
agcactgaagacagatcagatcagagttccagaggccgtgtagagagacacactggggaa
aaagagtaccatcttgtgcacatctctgtgtattcaacattcctgattacagctgcttgt
gtattactgctgttcatcactgccgttttctactacaagcagcagcggatcaagaatcta
caaaaggaagtcaggactctacacctatga
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