Tachysurus fulvidraco (yellow catfish): 113641663
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Entry
113641663 CDS
T08119
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113641663 (kcmf1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113641663 (kcmf1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113641663 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
zf-C2H2
Di19_C
TFIIA
Zn_SUZ12
DUF6244
Borrelia_P83
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
113641663
NCBI-ProteinID:
XP_027000365
LinkDB
All DBs
Position
26:3769614..3784163
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AA seq
383 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETTTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNPSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNATRQRSNASNISASVPPPSTATNTAINESNPMASHSSQFLLTRLNE
PKMSEAERQALESERADRSLFVQELLLSTLMREESSSSDEDERRDFADFGAMGCVEIMPL
DVALESLNLKESSAGKEPPPPPL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgaaggtgtgagctgtgacgcgtgtttaaaagggaacttcagggggcgc
cgatacaagtgtttaatctgctacgactacgacctgtgtgcgtcgtgttacgaaagtgga
gccaccacaacacgacacaccaccgaacaccccatgcagtgcatactaaccagggtagac
ttcgatctgtattacggtggagaggcgttttcagtagagcagccccagtcgtttacttgt
ccctactgtggcaaaatgggttacacagaaacatctctacaggaacacgtaacctcggag
catgcagagacaaccacagaggtgatctgccccatatgtgcagctttgcccggaggcgac
cccaatcatgtgacggacgacttcgctgctcatctcacacttgaacacagagcaccaaga
gatttagatgagagcagcggggtgcggcacgtgcgccggatgtttcaccctgggcgtggg
ctcggcggccctcgggcacggaggactaacatgcactttaccagcagctccactgggggg
ctctcatcctcacaaagctcctcttactcccctagcaatcgggaagccatggaccctata
gcagagctgctgtctcagctgtcaggagttcggcgctcggcaggcggtcagctgaaccct
tcaggcccttcagcctcgcaactacagcagttgcagatgcagttgcaactcgagcggcag
caggcgcaggcggcacgtcagcaactggaaacggcacgcaacgccacgcgccagcgcagc
aacgcgagcaacatcagcgccagcgtgccaccacctagcactgcaacaaacacagccata
aacgagagtaacccgatggcctcccacagctcccagttcctcctcacacggttgaacgag
ccaaagatgtctgaggcggagcgtcaggctctggaaagcgagcgtgccgaccggagcctg
ttcgtgcaggagctgctgctgtcgacgctgatgcgcgaggagagctcctcctccgacgag
gacgagcggcgagacttcgcagacttcggcgccatgggctgcgtggagatcatgcccttg
gacgtggcgctggagagcctcaacctgaaggaaagctctgcaggcaaagagcctccacct
cctcctctttga
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