Tachysurus fulvidraco (yellow catfish): 113641811
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Entry
113641811 CDS
T08119
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X2
KO
K08739
DNA mismatch repair protein MLH3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113641811 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113641811 (mlh3)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113641811 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113641811
NCBI-ProteinID:
XP_027000626
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Position
23:4302440..4310528
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AA seq
1140 aa
AA seq
DB search
MIKSLSKEVQSQLRSGVAIFSLQQCVEELLLNSIDAGATCVAVQIDIEACKIQVLDNGSG
MDRDNMERVGIRYSTSKCRSIEDLENLCFYGFRGEAIASMATMSAMVEITSRTKTSVKTF
VKRFYEGKQSDVFEAQITRPSAGTTVLICNFFHNMPVRRKRMDSVLEVERVRQRVEAISL
MHPSVSFTVKRDGSGTLLVQLSKARNTYYRFVQIHGLNRAQKLGELNYSFGHFEMTGHVG
REGHYNKSLQFLFVNRRLLLKTRLHKLLNCLLRRLSNVQNSNPNVPTVVSSPKQKSSADL
HGVYIINIKCPYSEYDVCLEPAKTLIEFRNWDSVLLGIEEGINAFLTKENLVSECSMSDV
QNFTNKESNSGWKVNIEDAGRLAVDEVTDRRQDEEMPEPEQSDSKTNSDSDPEKDVVKND
AVEKPLQDMFENCPDTQCTERDDSISPLCVKNKDFRIAAIDHKVAHDSLRCFIEPSLSHA
PKRKLTLLSAQNHTAYSCDYETKIARVTPHRKLTLSFETSSLDKFKRMFGKEVELKPLTM
NTQIPDVLCRTDSLGGSALNASNNLVCSESMHVEDVRVDHFLPGENSVFKKSQCSSADKR
NRISLATKLFWKVEREDKKNTQTDETNHGTQDSDSRPNSLSVQLNDIFSNPSLIADNSIT
TEPHEYDQSDEPTFTAPKGQEISTSTSASSTTEDSELTKNTTSPKLQNPQGQIVDPASQH
DLLPSKTGNEEQAANENRGQESDEVTPGSSDWLTHYDYSLGKMVYINPVTGLSKYADPSL
KETQVPCSTNLTNMAVSVVSKTGFEYRCYPFQTDLVLPFLPKPRAERVCSTIENGGPGSL
STLYSEWNNPVFVRPPQVALDVTSGQADGFAVKVHNILFPYRFTKEMIHSMKVIHQVDKK
FLACLINTAGVNTTEPSKDEGNLLVLVDQHAAHERVRLEGLVTESHEDDPDTPGKKRLCG
SIVSPPLEIHVTEDEIRLLRLYQLSLRDLALEISFPQTEQPCVLVERLPTCFVEKENTEK
RRGRRSVIKSIAEEYIREHIEALRSTGRVKSTLPLSVHNVLASQACHGAIKFNDVLSKEE
CCSLVASLSSCQLPFQCAHGRPSILPLADLLHLEDGQDRPKPNLRKLRRMYKAWQLYGNN
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaagtctttcgaaagaagttcaatcacagctgcgctctggagttgctattttc
tcattacagcaatgtgtcgaggagcttctgctgaacagtatcgatgccggagcaacgtgt
gtggctgtgcagatcgacatagaggcctgcaaaattcaggttctagacaatggctcaggc
atggaccgagacaacatggaaagggtcgggatcagatattcaacaagtaaatgcaggtct
attgaggatttggaaaatctttgcttttatgggttcagaggagaagcgattgcgagcatg
gcgacgatgtcagccatggtcgaaatcacctctcggaccaagacgtccgtgaaaacgttt
gttaaaaggttttacgaaggtaagcagtcagatgtttttgaggctcagattactcgcccg
tcagctgggacgacggtgctcatttgtaacttctttcacaacatgccagtcaggagaaaa
aggatggactctgtgctggaggttgaacgtgttcgtcagagagtggaggcaatatcgctg
atgcatccgtctgtgtcatttactgtgaaaagagacggctctggcacacttcttgtacag
cttagcaaagccaggaatacttactacaggtttgttcagatccatggtctgaatagagcc
caaaagcttggcgagctgaattactcttttggacactttgaaatgacggggcacgttggc
cgagaaggacactacaataaaagcctgcagttcctcttcgtaaacagacgacttctttta
aaaacacgtcttcacaaactactcaactgcctccttaggagactgagtaatgtccaaaac
agcaatccaaatgttcccactgttgtctcaagccctaaacaaaaaagcagtgctgattta
catggagtctatatcattaatatcaagtgtccatattcagagtatgatgtatgtctggag
cctgcgaagacccttatagaattcagaaactgggatagcgtgctcttgggcatcgaagaa
ggcataaatgcatttcttacaaaggagaacttagtatcagagtgttctatgagtgacgtc
caaaactttacgaacaaggaaagcaattctggatggaaggtaaatattgaagatgcagga
aggttagcagttgatgaagtaacagacaggcggcaagatgaggagatgcctgagcctgag
caatcagattctaaaacgaattcagattcagaccctgaaaaagatgttgtgaaaaatgat
gcagtcgaaaagcctttgcaggacatgtttgaaaattgtccagacacacaatgcactgag
agggatgacagtatctcaccactctgtgttaaaaacaaagattttaggattgctgccatt
gaccataaagtggcacatgacagtttaaggtgtttcattgaaccaagcctgagccatgca
ccgaagagaaagctgacattactcagtgctcagaatcacacggcatacagctgtgactac
gaaacaaagatcgccagggtcactccgcatcgcaaattaacactgtcttttgaaactagt
tctcttgacaaattcaagaggatgtttggaaaggaggttgaactgaaacccctaacaatg
aacacacaaatcccggatgttttatgtcgaacagactctttgggcggttctgctttgaac
gcaagcaataatttagtctgttctgaaagtatgcatgtagaagatgtgagagtggatcac
tttttgcctggagagaattctgtatttaagaagtcacaatgttcctcagcagacaagagg
aacagaatatcattagcgaccaagctcttttggaaagtagaacgcgaagataagaaaaat
actcaaaccgatgaaactaaccatggaacacaagattcagactctagacccaattctctg
tcagttcaattaaatgacattttttcaaatcccagccttatagctgacaactccataacg
actgaaccgcatgagtatgaccaatcagatgaacccacattcactgctcccaaaggacag
gaaatatcaacaagcacctctgcgtcatccaccactgaagactccgagctcactaaaaat
acgacttcccctaaactccagaacccccaaggtcaaatagttgacccggcatcacaacat
gacctactgccctcaaaaacaggaaacgaggaacaggctgcaaatgaaaaccggggccag
gagagtgatgaggtgacgcccggatcaagcgactggctgacacattacgattattcatta
ggaaagatggtgtacatcaatccagtgacaggactcagtaaatatgcggatccatcactg
aaggagactcaagtcccgtgttctacaaacctcaccaacatggcggtcagtgttgtttca
aagacaggatttgagtacagatgctaccctttccaaacagaccttgtattgccctttctc
cccaaacctagagcagagagagtctgtagcacgatagaaaacggaggtcctggttccctg
tcgactctgtactctgagtggaataaccctgtgtttgttcgaccacctcaggttgccttg
gacgtgacaagcggccaagccgacggttttgccgtgaaagtccacaacattctcttcccc
tatcgcttcacaaaggaaatgatccactcaatgaaggttattcatcaagtagacaagaaa
tttctcgcctgtctcattaatactgcaggcgtaaatacaacagagcctagtaaagatgaa
ggaaacctacttgtactagtcgatcaacatgcagctcacgaaagagttcgcttggagggg
ctcgtgacagagtctcatgaggacgacccagacacaccgggaaaaaagagactgtgcggc
tcgattgtaagtcctccactggagatccacgtgaccgaggatgaaatacgactgctgagg
ctgtatcagctttccctaagagacctggctctagaaatcagcttccctcagacggagcag
ccgtgtgtgctcgtggagcgactccccacgtgcttcgtagagaaagagaacacagaaaag
cggcgtgggagacgtagtgtcatcaagtctatcgcagaggaatacatacgagagcacatt
gaggcactgagatcaaccggaagagtaaaaagcactttgcctttatcagtccacaatgtc
cttgcttcgcaggcttgtcatggagcaattaagttcaatgatgtcctgagtaaagaggag
tgctgcagtctggtggcgtcgctctcatcttgtcagctgcccttccagtgtgctcatgga
cgaccctccattcttcctctagctgatcttctccacttagaggatggacaggaccgcccc
aaaccaaatctcaggaaattgagaagaatgtacaaggcatggcaactttatggaaataat
taa
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