Tachysurus fulvidraco (yellow catfish): 113641847
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Entry
113641847 CDS
T08119
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X6
KO
K27704
microtubule cross-linking factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113641847 (soga1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113641847 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Striatin
TPR_MLP1_2
TSC22
Motif
Other DBs
NCBI-GeneID:
113641847
NCBI-ProteinID:
XP_027000703
LinkDB
All DBs
Position
23:complement(8327186..8372375)
Genome browser
AA seq
1766 aa
AA seq
DB search
MTKTKVDAASSTHFVSAKDKRLRSKMETESGRETSDVVQSITQEKKKPHRAPSPARPKDV
PGWSITKIRGGIGTPTLSVKPGAIHLGSRLSRRSPISSKETKDKMGKSPGKSALSALGAT
KSSVKSNKAARRKVSDASNASDDLSKDSGKDSGKLSPTDSSSELSDCGSEENKLSTSSDR
ESSSRGGGTESESAAAEQSTAGAGRYGERLALGGDAGQDSTSPGDERSLTSLDSRMPAST
SLAFSDLNEDLTEAMHEEYLREIEELRSENDYLKDEVEELRSEMLEMRDMYMEEDVYQLQ
ELRQQLEQTNKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHN
ELDTVEKKRSRLEQENEELQVKLQDLEVAKQVLQAELEKSRENSLKKRGPRPNHKPDKKT
SPQPPEDNSDLKCQLHFAKEESALMCKKLAKMVKDNEAMKEELTKYRSVYGDIDTSLTVD
EVADSPHTREAEVRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQETSGGLAVG
TGVGQLLISPSVENVMEMQRHLQFVEEEADLLRRSLIEMEEQNKLLMNELNRYKSELPPD
SDNESLSPSTILPPSITTGVAASEEGSLNEASQEELLGARLQISDLSSKVKKLQYENRIL
LSNLQRCDLASRHVDIRLALETDAEAGDSAECVPSPDCNDSPIDGEEIQPLEEKSEKVTG
NNHSDQCLNIKELLAIRDQAQLITSAIQLLMSADSNCLLAFSSDTILHKITAREPGEAGL
LEKNQVQNSNLTLVEAVHSRLQSLQAQLLALSQRIEVLGETPDYEHVKGLSTFALVSQSA
EPSPVDTQVNQITVQQKPKIRDQADVKCQAAHLCKADESNISTDRHKEQVTDLPDTNCAL
LLEQVCELQTQLCEAKEKAKKTQEDLGLENLAHHDYTQSYSQKLSQLQEEHKKVLVQRDF
QLQSMSLQTRLQQKFWSQEKNVLVQESQQLKQILLLVSLKLRWLLKQWRLGKKFDAEVKD
MLQINSIKELHHPLEDDGVAPHHGDNKMAASKEQPPSPTKKDRSLSDNNLQQASGLSTTL
SDLKVALQDLSTELREERQSSQELTQQFARAKASWEVERTELKSLITQLEGKAGKMSATG
TDMDPPDLKAALKRECEEHQNLLADSYAAVMDLTKQLQISERNWSREKLELLEHFNQERN
QWEQRLLDAQSKSPSAKGISTDATTNETTLQRTQLISSLSDLESLLDVSSFLPDHEVNGI
AEVKAGKHQFNDLVTRTDLRDLNQKNWKYLSSESASLEKTEPFKTWDCPSTGIPELKLSM
EHVQRSYTAPDKTGIRIYYSPPTVRRMERKVKDLSLNDTQLGLKFFDAPNSDQAILPPTT
QTSPSHLSASYEQWLSSLSQQHRDLLEGRTGSSGALHTLEISANLSDDMKEMTNCVRQAI
RSSSLERKSSKDAGSQTVGFTSTGTQTAKFVSVGLQTESPASSTSRGAGFHGKIWSPRPS
TSLTSARSRQISSSLEKVHGRIDRPCCSPKYGSPKLTRRVSASSSSSKLETSSTSSRDRS
MWNLPNRSIAQSGSAWARSTTTRDSPVLSGLNDGLSSLFSVVEHTSSMESLCRGDTCPGR
QAAGKPSCPSVGIMLGDSGTQKYGIVQEFFQNVCVQTLSGEKTGAIDEPKPECLSGALMG
TDSVTKIVNKRFMRQTLRDEAVVSGKESAAGASSPEDSSCDCKSQSPTSCLARSSRTTVR
GAHSQCKHRVQETALGNEERLDVSNE
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaaggttgacgccgcgtcttcgactcatttcgtctcggctaaagacaag
agactcaggagcaaaatggaaacggaaagcgggcgtgaaacaagcgacgttgtgcagtca
ataacccaggagaagaagaaaccgcaccgcgctccttcgcctgcgagacccaaagacgtg
cccggatggtccatcaccaagatccggggggggatcggtacaccgaccctcagtgtgaag
ccgggggcgatccatttaggtagccgcctgtccagacgcagccccattagcagtaaagaa
acaaaggataagatgggaaaatcaccggggaaatccgccctgtctgcgctcggtgctacg
aagagtagcgtcaagtcaaacaaggccgcgcggaggaaagtatcagatgccagtaacgcg
tccgacgatctgagcaaagactcaggaaaagattcgggtaaactctcgcccactgacagc
agctccgagctctccgactgcggctcggaggaaaataagctttcaacaagcagcgataga
gaaagcagcagccgtggcggtggaaccgagagcgaaagcgcggccgcggaacagagcact
gctggtgccgggaggtacggagagcgcctcgcgctgggaggagacgcgggacaggacagc
acttccccgggggatgagcgctcactcacatcgctcgatagtcggatgcctgctagcacg
tctttggccttttctgatcttaacgaggacctaacggaagcaatgcacgaggaatatctc
agagagatcgaagaactaagatcagaaaacgactatttaaaggatgaggttgaggagctt
cgctcagagatgctggagatgagagacatgtacatggaggaggatgtataccagctccag
gaacttaggcagcaacttgagcagaccaataagacatgtcgcatcctccagtatcgactg
cggaaggctgagagacgcagcctgcgtgtcgctcaaaccggccaggtagacggagagctc
attcgtaccctggaacaagatgtaaaggtggccaaggacgtgtccatccgcttgcacaat
gagcttgacactgtggagaagaagaggagtcgacttgaacaggagaatgaggagctgcaa
gtgaagctccaggacctggaggtggccaagcaagtccttcaggctgagctggagaagagc
cgagagaactctctaaaaaagcgaggtccaaggccaaaccacaaacccgataagaagaca
tcaccacagcctccagaggataattctgacctgaagtgccagctccattttgccaaggag
gagtcagcacttatgtgcaagaaactcgccaagatggtgaaagacaatgaggcgatgaag
gaagaactgaccaaatatcgttcagtctatggcgacatagatacctcactgactgttgat
gaggtggctgactcgccccacacacgtgaagccgaggttcgagttcacctaaagttggtt
gaagaggaagctaacttgctgagtcgacggatagtggagctggaggtggagaatcgtggt
cttcgtgctgaaatggatgacatgaagattcaggagacctctggaggtcttgcagttggg
acaggagttggacagctgctaatttcaccttcagttgagaatgttatggagatgcagcgg
cacctgcagtttgtagaagaagaagcagatctgctgagaaggtcacttattgagatggag
gagcagaacaaactcctgatgaatgaacttaatcggtacaagtcagaacttcctcctgat
tctgataatgaatccttgtcaccttccaccatccttcctccatccatcactactggagtg
gcagcttctgaagaaggatctttaaatgaagcgtcacaagaagagctcctgggagccagg
cttcaaatcagtgacctgagcagtaaagtaaaaaagctccagtatgagaatcgcattttg
ctgtccaacctccagcgctgcgacctggcttccagacatgtggacattcggcttgccctg
gaaactgatgcagaggctggggactcggctgagtgtgtgcccagcccagattgtaacgat
agccctattgatggtgaagaaattcagcctctggaggaaaagagtgagaaagtgacagga
aataaccattctgatcagtgcctcaacatcaaagaactcttggccattcgtgaccaggcc
caattaattacctcagcaatccagctcctcatgtctgctgattccaactgtcttttagcc
ttctcttcagacacaatcttacataaaataacagctagggaacctggagaagctgggttg
ctggaaaagaaccaagtgcaaaattctaatctgactctagttgaggctgttcacagtagg
cttcagtctctgcaggcccagctgctggctctcagtcagaggatagaggttcttggggag
acccctgactatgagcatgtgaaggggctgtcgacatttgccctagtctctcagtcagca
gagccaagccctgtagatactcaggtcaatcagatcaccgttcaacagaagcccaaaatt
agggaccaagcagatgtcaagtgtcaagctgcacacctgtgcaaagctgatgagagcaac
atcagtacagacagacacaaagaacaagtgacagacttgccggacaccaactgtgcactg
cttctggagcaggtttgtgagcttcagactcagctgtgtgaggcaaaggagaaggctaag
aaaactcaggaggatctaggactggagaatctagctcatcatgattacacacaatcctac
tcccagaaactctctcagctgcaggaggagcacaagaaggtgctggtgcaacgggatttt
cagctgcaaagcatgagcctgcaaacacggctgcagcagaaattctggagccaggaaaag
aacgtcttggtgcaggagtcccagcagcttaaacagatcctactgcttgtcagcctcaag
ttacgttggctgctcaagcagtggaggctgggcaagaagtttgatgcagaggtcaaagac
atgttgcagattaatagtattaaggagcttcaccaccctcttgaggacgatggtgttgcc
cctcaccatggagacaataagatggcagcctccaaggaacagccaccaagtcccacaaag
aaagatcgcagccttagtgataataaccttcagcaggctagtggtttgagtacgactttg
tctgacctgaaggtggctcttcaggatctgagcactgagctgcgagaggagcgccaaagc
tctcaggagctaacgcagcagtttgcccgagctaaggcctcctgggaggtggagcgcact
gagctcaaaagtctcatcacccagctggaggggaaggcagggaagatgtctgcaactggt
actgacatggatcctccagatctgaaggcagctttgaaaagggagtgtgaagagcaccaa
aatctgctggcagactcctatgctgcagtgatggatctgaccaagcagttacagataagt
gagagaaactggagcagggagaagctggagcttctggaacatttcaatcaggagaggaac
cagtgggagcagaggcttcttgatgcccagagcaagtctcccagtgccaagggaatatct
acagatgcaacgacaaatgaaacaacattgcaaagaacccaactaatttcctcattgtca
gaccttgagagtttgctggacgtcagttctttccttccagatcatgaggtcaatggaatt
gctgaggtgaaggccggaaagcaccaatttaacgatcttgtaacccgcacagaccttaga
gacctcaaccagaagaactggaagtatctaagtagtgagtcagcttctctggagaagact
gagccttttaaaacctgggactgccccagcactggcattccagagctaaagctgagtatg
gagcatgtgcaaaggagttacactgccccagacaaaacaggtatccgaatatactacagc
cctccaactgtccggaggatggaaaggaaggtcaaggatctgagcttaaatgatacccag
ctgggactaaaatttttcgatgcacctaactcagaccaagcaatactgcctccaacaaca
caaacatcaccttcacacttgtcagcctcatatgagcagtggctaagctcactatcccag
cagcatagagacctacttgagggcaggacaggcagctctggggccctccacacccttgag
atttctgcaaatctgagtgatgacatgaaggagatgaccaattgtgtgcggcaggccatt
cgttctagctctcttgagaggaaatccagcaaagatgcaggaagtcagactgtgggcttc
accagcacaggaacacagacagctaaatttgtcagcgtgggcctgcagacggagagtcca
gcctcctcaacctcccgaggagcaggatttcatgggaagatatggtctccccgcccatcc
acctccctcacttcagcacgatcacgccagatctcctcatcactggagaaggtgcacggt
cgcattgaccgaccctgctgctcaccaaaatatggctcacccaagctcacaagacgggtc
tctgcttcatcttcatcctccaagctggagacatcttccacctcctcaagagatcggagt
atgtggaatctgccaaaccgtagcattgcccagagcggatctgcatgggctcggtccacc
acgacccgcgatagtcccgtactcagtggcctcaatgatggactatccagcctcttcagc
gttgtggagcacacctccagcatggagtcactctgtaggggtgacacatgccctggaaga
caagctgctggcaagccatcttgtcccagtgtcggcattatgcttggtgattctggcact
cagaagtatggcattgtgcaggagttctttcaaaatgtgtgtgtgcagacactgtcagga
gagaagactggagccatagatgagcccaagcctgagtgtctttctggtgctctgatggga
acagacagtgtcactaagattgtcaataaaaggttcatgagacagacattgcgggatgaa
gcagtagtcagtgggaaggagtctgctgcaggcgccagtagcccagaggattcatcttgt
gactgcaaatcacagtcccccacctcttgtcttgctcgctcctctcgcaccactgttcgt
ggagcccacagccagtgcaagcaccgtgttcaggagactgccttgggaaatgaggagaga
ttggatgtcagcaatgagtga
DBGET
integrated database retrieval system