Tachysurus fulvidraco (yellow catfish): 113641958
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Entry
113641958 CDS
T08119
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113641958
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113641958
04082 Neuroactive ligand signaling
113641958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113641958
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113641958
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113641958
NCBI-ProteinID:
XP_027000970
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Position
3:22984355..23053511
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AA seq
1948 aa
AA seq
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MVTVPALPLLLALVEWVGPAVSSPHLLLRPRERERDQVAPMHFNIAVIHAGSVAQDEAGV
TAAGGRVLYPGFGRVHSSFGESVVTKWGYVNVIWLQVNDSSPRSLLSQLCDLLASRPVQG
LVYEDERPLPLASGPLSPMLEFVSAQTGLPIVAVGGGAGLGRVPQESGSIFLQFSTSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSMVEGLTDGSFIGWEKKSVVMLNLTDDPG
GVRTRRLLKENEAQVRLLYCSQEEAEQVFHAAWAAGQAGASHMWFAVGPALSELGVNGLP
SRLFAVKPQGWRDEPRKRIARGVSVLIHGAMALRQDYGATSGPHFVTNCQTDGNRTQRIR
GRMKYFSNITMSGKDYSFNNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRYPAWSR
YGPFLQPPDDAQHLRVVTLEERPFVIVELADQASGTCIRDSVPCRRPLNATAHQEGVTPV
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVDKRADMAIGSL
TINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLQNGKKAGGSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMVL
VWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEK
NIRSNYPDMHHYMIKYNQKGVEEAITNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMNRMGQAGKLDFLLAFSRGMYSCC
SFEDETAQGGPKVIIPTHHHTSVVSAPPSSHIVTAGVTNQAIAMVPQQQQQQQQHPPQPP
QTYKTPLPGSPPSVVHSGGSLGPSTTPLLGAPLPCSTFLPRPDRRLAVVDRWRLPKTASA
TTPMNLRGGISDMGTFPQKLVPTWAGSGPAGSTLDGYKRYYGPIDPEGLGPCMDQQAGTQ
TPKSAPRNHQQPPPATLAFYQEKGMDHGVGKKVGVCTGGGGQGKGVKSLGTPRLPPKSQT
PAPLPPNPPLQHPSPPLPSSLWRKRRPKKTKESGGPLYENILPLGRRGGGRDIGRRPRPS
PPLPIPLPVTLSPSYTPPSPSLSLPYTSTSSSTSSTSSSTTSSASSSRSTSPSTTSSTTS
RSTRDREEEEEEDLDELTEESSLLQGHNRHNNMPERSILSPRSLTHGPPPPPVPPRKPRG
SFGEREREREGNRLRERGGSQLAQLQEWWAGWGERERERNGVGSGDTERKREKRHRKERE
REKKKKKKNKKRKKREERERERERKRRKVKKKKKKVMKAKKKKKASIGKHSEPDEGDVEV
EREGEGDGEREGEYATFSNQYRSTFGEKGSLLGWEGERERENRDGGEDVGDEQDEESGGG
RNRVRRAKSSHSRHRPSSKRYPNLHKLPTSVKFWVSGGGTEASGGSPPSSLHNILPSTKR
RRSSGAERDMAGRGGERRPLLLHYERGRAHTREGLSFHEWDSEDEEQDDEAEEEQEREQE
RVRVEGRLRRAGGRGAVSESERDRVRADESYSDDGSSGEFGQFERYWEGNGAEGASGIGG
GGWFFGTYPAREKGGSINSRDDSVLGRNEGWSGDFWGSGAGVGWGSGGGSGGLGSQWPPP
PTSLPPPRRYWSVDKLPMKSEKRGHSRSKSKGKRAREREQDMGSCSYSQISHSRVPCRSK
RGSATSHSQEELLPHCHSLNAGSRPKLPPKPDGAKSGSQSNLSTQQAQHPEPASSPTQSL
LPSLPASSAPSSLPVPIPQPTSSASMSPPPVLSPGTTKGASASAKLQYQRLRSVPQPRRF
YSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagtacctgccctgcctctcctgttggccctggtggaatgggttgggccagct
gtctcctcccctcacctcttgctccgcccccgagagcgtgagcgagaccaggtggcaccg
atgcacttcaacattgcagtgatccatgcaggctccgtggctcaggacgaggcgggagtg
acagcggccggaggcagggtcctgtatccaggctttggccgagtgcacagcagcttcggg
gagagtgttgtcaccaagtggggctatgttaatgtcatctggcttcaggtgaatgacagt
agtcccaggagccttctctcccaactgtgtgacctactggcatccagacctgtgcagggg
ctggtgtacgaggatgagagacccctcccactggcttcgggcccactgtctcccatgctg
gaattcgtctcggcccagactggccttcctattgtggctgtcggagggggagcaggactg
ggcagagtgccacaggagagcggctctatcttcctgcagtttagcacctccactgctctc
caattggaagtgatctttgaggtgctcgaggagtacgattggacagcattttctgtggtt
tccacacgtcaccatggctaccaagacttcctgtctatggtcgagggtttgacagatggc
tcctttattggctgggagaagaagagtgtggtgatgctgaatttaaccgatgacccaggc
ggagttcgcacacgcagactgctgaaggagaacgaggcgcaggtccgactgctgtactgc
tcccaggaggaggccgagcaggtgtttcacgcagcgtgggctgctgggcaggctggtgca
tctcatatgtggtttgctgtcggcccggcgctgtctgagttgggtgtgaatggcctgccc
agccgcctttttgctgtgaagcctcagggctggcgagatgaaccacgcaaacgtattgcc
cggggtgtttctgtccttatacatggagccatggccctgcgccaagactacggtgctacc
agtgggccgcactttgtcacaaactgccagacagatggcaacagaactcagaggattcga
ggaagaatgaagtatttcagtaacatcaccatgagtgggaaggattactcttttaataac
gagggctatctggccaacccctttctggacgtcatctcctacacacctgggagtggctgg
gaagacgtaggatggtgggaaaacggtgtgctgcgtttgcgatacccagcctggtctcga
tacggccccttcctgcagcctcctgatgatgcacagcacctgagggtggtgaccctggag
gagaggccattcgtcattgtggaactggctgaccaagcttcaggaacctgcatcagggat
tctgtgccctgccgacgacctctcaatgccacggctcatcaggaaggggtgactcctgtg
aaacagtgctgcaaaggcttctgcatcgacatcctcaagcgtttggccaagattgtgggc
ttcacttatgacctctacctggtcaccaatggaaagcacgggaaaaagatcgatggtgtg
tggaacggcatggttggagaggtggtcgataagcgtgcggacatggctatcggctccctc
accatcaatgaggagaggtcagaggtcattgacttctcagtgccctttgtggagacagga
atcagcgtcatggtctcccgtagtaatggcacagtctcaccctctgccttccttgagcca
tacagtcctgcagtttgggtgatgatgttcgttatgtgcctgactgtggtagcagtgact
gtctttatctttgaattttttagtccagttggatataaccgcagcctgcagaacggcaag
aaagcaggaggttctaagttcactataggaaagtccatctggctgctgtgggctttggtc
ttcaataattctgtgcccgtggagaaccccaaaggaaccaccagtaagatcatggtgctc
gtctgggctttctttgctgtaatctttcttgccagctatacagctaacttggcggccttc
atgatccaagaggaatacattgacactgtgtctggcctcagtgacaagaagtttcagcac
cctactgaacaatacccgcccctgaagtttggaacggtcccgaatggcagcacagagaag
aacattcgcagtaattaccccgacatgcaccactacatgattaaatacaaccagaaagga
gtggaagaggccatcaccaacctgaagacgggtaagctagatgcatttatctatgatgcc
gcagtgctcaactacatggctcgtaaggacgagggctgtaaagtgatgactataggctct
ggtaaagtgtttgccactacaggctatggcattgccctcattaagaactcccgctggaag
cgaccactggacttggcactgctgcagctggtgggcgatgatgaaattgagatgctggaa
cgtctctggctttcagggatatgccacaatgataaaattgaagtgatgagctcaaagctg
gacattgacaatatggctggagtattttacatgttgctggtggccatgggcttgagtctg
ctggtgtttgcctgggagcatcttgtctattggagactccgccattgcatgaacagaatg
ggccaagctggaaaactggactttctacttgccttcagcaggggaatgtatagttgttgc
agttttgaggatgaaactgcccaaggtggacccaaagtcatcatacccacccaccatcat
acctctgtggtgtcagcccctccctcatcccatattgtcacagcaggtgtcaccaatcag
gccattgccatggtgccacagcaacagcagcagcaacaacaacacccacctcagcctcca
cagacctataagaccccccttcctgggtcccctccttcggtggtacattctgggggatct
ttgggaccctctaccacgccacttctaggcgcccctctcccatgctccacatttctgccc
cgacctgaccgcagactggctgttgtggaccgctggagactgcccaaaactgccagtgcc
accacgcccatgaatctcagagggggcatatctgacatggggaccttcccacaaaagtta
gttcctacatgggcagggagtggacctgctggaagcactttggatggatacaagcgctat
tatggccccattgaccctgaaggcttgggaccatgtatggaccaacaggcaggcacccag
actccaaaatcagctcccaggaaccatcagcaacccccaccagctaccttagctttctac
caggagaagggcatggaccatggggtggggaagaaggtgggagtgtgtactggtggaggg
ggtcaggggaagggggtgaagtctttgggcactcctaggctaccacctaaaagtcagact
ccagccccactgccacctaaccccccactacagcacccctctcctcctcttccctcatcc
ctttggaggaagcggaggcccaaaaaaacaaaagagtctggtggcccactgtatgaaaac
attctgcccctaggccggagaggaggtggaagggacataggtcgaaggcccagaccttcg
ccccctcttcctattccattacctgtaacactttccccatcatacacaccaccatcgccc
tcactctctcttccttatacctctacgtcctcctctacctctagcaccagttcctctact
acatcttctgcctcttcttctcgatccacctctccctcaaccacctccagcactacctca
cgcagcaccagggatagggaggaagaggaagaagaagacttagatgagctgacagaggag
tccagtcttctgcagggacacaaccgacataacaatatgcctgagcgctccatcctgtcc
cccagatctcttacacatggtccaccaccaccccctgtacccccacgcaagccccgtggt
tcatttggagagcgtgagcgagagagagaaggcaacagattgagggagagaggtggcagt
cagcttgctcagcttcaggagtggtgggcaggatggggggaaagagagagagagcgaaac
ggggtaggatctggtgacactgaacggaaaagggagaaaaggcacaggaaagaaagagag
agagagaaaaagaaaaagaaaaaaaacaaaaagaggaaaaagagagaagaacgggaaaga
gagagggagcgtaaacggcggaaggtgaagaagaaaaagaaaaaggttatgaaggcaaag
aagaagaagaaggcatccattggaaagcattcagagccagatgaaggtgatgtagaggta
gagagagagggagagggtgacggagaaagagagggagagtacgccaccttttcaaaccag
taccggagcacatttggagaaaagggaagtctcttaggttgggaaggagagagagagcga
gagaacagagatggaggggaggatgtgggagatgaacaagatgaggagagtggtggaggt
cggaatagagtaaggcgggcaaagagtagccattcacgccacagaccatctagcaagaga
tacccaaatctccacaaacttcctacttctgttaaattctgggtcagtggaggtggtaca
gaggcatctggaggttcacctccctcctcattacataatattcttccatcaaccaagcga
aggaggagcagtggagcagagcgagatatggctgggaggggtggtgagcgtcgaccattg
ctcctacactatgagaggggccgggcacacacccgagaggggctgtccttccatgaatgg
gactctgaggatgaagagcaagatgatgaagcagaggaggaacaggaaagggagcaagaa
agggtaagagtggagggaagattgagaagggcagggggaagaggggctgtgtctgagtct
gagagggatcgtgttagagcagatgagagttattctgatgatgggtcatcaggggagttt
ggtcagtttgaaaggtattgggagggcaatggggcagaaggggcaagcggaattggaggt
gggggttggttttttggcacctaccctgcccgagagaaagggggaagcattaacagcagg
gatgattctgtattaggtcgaaatgaaggttggagtggagacttttggggctcaggagca
ggggttgggtggggctctgggggtggaagtgggggacttggctcacagtggccacctcct
ccaacatcactaccacctcctcgaaggtactggtcagttgataagctgccaatgaaaagt
gagaaacgaggtcacagtaggtcaaagagcaaaggaaagagggctcgagagagggagcag
gatatgggatcgtgttcgtactcacagattagccacagcagagtgccctgtcggtctaaa
aggggcagtgccacctcccacagtcaggaggaactgctgccccactgccacagtctaaat
gcaggctcccgacccaaacttccccccaaacctgatggtgccaaatctggcagtcagtcc
aacctcagcacccagcaagctcaacatccagagccagcatcctcccctacccaatcctta
ctgccctcactccctgcaagctctgcaccttcctctcttcctgtgcccattccacaaccc
acttcttctgcatccatgtctcccccaccggtattgtcgcctggtaccacaaaaggggct
agtgctagtgctaaacttcaataccagagactacgctctgtgccacagcccagacgcttc
tactctccccacctgccccttaaagcaaaaagtctgtgctcacgacgtggctctgcccac
ttttccagccttgaaagcgaagtatga
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