Tachysurus fulvidraco (yellow catfish): 113642155
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Entry
113642155 CDS
T08119
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113642155 (cicb)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113642155 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
113642155
NCBI-ProteinID:
XP_047666710
LinkDB
All DBs
Position
3:complement(24109756..24153025)
Genome browser
AA seq
2552 aa
AA seq
DB search
MRSLKKPKGRSNLSTRAKSVRKRGDKHDRQSQTTPAAVSPQKNITSKLDSSEGKTVKRSN
TPNKEGLKGQIKGLSVEVDQAEQIVVRVNKMTASENTSLKTQNITMTNSITNNPLSTNIP
ANSSNKSITNHSPITLSSRKTATFKARVPKKKYMYEHGTVSTSPVSPPVPPLALNSNHLS
KICNPINPNSHLVANNVVTDADNIMSANINSNVLADNKTTTEASTLNCLDRGEVVKDELP
CMRKDTVEQVKTDEFGDAAPNSACSSSTETASENFPDLEVVEPFNVHQSLGTTLNRPKSP
LTRALSLPPNLTQNNHKLEQESFLEIAEALVKGLKNQRVLARHQRTKDNIEGEDPIKECV
FIRGVVRGATKEQLNVELQINGEEMQLLLPFHTLVNHPDKTTDLILDAPPPGNDPVEVGT
RVCVPYGEDKGKEWYREGVVSQMDSHPAVACPYRVLLHEEKNHKDAGNKRDEGQQRTGVQ
AVWVSRQNLRLLVPPWEGDVQEREERERREDVDVEREMCQLSRGMTIGGIKPPQKTTDIG
GQQYEGTPTSSSASSPAIMMSNSALIIVTGRDSQVSKDTDRDRARERERERKQLQTPEVD
LEVLRLNLAPLQDAVGTLVSGVPKTVRHSHHRQIISKPSGYSSPISVVRGLAGTSLGTHL
TGPLSGSPQPPASSAFVGTDGLHLQTHPSTVPPSPSSKGLLTILDKSSTASQNSAPIPGS
SASSSASSSRSRTPLSAAQQIYKKGDVVCTPNGIRKKFNGKQWRRLCSKDSCMKESQRRG
YCSRHLSMRTKEIEGSVGERELKRGGGSSSGTATPSDLRGRTSSEFDWEETSRDSSETSS
RGTDSRPRLVLPSLLPQDFSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPAPS
PAPSPLFGFRPANFSPITTLTVLPPRRHRQTSGTCSSKLSTLMAEKDREKLAPGIVPSFQ
TSLTFTVPVSPNKHKSDTSQPTALVMQDCTKLEVDNNTGDLSLGTSFHVLSSQTTTFSHC
KRPTSSTASSLPPSPLTLESGSQRTLSQQILHDSPVIVRNPEVPLAKFADCPLVKVADKE
GTNSKHDNLTGVLPGVGLQMPVPINAAASNNGAVLLHSPSTTLVLVSSISSLPNPNPTSL
TTQSSPAISCISVPSPAPESASFGSGERDHGKGGITKLQQPVPCHPAPTALLPLLLPAET
LHPVPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSTQPGEGQQPVNHSQ
AGTLKKESQGGPVVKEVVEGASNLALRPVPSIDDLPPERERERETEKERPDSETESDVDD
PFLPGVLPDPPVSASPGKRRSQSLSALPKDDKNSPGKREKDHIRRPMNAFMIFSKRHRAL
VHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKS
SSESRNAPGGKDVRERSMSETTEPPAVSVSSELKGMGPGVVGVSERAGGERLARPRAFSQ
SAMHSLERSERSNPQVLAELAQICGDGGQFSSRGGAVSHVQRGVSEDMTSDEERMVICEE
EGDDDVIEDPYPASSIDLKCKEKVTDSDSENGSGDEGERKRIFAPVICSSASGPGHGRSV
SLSSYPSSKHSSDSSIKRKRVIEGGEGEQRDGDCGASDCLSLSSSGQSISVSTSSALGAA
RVASTIVTNVVRPVVSTPVTIASKSGQDRKTTTPQAQLLIGSGVAGSGVTLAPSGGGGHH
SSSLQSSVTAPGRQGGLSLVLGGAFQAPSAVQLITPPPSQNQATPATVTPTQSNGPAPLP
LLQPHILPTASPAPSAGQKAVTQVQYILPTFSANNPKSPSPQQPSQATSIFTLPTAPPTH
ASGANGKQTGYSPGPAVGMVNPGARVQTQSPVLQGKMLVPMATVRTTPAPSQQFPLMAPP
LPVQNGAQSGNKIIQIAPMPVVQSSIPTAGSSFPVTMAAATVVAPPGSTPSQAVLLPPPP
TRITYVQSTPGAPSPIPLVSTATGSTSQTASPAPGSAYVQSPLATFAAIAHSGQTLVQPL
ISGQPPLLAPPQSPNPAITAIYPSTSVTLATGVVSAATVPPGVVYTVSSPSILPKHTSST
SVTHTSLSAPDRPGHGSAHAELDRQTDKLPVSHTDRLTKVGSSSTAPPPGAPLSLQPASP
AQPPLSAAISKLSPGPARPPQKVKATVANIPVGCYDGGGRGKEREKDREKEKERERGKEK
ESSSCFSFEVDKSGEVTPAANTSLDDSSSEAEAHNPGEAGSTSTRSKEANAKEAEWKDST
SSSPLSLSAPEPQSDKDTPLPKKLKSRPPPLKRPFDSVDKVLSEVFFEERFAELPEFRPE
EVLPSPTLQSLATSPRAILGSYRRKRKNSTGERDLDSSTDDPISPKRKSRRRSSCSSEPN
TPKSAAKCEGDIFTFDRPGTDGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFF
PSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAAPAESIGTSDPASLPGPSAIEG
GGGSESAEAMRDEEQNNSEEPRNAGDSLDSTR
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgagatcactcaagaaaccgaaaggacgctctaacctgtccacacgggcaaagagtgtg
aggaaaagaggagataagcatgacagacaatcacaaactacacctgctgcagtgtcaccc
cagaaaaatattacatccaagttggacagctctgaagggaagacagtcaaaaggagcaat
actccaaacaaggaagggctaaaagggcagataaaaggactatctgtggaagtagatcaa
gctgagcaaatagtagtgagggtcaataaaatgaccgcttctgaaaacactagcttaaaa
acgcagaatattaccatgacaaacagtataaccaacaacccactgagcactaacatacca
gccaacagctcaaacaaaagcatcaccaatcatagtcccatcacactgtctagtaggaaa
acagctaccttcaaagccagagtgcccaagaaaaagtatatgtatgaacacggaactgtc
agcacctctccagtcagtcctcctgtacctccacttgctcttaatagcaatcacctcagt
aaaatctgtaaccccattaatcctaatagccaccttgtagccaataatgttgtaacagat
gcagacaatattatgtctgccaacataaatagcaacgttttagcagacaataaaacaacc
acagaagcctcaacactcaattgtctggataggggagaagttgtcaaagatgaacttcca
tgtatgagaaaagacacagttgagcaagtgaaaaccgatgaatttggagatgctgcccca
aactcagcttgctcatcatcgactgaaacagccagtgagaactttccagatctggaggtg
gtggagccttttaatgtgcatcaaagtttaggaactaccttaaacagaccaaaaagccca
ctaaccagagcactatccctgcctccaaaccttacccaaaacaaccataaacttgagcag
gaaagctttttagaaatagctgaggcactggttaaaggccttaagaatcaaagagtgcta
gcacgtcatcagagaacaaaggataatatagaaggagaagatccaataaaagaatgtgtc
ttcatacgtggtgtggtgcgtggggctactaaagagcagctcaatgtagaattgcagatt
aatggggaggagatgcaacttttgctcccgtttcatacattggtaaatcacccagacaaa
actactgacctcattttagatgcccctccaccaggcaacgatccagtggaagtcgggaca
cgtgtttgtgtgccttatggagaagataaagggaaggaatggtatagggaaggtgtagtg
tcacagatggactcgcatccagctgttgcttgcccttacagagtgctactacatgaagag
aaaaatcacaaggatgcagggaacaaacgagatgaggggcaacaaagaactggtgttcag
gctgtgtgggtatcacgacagaacctgcgccttcttgtcccaccatgggaaggagacgtg
caagagagagaagaaagagagagaagggaagatgtggatgtagaaagagagatgtgtcaa
cttagtaggggaatgactataggaggtataaagccaccacagaagactactgatattggt
ggtcaacagtatgagggcacacccacttcttcatctgcatcctcgccagcaattatgatg
tcaaacagtgcactaatcatagtaactggaagagacagtcaagtgtctaaggacacagat
agagacagagcaagagaaagagagagagaaagaaagcagctacagactccagaggttgac
ttggaagttttaaggcttaacctggcacctcttcaagatgcagtaggtactttggtttct
ggagtacccaaaacagttagacacagccaccacagacaaatcatttcaaagccttctgga
tattcaagtcccatttcagttgtccgaggtcttgctggcacttccttgggaacccacctg
actggtcctctatcaggcagcccacagcccccggcttcttcagcttttgttggaactgat
ggacttcatttgcagacccacccttcaactgtgcctccctcacctagctcaaaaggtttg
cttacaatcttggataaaagctccactgcttcacagaattctgctcctatcccagggagt
tctgcttcctcctcagcttcctcctctcgatcacgaactccactttctgcagctcagcaa
atatataagaaaggtgacgtggtgtgcacacccaatggtatacgcaagaaatttaatgga
aagcagtggcgtcgtttgtgttcgaaggatagctgcatgaaagagtcacaacgtaggggc
tactgctctcgacatctctcaatgcgcactaaagagattgaaggatcagtaggagagaga
gagctaaagagaggtggagggagcagttcaggtactgcaaccccttcagacttgcggggc
aggactagcagtgagtttgactgggaggagacatcacgggacagtagtgaaaccagcagt
cggggaactgactcacgaccacgtcttgttcttccatcacttctgccacaggatttttca
cgttttgactttgatgaatgtgaggctgctactatgctcgtgtctttggggagctcacgt
tcagggacaccttcattttctcctatatcaaaccagtcacctttctctccagctccctct
cccgccccttctccactttttggtttccgtcctgccaacttcagccctattacaacttta
acagtcttacctcctcgtcgccaccgacaaacaagtggtacttgcagctccaagcttagt
accttaatggcagagaaagatagggaaaaacttgcacctggcattgtaccatctttccaa
accagcttaacgtttactgtacctgtaagtcctaacaaacataaatcagatacctcacaa
cccacagctcttgttatgcaggattgcactaaacttgaagtggacaacaacacaggagat
ctctccttaggaacttcctttcatgtactttcttctcagacaaccactttttctcactgc
aaaaggcccacctcatccacagcttcttcactaccaccttctcctttaaccttagaatca
gggtcacaacgtacactctctcaacagatactgcatgactctcctgtaattgtacgaaat
cctgaggttcctctagcaaaatttgctgattgtcccctggtaaaggttgcagataaggag
ggaacaaactctaagcatgacaacttgactggcgttctccctggtgtagggttacagatg
cctgttccaattaacgctgcagcatctaataatggggcagtattattacatagcccttca
acaactttggttctggtgtcttccatctcttcccttccaaaccccaaccctacaagtctc
accactcaatccagccctgccatatcctgcatatcggtgccaagtcctgctcctgagtct
gcttcctttggatcaggagaacgagatcatggaaagggaggaataacaaaattacagcaa
ccagttccatgtcatcctgccccaacggctttattgccacttttacttcctgcagagaca
ttacacccagtaccctgcaaggacataattatgggacgtccaggaaccgtgtggactaat
gtggagcctcgctcggttccagtgtttccttggcattcgttggtgccatttctggcacct
acccaatcagatccatcgacacagcctggtgagggccagcagcctgtcaatcattctcaa
gctggcactcttaagaaagagtcccagggtggaccggtggtgaaggaggtcgtcgaggga
gcatcaaaccttgctttgcgacctgttccctctatcgatgatcttcccccagagagagaa
agagagcgggagacagagaaagagagaccagacagtgaaacggagagcgatgttgatgat
ccgtttttaccaggtgtcctcccagacccaccagtctcagcatctcccgggaaacgccgt
tctcagtctctgagcgcactgcctaaagatgacaagaacagccctggcaagcgggagaag
gatcacatccggaggcccatgaatgccttcatgatcttcagcaagcgccaccgtgctctc
gttcaccagcggcaccctaatcaggacaaccgcactgttagcaagatcctgggagagtgg
tggtacgctttgggacccaaagaaaaacagaaatatcacgacctagctttccaggtgaag
gaagcacactttaaggcacatcctgactggaagtggtgtaataaggacaggaagaagtcg
agcagcgagagtcggaacgcaccaggtggaaaagatgtcagagagagaagcatgtcggag
acaacagagcctccggctgtttctgtgagttcggagcttaaagggatggggccgggtgtg
gtaggagtatcagagcgcgctggaggggagaggcttgcacgccctcgtgccttctcgcag
agtgctatgcacagcttagagagaagtgagaggagtaaccctcaggtgctagcagagctt
gcacagatatgtggagatgggggccagttttcaagccgtgggggagcagtgtctcatgtc
cagaggggtgtgagtgaagatatgaccagtgatgaggagcgcatggtgatctgtgaagag
gagggggatgatgatgtcattgaggacccttatcctgccagctccatagacttgaagtgt
aaggagaaggtgacagacagtgacagtgaaaatggatctggggacgaaggtgaacgcaag
agaatctttgctcctgtgatctgctcgtcggcgtcagggcccggtcacggacggagcgta
tctctctcctcctacccttcctccaaacactcctcagactcttccatcaagaggaagcgt
gtgatagagggaggagagggagagcaacgggacggtgactgtggtgcgtctgactgtctt
tccctgtcttcctctggccagtccatttcagtcagcacatcttcagctttgggagcagcg
agagtagcatctactattgtcactaacgtggtacgtccggtcgtcagtacaccagtgaca
atcgctagcaaatcaggccaagacagaaaaaccaccactcctcaggcgcagctgcttatt
ggatctggggtggcaggaagtggggtaactttggcaccatcaggagggggtgggcaccat
tcttcttctttgcagagttctgtaactgcacctggacgtcaagggggattaagtctagta
ttgggaggtgcattccaggcaccatctgcagtgcagcttatcacaccccctccttctcaa
aatcaagcaacccctgccacagtaactccaacacagagtaatggccctgcacctctgcca
ctgctgcagcctcacatcctgcctacagcatcacctgcaccctctgcaggccaaaaagca
gtcacacaagtacagtacatcctgcccactttctctgccaacaatcccaagagcccctcc
cctcagcagcccagccaggcaaccagtatcttcaccctgcctacagctccgcctacacat
gcttcaggggcaaatgggaagcagactggatatagccctggccctgcagtaggcatggtc
aatccaggagctagagtgcaaacacagtccccagtcttacagggcaagatgcttgttccc
atggcaactgtgcggaccactcctgccccttctcagcagtttcccttgatggcacctcct
cttcctgtgcagaatggagctcagtcaggaaacaagatcatccagattgcccccatgccc
gttgtgcagtcttcgattcctacagcggggagttcattccctgtaaccatggcagcagcc
acagttgttgcccccccaggctctaccccctcacaagctgtgcttctgccacccccaccc
acaagaatcacttatgtccagtccactccaggagccccctcccctatcccgctcgtatct
actgcgacaggctccacctcccaaacggcctccccagcacctggatctgcatatgtgcag
tctcctttggccacctttgcagcaattgctcattcgggacagactttagtgcagccactt
atttccggtcaacctcctttgttagcaccaccccagtctcccaacccagccattacagcc
atctacccctctacctctgtcaccctggcgacaggggtggtgtctgcagcaacggtacca
cccggtgtggtttatacggtctcaagcccctccatccttccaaaacacacttccagcact
tctgttacgcatacatccctgtcagcccccgacaggccgggtcacggttctgctcatgct
gagctggacagacagacagataaactgcctgtctctcacactgacagactgactaaagtt
ggcagcagctcaacggctccaccgcctggtgcgccgttgtctctacagcctgccagtcca
gctcagccaccactttctgctgccatttctaaactttccccgggacctgctaggcctccg
cagaaggtcaaggccacggtggcaaacatcccagtcggctgctacgatggaggagggaga
ggaaaagagagagaaaaagacagggagaaagagaaagagagggaacgtgggaaggagaaa
gaaagcagcagctgtttctcttttgaggtggataaatcaggagaagtgactcccgctgct
aacacctcactagatgacagctcttcagaagcagaagcccataaccccggtgaagcaggt
tccacaagcacacgcagcaaagaggccaatgctaaagaggctgaatggaaagactctact
tcctcttctccgttatctctgtcggcgccagagcctcagtcggacaaagatacccctctt
cctaaaaagcttaagtcccgcccaccaccactgaagcgcccgtttgattcggttgacaaa
gtcctgtcagaggtcttctttgaggaacgatttgctgagctgccagagtttcgtcccgag
gaggtgcttccctcgccgaccttgcagagcctggccacttctccacgcgccattctgggc
agctaccgcagaaagaggaagaactccaccggtgagagagatttagactcctccacagat
gaccccatctccccaaagagaaagagccggcgtaggtctagctgcagctcagaaccaaac
acccctaaaagcgctgccaagtgtgagggtgatatatttacctttgacaggccaggtacc
gatggggaggacattttgggggaactggagttcgataaggtgccatactcctctctgaga
agaactctggatcagaggagagcacttgtcatgcagctattccaggaacacggtttcttc
ccttcggcccaagccactgctgcattccaggcacgatattcggatatcttcccaaccaag
gtgtgcttgcagttgaagatccgtgaggtccgccaaaagatcatgcaaacggctgcgcct
gccgaaagcatagggacttctgaccctgcctctttacccggcccttcagccatcgaggga
ggaggcgggtccgagtctgcagaggcgatgcgagacgaggagcaaaacaactctgaggag
cccaggaacgcaggcgattcactggactccaccagatga
DBGET
integrated database retrieval system
