Tachysurus fulvidraco (yellow catfish): 113642252
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Entry
113642252 CDS
T08119
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113642252
04137 Mitophagy - animal
113642252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113642252
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113642252
Protein recycling
Other Rab GTPase associated proteins
113642252
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Motif
Other DBs
NCBI-GeneID:
113642252
NCBI-ProteinID:
XP_027001372
LinkDB
All DBs
Position
9:13949809..13956839
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AA seq
435 aa
AA seq
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MWAEQKRGIHVTQDELLCKDGCGFYGNPAWQGYCSKCWRKRTRTAETIKEDHGLPDGHSQ
VNLSKTEEKKNARRSNSLMRLFWGSSSPPQQESPEGEDVALKAFQSLEPGDFPGFLKLLR
KPPAQRLQSRCTTFLNTIEAYHNLPVQKQSDLVQDFYQSISIHFDGLSEPQVSQMMEHVE
KLIMTRLHKWVFCHDSCDDEQKDLTLQKRIKSLNWVTPEMLRVPFPQGGSDSSDPYLPAI
TAIIEMDAKRAPQDKLVCLSKCSQHVFQALASESRQPANADDFLSALIYVVLRANPPRLH
SNINYIVRFGLPHSLMAGESGYYFTNLSCTVAFIEKLDGPALNLTPEEFNSYMQGRRASA
VPVENTGQRRAQENREQLEKLKTRQDKVEQDARAFQEQLDSWVRSVQGQIDEVRAQSVLV
LKDVGAESQPGKTVR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccgagcagaagcgagggatccacgtcacacaggatgagctgctctgcaaagat
ggctgtgggttttatggcaatccggcctggcagggatattgttccaaatgctggagaaag
aggacacgcacggctgaaaccatcaaagaggatcatgggcttcctgatggacattcccag
gttaatttgtctaaaacagaagagaagaaaaatgctagacgctccaactctcttatgcga
ctcttctggggcagttcttcaccaccacagcaagagtcacctgaaggtgaggatgtagcc
ctaaaggccttccagagcctggagcctggcgatttccctggattcctcaaacttctgcgc
aagccgcccgctcaacgtcttcaatcacgctgcacaaccttcctcaacacaatcgaggct
taccataacctgcctgtacagaaacagtcagacctggtgcaggatttctaccagagtatt
tctattcacttcgatggtctgtcggagccacaggtttctcagatgatggaacatgtcgag
aagttgattatgactcgtctccacaagtgggtgttctgccatgatagctgtgatgacgaa
cagaaggatctaacactccagaaaagaatcaagtctttgaactgggtcactcctgagatg
ctgcgtgtgccttttccacagggaggctcggacagcagtgacccgtatttacctgcaatt
acagccatcatagagatggatgctaagcgtgcgcctcaggacaaactggtttgtctgtcc
aagtgcagtcagcatgttttccaagctctcgcctcagagagccggcagccggcaaacgcg
gatgacttcttgtctgctcttatttatgtcgtgctgcgggccaacccaccccgtctgcac
tctaacataaactacattgtccgctttggtctgccacacagcctgatggcaggggagagt
ggttactacttcaccaacctgtcatgcactgttgcctttattgagaagttggacggccca
gctcttaacctcactccggaggagtttaacagctacatgcagggccgaagagcatcggct
gtgccagtcgaaaacaccggccaaaggagagcccaggaaaaccgagagcaactggaaaaa
ctgaagacccggcaagataaggtcgaacaagacgcacgtgcttttcaggagcagctggat
tcgtgggtacgttctgtgcagggccaaatagatgaagtcagggctcagtcagtgttggtc
ctaaaggatgtcggagctgaatctcagcccggaaaaaccgtgcgctga
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