Tachysurus fulvidraco (yellow catfish): 113642299
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Entry
113642299 CDS
T08119
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113642299 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113642299 (usp39)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
113642299 (usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113642299
NCBI-ProteinID:
XP_027001484
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Position
9:14172124..14179929
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AA seq
498 aa
AA seq
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MADIKRERDIDIEEEDEEVRVKVARTHDTEDKRSRHCPYLDTINRSVLDFDFEKLCSISL
SHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLED
ITYVLKPTFTKQHIANLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALCNVPP
LRNYFLEEENYREIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KTFQITKQGDAVDFLSWFLNALHGALGGTKKKPSIVTKVFQGSMRIFSKKLPHPDLPPEE
KEALLHKEEYQEEMLESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKE
YKTYKENFLKRFQLTRLPPYLIFYIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQ
ATEKNTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYI
QIWKRQMVDDDGDSHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggatattaaacgggagcgagatatcgacattgaagaagaagatgaagaggtgcga
gtaaaagtggcccgtactcatgacaccgaagacaagagaagccgacactgtccctacctc
gacaccatcaacaggagtgttttggactttgattttgagaaactgtgctcaatctccctc
tcgcacattaacgtctatgcctgtctcatctgtgggaaatatttccaaggcagaggtcta
aagtctcatgcctacacccacagtgttcagttcactcatcacgtcttcttaaatcttcac
accctcaagttctactgtctaccggataactatgagatcattgactcatctcttgaggat
atcacttatgtgctgaagccaacgttcaccaaacagcacattgctaatctagataagcat
gggaagctgtacagggcctatgatggcacgacgtacctccctggtattgtgggcctcaat
aatataaaggccaatgactatgccaacgtggtcctgcaggctctgtgcaacgtgccacct
cttcgtaattacttcttagaggaagaaaactaccgcgagatccggcggcctcccggtgac
atcatgttcctgctggtgcagcgcttcggcgagctcatgcgcaagctctggaacccacgc
aactttaaggcccacgtctcgccacacgaaatgctgcaggctgtggtgctttgcagtaag
aagaccttccagatcaccaagcaaggggatgctgtcgactttctctcatggtttctaaac
gcactgcatggagctctaggtggaaccaagaagaaaccatctattgtcacaaaggtcttc
caggggtccatgcgtatcttctcaaagaaacttcctcaccctgatctgcctccagaggag
aaagaagcgctgctgcataaagaggaatatcaggaggagatgctggagtccacatttctc
tacctcacccttgatctacctacagcaccactctataaagatgagaaagagcagctgatc
atccctcaggttcctctcttcaacattctgggcaagttcaacggtaacacggagaaggag
tacaaaacctacaaagaaaacttcctcaaaaggttccagttaacccgactccctccgtac
ctcatcttctacatcaagcgattcaccaagaataacttttttgttgagaagaatcccacc
atcgtcaatttccccatcactaatgttgacctgcgtgagtatctaacagaagaggcccag
gctacagagaaaaacacaacctacgacttggtagccaacgtagtgcatgatgggaagcct
acagaaggatcctacagaatccatgtcctgcatcatggcaccgggaagtggtacgaactc
caagacctgcaggtaaccgatatcctgcctcagatgatcacgctgtctgaagcatacatc
cagatctggaagagacaaatggtggatgatgatggagacagccatacaggagcgtga
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