Tachysurus fulvidraco (yellow catfish): 113642392
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Entry
113642392 CDS
T08119
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6 isoform X1
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113642392
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113642392
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Flavi_capsid
DUF2703
Motif
Other DBs
NCBI-GeneID:
113642392
NCBI-ProteinID:
XP_027001640
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Position
4:24681477..24698339
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AA seq
1019 aa
AA seq
DB search
MFYCWGDSSKGQLALPATGVKVTPTSVRLTEQLIQISCGEHHTLFLTPSGQVLSCGRNSK
GQLGRSKSRDTKLPVKIEGLGSVAAIACGQEHSLALCDSGQVFSWGAGGEGQLGLRSPVA
KCLKPMLYQIPFQIQVVQVACGNFHSLALTKGGEVFSWGLNKYGQLGLGKSVDLQPLPAL
ITSLVGVPVIQISAGGEHTMVLTLTDQVFCCGANSVGQLGLNRKDEKGRFTICAVPALRN
FGVSSISCGAAHTAVLTKVGEVYTFGEGAHGQLGHNSTNNQLLPKKVEGIDAPAKQVTCG
SHHTLVLMPSGMLFTFGRDTQAQASGGTGNSLQPVRLDGDWISSGAGIPTSTQGSKMQIS
SGYSSNFLFFPTSKTNILGEPIGKLEEAQVQRWLTTLDCERSIKEMKKEVSLTFATSSNL
VACFIKDRNTPGTLQVDVNAASQTFDQLLKIPWIKNSVNFTQIVDVLLYAAKSMRCPEVF
LILPTCSILHEHQNVIGLVLPLAVAITFLNENAMNTLKERWSSMDVNIMTKHIRMWKQAL
AFLLSSNVWINYQPGIKAVLEVLKLLYKANKKAKKSRRIPFSEFYIEEMGTTPQLLESDV
LIWMDIRSGLVKEEDEPSAIFCLYPFLLDLTSKISVFKYIATAIQLGHRIIHNNVVAGGV
FRNMHCEVPTPILQLKVRRTALLEDTFRQLNNADHENFKKTLVVKFVEEDRLTDVNRRDF
FLHAFNELLAPKSGMFIYNDNQTMIWFPAKPTLELKQYFLFGILCGLALCSNNIVHMPFP
LAFYKKLVNVKPTLDDMTEFTPVIGKGLHCILHEYPDDVVDDLDISFCVHWDGDYVELES
HENGQSVTSCNKKKFVEAYVDYAMNKSVERVFNEFKRGFYKVCIEDVVNFFQPEELRGVM
VGTEEYDWDTFKQNTTYFGQYHERHPTIIAFWEVFEELTQEQKKAFLLFLTGCDRVPVLG
MDQVRMTVLERPNFTQNHLPESLTCHSHFMLPPYESKQRLEAKLLEAINHNRGFWIEDV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttctactgctggggagactcatccaaaggacagctcgctttacccgctactggggta
aaagttacaccgacttcagtacgtttgactgaacaactcattcagatctcttgtggagaa
catcacactttattcctgacaccaagcggtcaagtactctcatgtggccgaaactctaaa
ggacagctggggagatccaagagcagagacaccaaactgccagtgaagattgaaggtttg
ggctctgtagctgcaatagcatgtggacaggaacacagtttggctctatgtgattcaggt
caagtgttttcttggggagcaggtggagaaggtcagctgggcctccgcagcccggtagca
aaatgtctcaaacctatgctatatcagataccttttcagatccaagtggtacaggtggct
tgtggaaatttccattctttggccctaaccaagggaggtgaagtcttttcatggggtctg
aataaatatgggcagctgggactggggaaatcagtggatctgcagcctctccctgctctg
ataacatctcttgtcggagttccagttattcagatctcagctggtggagaacacactatg
gtgttgaccctcacagatcaagtgttctgctgtggcgctaacagtgtaggccaacttggt
cttaacaggaaagacgaaaaaggtcgatttacaatatgtgctgttccagctttgaggaac
ttcggggtttcttccatcagctgtggagcagctcacactgctgtcctcactaaggttgga
gaggtgtacacattcggagagggagctcatggtcaacttgggcataactccaccaataac
cagcttctacccaagaaagttgaaggaattgatgcacctgctaaacaagtaacctgtggc
agccatcacactttggttctgatgccatctggtatgctcttcacgtttggccgtgatacc
caagctcaggcgagtggtggcactgggaacagcctgcagccagtaagactggatggagac
tggatcagctcaggagcagggatacccacaagtacacaaggatccaaaatgcagatatca
tctggctacagttctaactttcttttctttccaacatccaagaccaatattcttggtgag
ccaattgggaaacttgaagaggcccaagtgcagagatggcttacaacgttggactgtgaa
agaagcatcaaagaaatgaaaaaggaggtttccttgacgtttgccacaagttcaaatctt
gttgcctgcttcataaaggacaggaatactccaggtactcttcaggttgatgtgaatgct
gctagccagacttttgaccaactcctgaagattccctggatcaagaattcagtgaacttc
acacaaatcgtggatgtccttttgtatgctgctaaatcgatgaggtgtcctgaagtcttc
ctgattctgcctacatgctccattcttcatgaacatcaaaatgtcattggactggtgctg
ccattagctgtagccatcacattcctcaatgagaatgctatgaacaccttgaaggaacgc
tggtcctcaatggatgtcaacattatgaccaaacacatccgcatgtggaaacaagcactc
gccttcctcctgagttccaatgtgtggatcaattatcaacctggtataaaagcagtgctg
gaagtcctcaagttactttacaaggcaaacaaaaaggcgaagaagtcgaggaggattcct
tttagtgagttctacatagaagagatgggcaccacacctcagctactcgaatctgatgtt
ttgatatggatggacattaggtctggactagttaaggaagaggatgaaccatctgccatt
ttctgcctctacccatttctcctggacctgacaagcaaaatcagcgtttttaaatacatc
gctacagctatccagttgggtcatcggattatccacaataatgtggtggctggtggagtc
tttcgaaatatgcactgtgaggtcccgacaccgatcctccagctgaaagtgagacgcact
gccctgcttgaggatacattcagacaacttaacaatgcagaccatgaaaacttcaaaaaa
actttagtggtaaagtttgtagaagaagacagactgacagacgttaacagacgggatttt
tttctccatgctttcaatgaacttttggctcctaagtcagggatgttcatatacaatgac
aaccaaacaatgatctggtttcctgccaagccaacacttgaattaaaacagtacttcctg
tttgggatcctctgtggcctagccctctgcagcaacaacatagtgcacatgccctttcct
ctggccttttataagaagctggtcaatgtaaagcctactctggacgatatgactgagttc
acccctgtgatcggaaagggtttgcattgcattcttcatgagtaccctgatgatgttgtt
gatgacttggacatctctttctgtgtgcactgggatggtgattatgtggaactggagtcc
cacgaaaatggacaatcggtgacaagttgtaacaagaagaagtttgtggaagcatatgta
gattacgcaatgaacaagtcggtggagagagtgtttaatgagtttaaaagaggattctac
aaagtgtgtattgaagatgtggtgaacttcttccagccggaggagctcagaggagtgatg
gtgggaacagaggaatatgactgggacacattcaaacagaatacaacatattttggacaa
taccatgagagacatcctactatcattgcattctgggaggtattcgaggagctgacacag
gagcaaaagaaagcctttctcttgtttctaacaggctgtgatcgtgtgcccgtccttggg
atggatcaggttaggatgactgtgttggaacgccctaactttacccagaaccacctgcct
gagtccctcacctgccattctcatttcatgcttcctccttatgaaagcaagcagcgtctg
gaagcaaaacttcttgaagcgataaaccacaaccgaggcttctggatagaagatgtatag
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