KEGG   Tachysurus fulvidraco (yellow catfish): 113642420
Entry
113642420         CDS       T08119                                 
Name
(RefSeq) ras-related protein Rab-33B
  KO
K07920  Ras-related protein Rab-33B
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113642420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfd04131]
    113642420
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113642420
   04031 GTP-binding proteins [BR:tfd04031]
    113642420
Membrane trafficking [BR:tfd04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    113642420
 Others
  Specific organelles associated proteins
   Auto phagosome
    113642420
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113642420
GTP-binding proteins [BR:tfd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    113642420
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU SRPRB MMR_HSR1 G-alpha ATP_bind_1 NPHP3_N AAA_22 AAA_16 PduV-EutP
Other DBs
NCBI-GeneID: 113642420
NCBI-ProteinID: XP_027001692
LinkDB
Position
4:complement(23520002..23522950)
AA seq 212 aa
MDSCEFWIPAICRTCKIIVLGDAGVGKTSLTHLYCTGKFPEKTDSTIGVDFRERLVHVGG
EKIKVQLWDTAGQERFRKCMVQHYYRNVHAVVFVYDVTNAASFRSLPFWMEECQQHMLGP
DVPRMLVANKADLVTVASTIEQARHLAEVHSMPFYLFSAKGGSKEQVDTIFSKLVLQASR
QRRKKPEPARSIKLPSKANAVEEKKEKWTCNC
NT seq 639 nt   +upstreamnt  +downstreamnt
atggactcgtgcgagttttggatcccagcgatatgtcgcacgtgtaaaataatcgtgctc
ggagacgccggtgtgggaaaaacgagcctcactcatctctactgcaccggaaagtttccc
gagaaaaccgactccaccatcggtgtggacttccgagagagactggtgcacgtggggggc
gagaaaatcaaggtgcagctgtgggacacagcaggtcaggagcgttttcggaagtgcatg
gtacaacactactaccgcaatgtacatgcggttgtatttgtgtacgatgtcactaatgcg
gcttcgttccgcagtctgcccttctggatggaggagtgtcagcaacacatgcttggacca
gatgtacctcgcatgctcgtggctaacaaggccgacttggtgactgtggcctcaaccatc
gagcaagcacggcacttagctgaggtccactctatgcccttctacctcttttcagctaaa
ggtggcagcaaagaacaggtggacaccattttcagcaaactggtactacaggcaagtagg
cagagaaggaaaaaaccagagccagccagaagtattaaacttccttcaaaagccaatgct
gtggaagagaaaaaggagaaatggacctgcaattgctga

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