Tachysurus fulvidraco (yellow catfish): 113642420
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Entry
113642420 CDS
T08119
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113642420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113642420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113642420
04031 GTP-binding proteins [BR:
tfd04031
]
113642420
Membrane trafficking [BR:
tfd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
113642420
Others
Specific organelles associated proteins
Auto phagosome
113642420
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113642420
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
113642420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
MMR_HSR1
G-alpha
ATP_bind_1
NPHP3_N
AAA_22
AAA_16
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
113642420
NCBI-ProteinID:
XP_027001692
LinkDB
All DBs
Position
4:complement(23520002..23522950)
Genome browser
AA seq
212 aa
AA seq
DB search
MDSCEFWIPAICRTCKIIVLGDAGVGKTSLTHLYCTGKFPEKTDSTIGVDFRERLVHVGG
EKIKVQLWDTAGQERFRKCMVQHYYRNVHAVVFVYDVTNAASFRSLPFWMEECQQHMLGP
DVPRMLVANKADLVTVASTIEQARHLAEVHSMPFYLFSAKGGSKEQVDTIFSKLVLQASR
QRRKKPEPARSIKLPSKANAVEEKKEKWTCNC
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtgcgagttttggatcccagcgatatgtcgcacgtgtaaaataatcgtgctc
ggagacgccggtgtgggaaaaacgagcctcactcatctctactgcaccggaaagtttccc
gagaaaaccgactccaccatcggtgtggacttccgagagagactggtgcacgtggggggc
gagaaaatcaaggtgcagctgtgggacacagcaggtcaggagcgttttcggaagtgcatg
gtacaacactactaccgcaatgtacatgcggttgtatttgtgtacgatgtcactaatgcg
gcttcgttccgcagtctgcccttctggatggaggagtgtcagcaacacatgcttggacca
gatgtacctcgcatgctcgtggctaacaaggccgacttggtgactgtggcctcaaccatc
gagcaagcacggcacttagctgaggtccactctatgcccttctacctcttttcagctaaa
ggtggcagcaaagaacaggtggacaccattttcagcaaactggtactacaggcaagtagg
cagagaaggaaaaaaccagagccagccagaagtattaaacttccttcaaaagccaatgct
gtggaagagaaaaaggagaaatggacctgcaattgctga
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integrated database retrieval system