Tachysurus fulvidraco (yellow catfish): 113642576
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Entry
113642576 CDS
T08119
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113642576 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113642576 (fip1l1a)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113642576 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
SRCR_2
Motif
Other DBs
NCBI-GeneID:
113642576
NCBI-ProteinID:
XP_027001953
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All DBs
Position
16:4123828..4153724
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AA seq
470 aa
AA seq
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MSTGETEKTTVYISPDDEDWLYGDNNNDVDDDVGDDDDKKTETEIFSALVGDVEGDGADN
QDVEAGGETESDDNLRVTIGSIKTDTIQSTNTTVNLKNSDITTVSGTKVRGVTLVVLDSN
TGTPALGVNEELEEKPWRKPGADLSDYFNYGFNEDTWKSYCDKHRRLRMSLEFMKLGSSA
KNTDTHNALLSKSDCSSGKLKSTIDVIEGQAETIIRVEGRRNHSTDGSITQVQSSSEQPV
HAEPLSTNLPPFFPPIIPPPPFPLLSISSTPPFVQQLPRPSMSVPPPGFPLPPEVPFTSS
SGRSGGSYDVRCAPPYPFAAGVYPHTPRHMTPWPGLSEHAKAWNYSSCQDTDRDRGKDRE
KTREREAKTEQEKERDQENTPSSQSRSSDRERASRHRDHSERERARHREHDREGREREER
HRDRRHRDRNERHKSSRSSSRRSDDGDSHRRHRYKRSKHNKDKTDSESTD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggggaaacggaaaaaacgacagtttacattagtccggatgacgaggactgg
ctttacggagacaacaacaacgatgtggacgatgacgttggtgatgatgacgataagaag
acagagactgaaattttcagtgctctggttggagatgtggaaggagatggagcggataat
caggatgtcgaagcaggcggcgagacggaaagtgacgacaacttgcgtgttaccatcggc
agcatcaaaacagatacgatccagagcactaacacgactgtcaatctcaagaactcagac
ataaccacagtgtcaggcaccaaggtcagaggggtgactctggttgtattggacagcaac
actggtactccagcactgggggtaaatgaagagctagaggagaagccttggagaaaacca
ggtgcagacctgtcagactatttcaactacggcttcaacgaggacacctggaagtcatat
tgtgacaaacacaggagactgcgcatgagcctagagttcatgaagttagggtcatctgcc
aaaaacacggatactcacaatgcgctcctctctaaatcagattgctcctccgggaagttg
aaaagcaccatcgatgtaatcgaagggcaagcagagaccatcattcgcgtggaagggcga
agaaatcacagtacagatggaagcataacgcaggtgcagtcttcttccgaacagcccgtg
catgctgagccgctatccactaacttgcctccttttttcccccccatcattcctcctcca
ccttttcctcttctctccatcagcagcactcctccttttgtacaacagctcccacgaccg
tctatgagtgtgccaccacccggttttccactccctcctgaagttccttttacatcaagc
agtggccggtcgggaggaagctacgatgtccgctgtgccccgccgtatcccttcgctgca
ggtgtgtatccacacactccgaggcacatgaccccatggccgggcttgagcgagcatgca
aaagcgtggaattattccagctgccaggacacagacagagaccgagggaaggacagagag
aagactcgggaacgagaggccaagaccgagcaggagaaagagcgcgatcaggagaacacg
ccctcgtctcagagccgcagcagtgaccgagagcgtgcctcacgtcacagggaccacagc
gagcgcgagagagcaagacatcgggagcacgatagagaagggagagaaagagaagagcgg
catcgtgacaggagacacagggaccgcaacgagagacacaaatcctcacgcagcagcagt
cggagaagcgatgacggagacagccacaggagacaccggtacaagcgctccaaacacaac
aaggacaagacagacagcgagtccactgactga
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