KEGG   Tachysurus fulvidraco (yellow catfish): 113642822
Entry
113642822         CDS       T08119                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137  Mitophagy - animal
tfd04140  Autophagy - animal
tfd04144  Endocytosis
tfd04145  Phagosome
tfd04148  Efferocytosis
tfd05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113642822
   04145 Phagosome
    113642822
   04140 Autophagy - animal
    113642822
   04137 Mitophagy - animal
    113642822
   04148 Efferocytosis
    113642822
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113642822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfd04131]
    113642822
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113642822
   04031 GTP-binding proteins [BR:tfd04031]
    113642822
Membrane trafficking [BR:tfd04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    113642822
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113642822
  Exosomal proteins of other body fluids (saliva and urine)
   113642822
  Exosomal proteins of colorectal cancer cells
   113642822
  Exosomal proteins of bladder cancer cells
   113642822
GTP-binding proteins [BR:tfd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    113642822
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW nSTAND3 PduV-EutP Septin AAA_16 NTPase_1 AAA_7 AAA_24 AAA_22 AAA_5 ATPase_2 NACHT NB-ARC ABC_tran AAA_14 ATP-synt_ab Peptidase_M9
Other DBs
NCBI-GeneID: 113642822
NCBI-ProteinID: XP_027002309
LinkDB
Position
5:complement(15534604..15539331)
AA seq 207 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAHGTFKTLDSWRDEFLIQAGPRDPDNFPF
LVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETDL
DTGIEIPDQIKLDRNDISSSSEQSCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcatcaaggaagaaagttcttctaaaagtcattattcttggggattcaggagttgga
aagacgtctttaatgaaccagtatgttaacaagaaattcagtaatcagtacaaagctaca
ataggagctgacttccttacaaaggaggtgatggttgaggacagacttgttactttgcag
atttgggacacagctggacaggaaaggtttcagtctcttggggtcgcgttttatcgaggt
gctgactgctgtgtgctggtattcgatgttactgctcatggcacatttaagacactggat
tcctggagagatgagtttttgattcaggctggtcctcgtgacccagacaacttccctttc
ctggtcctaggcaacaagattgacctggaaaacaggcaggtgacaacaaagcgggcacag
gcatggtgtcagagtaaaaacaatattccatactttgaaaccagcgcaaaggaggccatc
aatgttgaacaggcatttcaaaccattgcacgtaatgctttaaaacaggaaacagacctt
gatacaggtattgaaattccagatcagattaagttggacagaaatgacatctccagctca
tctgaacaaagctgtagctgctaa

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